EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAFG00000017551 (Gene tree)
Gene ID: 492015
Gene Symbol: CSTF2
Alias: -
Full Name: cleavage stimulation factor subunit 2
Gene Type: protein_coding
Species: Canis_familiaris
Status: putative
Strand: Plus strand
Length: 20827 bases
Position: chrX:74758496-74779322
Accession: 39683
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00000037881	RRM_1	PF00076.22	1.2e-25	1	1
ENSCAFP00000025876	RRM_1	PF00076.22	1.4e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00000049845	-	2973	-	ENSCAFP00000037881	509 (aa)	-	J9NX69
ENSCAFT00000027826	-	1731	XM_005641557	ENSCAFP00000025876	577 (aa)	XP_005641614	E2RP40

Gene Model

Click here to download ENSCAFG00000017551's gene model file

Pathways

Pathway ID	Pathway Name	Source
cfa03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00000017551's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAFG00000017551	CSTF2	99	62.500	ENSCAFG00000015567	CSTF2T	99	60.590

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00000017551	CSTF2	100	96.360	ENSG00000101811	CSTF2	100	96.360	Homo_sapiens
ENSCAFG00000017551	CSTF2	99	59.316	ENSAPOG00000005630	cstf2	97	60.342	Acanthochromis_polyacanthus
ENSCAFG00000017551	CSTF2	100	93.874	ENSAMEG00000002082	CSTF2	100	93.874	Ailuropoda_melanoleuca
ENSCAFG00000017551	CSTF2	99	56.110	ENSACIG00000012852	cstf2	96	57.812	Amphilophus_citrinellus
ENSCAFG00000017551	CSTF2	99	59.691	ENSAOCG00000020905	cstf2	97	60.513	Amphiprion_ocellaris
ENSCAFG00000017551	CSTF2	99	59.691	ENSAPEG00000006526	cstf2	97	60.513	Amphiprion_percula
ENSCAFG00000017551	CSTF2	99	58.520	ENSATEG00000018186	cstf2	96	58.974	Anabas_testudineus
ENSCAFG00000017551	CSTF2	97	76.061	ENSAPLG00000007255	CSTF2	98	75.798	Anas_platyrhynchos
ENSCAFG00000017551	CSTF2	100	95.147	ENSANAG00000022342	CSTF2	100	95.147	Aotus_nancymaae
ENSCAFG00000017551	CSTF2	80	65.721	ENSACLG00000000779	cstf2	93	61.063	Astatotilapia_calliptera
ENSCAFG00000017551	CSTF2	92	80.784	ENSAMXG00000021477	cstf2	96	98.413	Astyanax_mexicanus
ENSCAFG00000017551	CSTF2	100	96.360	ENSBTAG00000003547	CSTF2	100	96.360	Bos_taurus
ENSCAFG00000017551	CSTF2	100	95.494	ENSCJAG00000004422	CSTF2	100	95.494	Callithrix_jacchus
ENSCAFG00000017551	CSTF2	100	100.000	ENSCAFG00020007619	CSTF2	100	100.000	Canis_lupus_dingo
ENSCAFG00000017551	CSTF2	100	96.014	ENSCHIG00000016994	CSTF2	100	96.014	Capra_hircus
ENSCAFG00000017551	CSTF2	100	96.187	ENSTSYG00000006529	CSTF2	100	96.187	Carlito_syrichta
ENSCAFG00000017551	CSTF2	100	94.627	ENSCPOG00000015255	CSTF2	100	94.627	Cavia_porcellus
ENSCAFG00000017551	CSTF2	100	95.494	ENSCCAG00000032975	CSTF2	100	95.494	Cebus_capucinus
ENSCAFG00000017551	CSTF2	100	96.187	ENSCATG00000022835	CSTF2	100	96.187	Cercocebus_atys
ENSCAFG00000017551	CSTF2	100	94.627	ENSCLAG00000001904	CSTF2	100	94.627	Chinchilla_lanigera
ENSCAFG00000017551	CSTF2	100	93.132	ENSCSAG00000010360	CSTF2	100	93.132	Chlorocebus_sabaeus
