EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAFG00000017531 (Gene tree)
Gene ID: 489966
Gene Symbol: TNRC6A
Alias: -
Full Name: trinucleotide repeat containing 6A
Gene Type: protein_coding
Species: Canis_familiaris
Status: putative
Strand: Minus strand
Length: 106867 bases
Position: chr6:21247417-21354283
Accession: 47699
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00000025858	Ago_hook	PF10427.9	1.4e-19	1	1
ENSCAFP00000042730	Ago_hook	PF10427.9	2.4e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00000045503	-	8327	XM_005621403	ENSCAFP00000042730	1882 (aa)	XP_005621460	J9PAE6
ENSCAFT00000027808	-	5871	XM_005621399	ENSCAFP00000025858	1957 (aa)	XP_005621456	F1PMK2

Gene Model

Click here to download ENSCAFG00000017531's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00000017531's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAFG00000017531	TNRC6A	98	42.731	ENSCAFG00000005224	TNRC6C	99	43.229
ENSCAFG00000017531	TNRC6A	97	36.760	ENSCAFG00000001255	TNRC6B	99	42.699

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00000017531	TNRC6A	100	96.585	ENSG00000090905	TNRC6A	99	96.585	Homo_sapiens
ENSCAFG00000017531	TNRC6A	98	98.589	ENSAMEG00000009333	TNRC6A	100	98.589	Ailuropoda_melanoleuca
ENSCAFG00000017531	TNRC6A	97	82.368	ENSAPLG00000009978	TNRC6A	100	82.368	Anas_platyrhynchos
ENSCAFG00000017531	TNRC6A	100	54.620	ENSACAG00000011857	TNRC6A	99	56.704	Anolis_carolinensis
ENSCAFG00000017531	TNRC6A	100	96.328	ENSANAG00000025252	TNRC6A	99	96.328	Aotus_nancymaae
ENSCAFG00000017531	TNRC6A	92	57.326	ENSAMXG00000019919	tnrc6a	99	57.284	Astyanax_mexicanus
ENSCAFG00000017531	TNRC6A	100	95.911	ENSBTAG00000017999	TNRC6A	99	96.166	Bos_taurus
ENSCAFG00000017531	TNRC6A	100	96.136	ENSCJAG00000020677	TNRC6A	99	96.136	Callithrix_jacchus
ENSCAFG00000017531	TNRC6A	99	97.869	ENSCAFG00020021160	TNRC6A	100	97.869	Canis_lupus_dingo
ENSCAFG00000017531	TNRC6A	100	95.909	ENSCHIG00000019448	TNRC6A	99	95.909	Capra_hircus
ENSCAFG00000017531	TNRC6A	100	96.272	ENSTSYG00000012711	TNRC6A	99	96.272	Carlito_syrichta
ENSCAFG00000017531	TNRC6A	99	95.274	ENSCPOG00000036684	TNRC6A	98	95.274	Cavia_porcellus
ENSCAFG00000017531	TNRC6A	100	96.478	ENSCCAG00000033664	TNRC6A	99	96.478	Cebus_capucinus
ENSCAFG00000017531	TNRC6A	100	96.302	ENSCATG00000019284	TNRC6A	99	96.302	Cercocebus_atys
ENSCAFG00000017531	TNRC6A	99	91.300	ENSCLAG00000010217	TNRC6A	97	91.300	Chinchilla_lanigera
ENSCAFG00000017531	TNRC6A	100	96.682	ENSCSAG00000006561	TNRC6A	99	96.682	Chlorocebus_sabaeus
ENSCAFG00000017531	TNRC6A	95	91.763	ENSCHOG00000009374	TNRC6A	95	91.763	Choloepus_hoffmanni
ENSCAFG00000017531	TNRC6A	92	82.679	ENSCPBG00000001881	TNRC6A	99	82.679	Chrysemys_picta_bellii
ENSCAFG00000017531	TNRC6A	100	96.835	ENSCANG00000041549	TNRC6A	99	96.835	Colobus_angolensis_palliatus
ENSCAFG00000017531	TNRC6A	99	93.827	ENSCGRG00001015021	Tnrc6a	99	93.881	Cricetulus_griseus_chok1gshd
ENSCAFG00000017531	TNRC6A	99	93.107	ENSCGRG00000013351	Tnrc6a	97	92.892	Cricetulus_griseus_crigri
ENSCAFG00000017531	TNRC6A	92	57.071	ENSDARG00000079688	tnrc6a	99	57.103	Danio_rerio
ENSCAFG00000017531	TNRC6A	98	93.629	ENSDNOG00000013989	TNRC6A	99	93.629	Dasypus_novemcinctus
