EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAFG00000017532 (Gene tree)
Gene ID: 480571
Gene Symbol: SEPT4
Alias: -
Full Name: septin 4
Gene Type: protein_coding
Species: Canis_familiaris
Status: putative
Strand: Minus strand
Length: 24424 bases
Position: chr9:33136702-33161125
Accession: 55818
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00000025840	MMR_HSR1	PF01926.23	1.9e-07	1	1
ENSCAFP00000025842	MMR_HSR1	PF01926.23	1.4e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00000027792	-	3042	XM_003435278	ENSCAFP00000025842	1013 (aa)	XP_003435326	F1PML1
ENSCAFT00000027790	-	2704	XM_005624725	ENSCAFP00000025840	360 (aa)	XP_005624784	E2R9P3

Gene Model

Click here to download ENSCAFG00000017532's gene model file

Pathways

Pathway ID	Pathway Name	Source
cfa04210	Apoptosis	KEGG
cfa04215	Apoptosis - multiple species	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00000017532's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAFG00000017532	SEPT4	82	47.138	ENSCAFG00000005190	SEPT9	51	47.138
ENSCAFG00000017532	SEPT4	96	60.756	ENSCAFG00000012960	SEPT2	93	60.227
ENSCAFG00000017532	SEPT4	97	65.341	ENSCAFG00000016576	SEPT1	97	64.722
ENSCAFG00000017532	SEPT4	79	56.338	ENSCAFG00000003216	SEPT7	73	56.338
ENSCAFG00000017532	SEPT4	81	41.497	ENSCAFG00000006087	-	73	41.497
ENSCAFG00000017532	SEPT4	80	51.903	ENSCAFG00000000995	SEPT3	87	49.216
ENSCAFG00000017532	SEPT4	96	78.161	ENSCAFG00000014533	SEPT5	92	78.151
ENSCAFG00000017532	SEPT4	80	44.792	ENSCAFG00000019171	SEPT12	80	44.792

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00000017532	SEPT4	99	98.050	ENSCATG00000032851	-	99	96.644	Cercocebus_atys
ENSCAFG00000017532	SEPT4	99	100.000	ENSECAG00000020248	-	96	100.000	Equus_caballus
ENSCAFG00000017532	SEPT4	99	97.772	ENSGGOG00000013814	-	99	96.644	Gorilla_gorilla
ENSCAFG00000017532	SEPT4	99	98.050	ENSMFAG00000038431	SEPT4	99	96.644	Macaca_fascicularis
ENSCAFG00000017532	SEPT4	99	98.050	ENSMMUG00000008423	-	99	96.644	Macaca_mulatta
ENSCAFG00000017532	SEPT4	99	98.050	ENSMNEG00000036497	-	99	94.760	Macaca_nemestrina
ENSCAFG00000017532	SEPT4	99	98.050	ENSMLEG00000026740	-	100	98.023	Mandrillus_leucophaeus
ENSCAFG00000017532	SEPT4	99	99.443	ENSMPUG00000015285	-	100	86.871	Mustela_putorius_furo
ENSCAFG00000017532	SEPT4	99	98.050	ENSNLEG00000008245	-	98	97.952	Nomascus_leucogenys
ENSCAFG00000017532	SEPT4	99	98.329	ENSOARG00000010822	-	100	77.833	Ovis_aries
ENSCAFG00000017532	SEPT4	99	97.772	ENSPPAG00000028255	-	98	97.270	Pan_paniscus
ENSCAFG00000017532	SEPT4	99	97.772	ENSPTRG00000009455	SEPT4	98	97.270	Pan_troglodytes