ENSCAFG00000017551	CSTF2	68	100.000	ENSCHOG00000012803	CSTF2	75	100.000	Choloepus_hoffmanni
ENSCAFG00000017551	CSTF2	100	76.565	ENSCPBG00000014293	CSTF2	100	76.312	Chrysemys_picta_bellii
ENSCAFG00000017551	CSTF2	100	96.360	ENSCANG00000030612	CSTF2	100	96.360	Colobus_angolensis_palliatus
ENSCAFG00000017551	CSTF2	100	91.724	ENSCGRG00001023023	Cstf2	100	91.724	Cricetulus_griseus_chok1gshd
ENSCAFG00000017551	CSTF2	100	88.793	ENSCGRG00000003897	Cstf2	100	88.793	Cricetulus_griseus_crigri
ENSCAFG00000017551	CSTF2	99	62.019	ENSCVAG00000005731	cstf2	96	60.727	Cyprinodon_variegatus
ENSCAFG00000017551	CSTF2	71	98.182	ENSDARG00000090788	cstf2	93	92.188	Danio_rerio
ENSCAFG00000017551	CSTF2	100	91.710	ENSDORG00000007195	Cstf2	100	91.710	Dipodomys_ordii
ENSCAFG00000017551	CSTF2	72	94.595	ENSETEG00000004931	CSTF2	68	94.595	Echinops_telfairi
ENSCAFG00000017551	CSTF2	100	93.802	ENSEASG00005001216	CSTF2	100	93.802	Equus_asinus_asinus
ENSCAFG00000017551	CSTF2	100	97.054	ENSECAG00000009325	CSTF2	100	97.054	Equus_caballus
ENSCAFG00000017551	CSTF2	100	97.747	ENSFCAG00000007000	CSTF2	100	97.747	Felis_catus
ENSCAFG00000017551	CSTF2	92	74.645	ENSFALG00000003859	CSTF2	100	75.000	Ficedula_albicollis
ENSCAFG00000017551	CSTF2	100	94.801	ENSFDAG00000002416	CSTF2	100	94.801	Fukomys_damarensis
ENSCAFG00000017551	CSTF2	99	59.619	ENSFHEG00000017065	cstf2	93	60.410	Fundulus_heteroclitus
ENSCAFG00000017551	CSTF2	99	53.793	ENSGMOG00000005145	cstf2	99	56.897	Gadus_morhua
ENSCAFG00000017551	CSTF2	100	79.181	ENSGALG00000006760	CSTF2	100	79.522	Gallus_gallus
ENSCAFG00000017551	CSTF2	99	56.282	ENSGACG00000017326	cstf2	94	81.633	Gasterosteus_aculeatus
ENSCAFG00000017551	CSTF2	100	78.583	ENSGAGG00000006037	CSTF2	100	78.467	Gopherus_agassizii
ENSCAFG00000017551	CSTF2	100	96.360	ENSGGOG00000022267	CSTF2	100	96.360	Gorilla_gorilla
ENSCAFG00000017551	CSTF2	80	65.105	ENSHBUG00000016183	cstf2	93	60.653	Haplochromis_burtoni
ENSCAFG00000017551	CSTF2	100	80.589	ENSHGLG00000013455	-	100	80.589	Heterocephalus_glaber_female
ENSCAFG00000017551	CSTF2	100	95.147	ENSHGLG00000000659	-	100	95.147	Heterocephalus_glaber_female
ENSCAFG00000017551	CSTF2	100	80.763	ENSHGLG00100015391	-	100	80.763	Heterocephalus_glaber_male
ENSCAFG00000017551	CSTF2	100	95.147	ENSHGLG00100001130	-	100	95.147	Heterocephalus_glaber_male
ENSCAFG00000017551	CSTF2	99	60.241	ENSHCOG00000005157	cstf2	97	60.900	Hippocampus_comes
ENSCAFG00000017551	CSTF2	81	69.789	ENSIPUG00000017839	cstf2	99	58.362	Ictalurus_punctatus
ENSCAFG00000017551	CSTF2	100	95.147	ENSSTOG00000023445	CSTF2	100	95.147	Ictidomys_tridecemlineatus
ENSCAFG00000017551	CSTF2	100	93.241	ENSJJAG00000020507	Cstf2	100	93.241	Jaculus_jaculus
ENSCAFG00000017551	CSTF2	54	94.915	ENSLBEG00000028720	cstf2	83	89.062	Labrus_bergylta
ENSCAFG00000017551	CSTF2	99	66.121	ENSLACG00000015927	CSTF2	99	65.097	Latimeria_chalumnae
ENSCAFG00000017551	CSTF2	99	66.265	ENSLOCG00000015300	cstf2	93	65.470	Lepisosteus_oculatus
ENSCAFG00000017551	CSTF2	100	93.241	ENSLAFG00000000474	CSTF2	100	93.241	Loxodonta_africana