ENSCAFG00000017531	TNRC6A	99	84.712	ENSETEG00000014658	TNRC6A	99	85.497	Echinops_telfairi
ENSCAFG00000017531	TNRC6A	100	96.731	ENSEASG00005017693	TNRC6A	99	97.225	Equus_asinus_asinus
ENSCAFG00000017531	TNRC6A	100	96.731	ENSECAG00000025056	TNRC6A	100	96.739	Equus_caballus
ENSCAFG00000017531	TNRC6A	98	89.812	ENSEEUG00000004530	TNRC6A	99	89.760	Erinaceus_europaeus
ENSCAFG00000017531	TNRC6A	100	96.679	ENSFCAG00000025236	TNRC6A	100	96.686	Felis_catus
ENSCAFG00000017531	TNRC6A	100	79.104	ENSFALG00000003757	TNRC6A	99	80.050	Ficedula_albicollis
ENSCAFG00000017531	TNRC6A	92	82.997	ENSGALG00000006068	TNRC6A	99	83.401	Gallus_gallus
ENSCAFG00000017531	TNRC6A	92	82.059	ENSGAGG00000023209	TNRC6A	99	82.346	Gopherus_agassizii
ENSCAFG00000017531	TNRC6A	100	96.501	ENSGGOG00000005137	TNRC6A	99	96.607	Gorilla_gorilla
ENSCAFG00000017531	TNRC6A	98	93.629	ENSHGLG00000012474	-	100	90.783	Heterocephalus_glaber_female
ENSCAFG00000017531	TNRC6A	96	74.213	ENSHGLG00000007368	-	99	69.459	Heterocephalus_glaber_female
ENSCAFG00000017531	TNRC6A	98	93.344	ENSHGLG00100012496	-	100	90.579	Heterocephalus_glaber_male
ENSCAFG00000017531	TNRC6A	100	95.316	ENSSTOG00000023394	TNRC6A	99	95.367	Ictidomys_tridecemlineatus
ENSCAFG00000017531	TNRC6A	97	69.954	ENSLACG00000006277	TNRC6A	100	70.728	Latimeria_chalumnae
ENSCAFG00000017531	TNRC6A	100	83.223	ENSLOCG00000005517	tnrc6a	93	83.223	Lepisosteus_oculatus
ENSCAFG00000017531	TNRC6A	99	94.525	ENSLAFG00000004209	TNRC6A	99	94.683	Loxodonta_africana
ENSCAFG00000017531	TNRC6A	97	94.901	ENSMFAG00000003824	TNRC6A	99	94.901	Macaca_fascicularis
ENSCAFG00000017531	TNRC6A	100	96.580	ENSMMUG00000020428	TNRC6A	99	96.580	Macaca_mulatta
ENSCAFG00000017531	TNRC6A	100	96.289	ENSMNEG00000034854	TNRC6A	99	96.289	Macaca_nemestrina
ENSCAFG00000017531	TNRC6A	97	94.551	ENSMLEG00000042737	TNRC6A	97	94.292	Mandrillus_leucophaeus
ENSCAFG00000017531	TNRC6A	100	80.071	ENSMGAG00000006455	TNRC6A	99	80.637	Meleagris_gallopavo
ENSCAFG00000017531	TNRC6A	99	93.773	ENSMAUG00000012750	Tnrc6a	97	93.773	Mesocricetus_auratus
ENSCAFG00000017531	TNRC6A	100	96.607	ENSMICG00000030685	TNRC6A	99	96.658	Microcebus_murinus
ENSCAFG00000017531	TNRC6A	99	94.039	ENSMOCG00000000152	Tnrc6a	97	93.824	Microtus_ochrogaster
ENSCAFG00000017531	TNRC6A	100	81.281	ENSMODG00000016348	TNRC6A	99	82.423	Monodelphis_domestica
ENSCAFG00000017531	TNRC6A	99	92.589	MGP_CAROLIEiJ_G0030425	Tnrc6a	100	94.353	Mus_caroli
ENSCAFG00000017531	TNRC6A	99	92.965	ENSMUSG00000052707	Tnrc6a	99	94.639	Mus_musculus
ENSCAFG00000017531	TNRC6A	99	93.237	MGP_PahariEiJ_G0013635	Tnrc6a	100	94.925	Mus_pahari
ENSCAFG00000017531	TNRC6A	100	93.156	MGP_SPRETEiJ_G0031539	Tnrc6a	100	94.496	Mus_spretus
ENSCAFG00000017531	TNRC6A	99	85.806	ENSMPUG00000012324	TNRC6A	100	85.753	Mustela_putorius_furo
ENSCAFG00000017531	TNRC6A	97	93.592	ENSMLUG00000002701	TNRC6A	100	93.487	Myotis_lucifugus
ENSCAFG00000017531	TNRC6A	99	94.901	ENSNGAG00000020702	Tnrc6a	98	94.901	Nannospalax_galili
ENSCAFG00000017531	TNRC6A	99	94.244	ENSNLEG00000011851	TNRC6A	98	94.244	Nomascus_leucogenys
ENSCAFG00000017531	TNRC6A	77	89.590	ENSMEUG00000015959	-	77	89.590	Notamacropus_eugenii
ENSCAFG00000017531	TNRC6A	96	99.627	ENSOPRG00000005819	TNRC6A	96	99.627	Ochotona_princeps
ENSCAFG00000017531	TNRC6A	98	89.752	ENSODEG00000012802	TNRC6A	97	89.860	Octodon_degus
ENSCAFG00000017531	TNRC6A	87	83.546	ENSOANG00000007672	TNRC6A	99	83.547	Ornithorhynchus_anatinus
ENSCAFG00000017531	TNRC6A	97	92.917	ENSOCUG00000004325	TNRC6A	100	92.812	Oryctolagus_cuniculus
ENSCAFG00000017531	TNRC6A	99	96.708	ENSOGAG00000006666	TNRC6A	100	96.708	Otolemur_garnettii
ENSCAFG00000017531	TNRC6A	99	94.972	ENSOARG00000017950	TNRC6A	98	96.620	Ovis_aries
ENSCAFG00000017531	TNRC6A	100	95.882	ENSPPAG00000028379	TNRC6A	100	95.986	Pan_paniscus
ENSCAFG00000017531	TNRC6A	100	96.679	ENSPPRG00000005861	TNRC6A	99	96.679	Panthera_pardus
ENSCAFG00000017531	TNRC6A	99	95.204	ENSPTIG00000006346	TNRC6A	99	95.255	Panthera_tigris_altaica
ENSCAFG00000017531	TNRC6A	99	94.169	ENSPTRG00000007898	TNRC6A	99	95.573	Pan_troglodytes
ENSCAFG00000017531	TNRC6A	100	94.196	ENSPANG00000018523	TNRC6A	99	94.196	Papio_anubis
ENSCAFG00000017531	TNRC6A	88	75.862	ENSPKIG00000012859	tnrc6a	99	75.862	Paramormyrops_kingsleyae
ENSCAFG00000017531	TNRC6A	78	78.311	ENSPSIG00000003965	TNRC6A	100	78.311	Pelodiscus_sinensis
ENSCAFG00000017531	TNRC6A	99	93.716	ENSPEMG00000016318	Tnrc6a	98	93.394	Peromyscus_maniculatus_bairdii
ENSCAFG00000017531	TNRC6A	99	83.076	ENSPCIG00000012106	TNRC6A	100	84.257	Phascolarctos_cinereus
ENSCAFG00000017531	TNRC6A	99	95.973	ENSPPYG00000007202	TNRC6A	100	95.973	Pongo_abelii
ENSCAFG00000017531	TNRC6A	95	100.000	ENSPCAG00000008260	TNRC6A	94	100.000	Procavia_capensis
ENSCAFG00000017531	TNRC6A	100	94.337	ENSPCOG00000010134	TNRC6A	99	94.337	Propithecus_coquereli
ENSCAFG00000017531	TNRC6A	89	71.347	ENSPVAG00000012066	TNRC6A	99	71.347	Pteropus_vampyrus
ENSCAFG00000017531	TNRC6A	99	92.937	ENSRNOG00000024737	Tnrc6a	98	92.887	Rattus_norvegicus
ENSCAFG00000017531	TNRC6A	100	96.654	ENSRBIG00000014222	TNRC6A	100	96.739	Rhinopithecus_bieti
ENSCAFG00000017531	TNRC6A	100	96.731	ENSRROG00000032360	TNRC6A	99	96.731	Rhinopithecus_roxellana
ENSCAFG00000017531	TNRC6A	98	95.711	ENSSBOG00000036197	TNRC6A	100	97.250	Saimiri_boliviensis_boliviensis
ENSCAFG00000017531	TNRC6A	92	84.160	ENSSHAG00000008811	TNRC6A	99	84.615	Sarcophilus_harrisii
ENSCAFG00000017531	TNRC6A	87	67.665	ENSSFOG00015008920	tnrc6a	99	67.669	Scleropages_formosus
ENSCAFG00000017531	TNRC6A	72	83.877	ENSSARG00000002479	TNRC6A	89	84.239	Sorex_araneus
ENSCAFG00000017531	TNRC6A	91	78.756	ENSSPUG00000010525	TNRC6A	100	79.059	Sphenodon_punctatus
ENSCAFG00000017531	TNRC6A	100	96.453	ENSSSCG00000038870	TNRC6A	100	97.892	Sus_scrofa
ENSCAFG00000017531	TNRC6A	99	80.214	ENSTGUG00000006142	TNRC6A	100	78.466	Taeniopygia_guttata
ENSCAFG00000017531	TNRC6A	98	93.887	ENSTBEG00000014965	TNRC6A	99	93.832	Tupaia_belangeri
ENSCAFG00000017531	TNRC6A	94	98.274	ENSTTRG00000002008	TNRC6A	93	98.274	Tursiops_truncatus
ENSCAFG00000017531	TNRC6A	80	97.738	ENSUAMG00000006656	-	93	97.738	Ursus_americanus
ENSCAFG00000017531	TNRC6A	98	97.455	ENSUMAG00000008274	TNRC6A	100	99.156	Ursus_maritimus
ENSCAFG00000017531	TNRC6A	57	85.990	ENSVPAG00000010764	-	57	85.990	Vicugna_pacos
ENSCAFG00000017531	TNRC6A	100	99.575	ENSVVUG00000005380	TNRC6A	100	99.586	Vulpes_vulpes
ENSCAFG00000017531	TNRC6A	94	65.667	ENSXETG00000030437	TNRC6A	99	66.128	Xenopus_tropicalis