ENSCAFG00000017551	CSTF2	100	96.360	ENSMFAG00000043888	CSTF2	100	96.360	Macaca_fascicularis
ENSCAFG00000017551	CSTF2	97	95.730	ENSMMUG00000013008	CSTF2	99	95.730	Macaca_mulatta
ENSCAFG00000017551	CSTF2	100	96.360	ENSMNEG00000041824	CSTF2	100	96.360	Macaca_nemestrina
ENSCAFG00000017551	CSTF2	100	96.360	ENSMLEG00000036870	CSTF2	100	96.360	Mandrillus_leucophaeus
ENSCAFG00000017551	CSTF2	97	58.025	ENSMAMG00000020364	cstf2	96	59.717	Mastacembelus_armatus
ENSCAFG00000017551	CSTF2	80	65.721	ENSMZEG00005007200	cstf2	96	61.063	Maylandia_zebra
ENSCAFG00000017551	CSTF2	90	76.957	ENSMGAG00000004139	CSTF2	88	90.541	Meleagris_gallopavo
ENSCAFG00000017551	CSTF2	100	91.897	ENSMAUG00000000965	Cstf2	100	91.897	Mesocricetus_auratus
ENSCAFG00000017551	CSTF2	100	95.147	ENSMICG00000014121	CSTF2	100	95.147	Microcebus_murinus
ENSCAFG00000017551	CSTF2	100	90.517	ENSMOCG00000008081	Cstf2	100	90.517	Microtus_ochrogaster
ENSCAFG00000017551	CSTF2	99	58.435	ENSMMOG00000000538	cstf2	97	55.043	Mola_mola
ENSCAFG00000017551	CSTF2	100	77.265	ENSMODG00000011785	CSTF2	100	79.538	Monodelphis_domestica
ENSCAFG00000017551	CSTF2	100	92.069	MGP_CAROLIEiJ_G0033383	Cstf2	100	92.069	Mus_caroli
ENSCAFG00000017551	CSTF2	100	92.069	ENSMUSG00000031256	Cstf2	100	92.069	Mus_musculus
ENSCAFG00000017551	CSTF2	100	92.055	MGP_PahariEiJ_G0031923	Cstf2	100	92.228	Mus_pahari
ENSCAFG00000017551	CSTF2	100	92.069	MGP_SPRETEiJ_G0034548	Cstf2	100	92.069	Mus_spretus
ENSCAFG00000017551	CSTF2	100	89.841	ENSMPUG00000002339	CSTF2	100	89.841	Mustela_putorius_furo
ENSCAFG00000017551	CSTF2	100	86.645	ENSMLUG00000004598	CSTF2	98	86.645	Myotis_lucifugus
ENSCAFG00000017551	CSTF2	100	93.437	ENSNGAG00000021985	Cstf2	100	93.610	Nannospalax_galili
ENSCAFG00000017551	CSTF2	92	62.808	ENSNBRG00000021694	cstf2	100	55.595	Neolamprologus_brichardi
ENSCAFG00000017551	CSTF2	100	96.360	ENSNLEG00000007510	CSTF2	100	96.360	Nomascus_leucogenys
ENSCAFG00000017551	CSTF2	91	80.038	ENSMEUG00000014025	-	100	81.179	Notamacropus_eugenii
ENSCAFG00000017551	CSTF2	100	78.510	ENSMEUG00000007875	-	100	79.896	Notamacropus_eugenii
ENSCAFG00000017551	CSTF2	100	82.322	ENSMEUG00000011186	-	100	84.575	Notamacropus_eugenii
ENSCAFG00000017551	CSTF2	83	90.148	ENSOPRG00000003106	CSTF2	87	80.543	Ochotona_princeps
ENSCAFG00000017551	CSTF2	100	93.934	ENSODEG00000002059	CSTF2	100	93.934	Octodon_degus
ENSCAFG00000017551	CSTF2	89	80.000	ENSONIG00000002631	cstf2	99	55.505	Oreochromis_niloticus
ENSCAFG00000017551	CSTF2	97	77.572	ENSOANG00000004208	CSTF2	87	84.810	Ornithorhynchus_anatinus
ENSCAFG00000017551	CSTF2	100	93.241	ENSOCUG00000010468	CSTF2	100	93.241	Oryctolagus_cuniculus
ENSCAFG00000017551	CSTF2	86	80.000	ENSORLG00000001380	cstf2	97	58.291	Oryzias_latipes
ENSCAFG00000017551	CSTF2	86	80.408	ENSORLG00020021917	cstf2	97	58.632	Oryzias_latipes_hni
ENSCAFG00000017551	CSTF2	86	80.000	ENSORLG00015011996	cstf2	97	58.291	Oryzias_latipes_hsok
ENSCAFG00000017551	CSTF2	86	81.328	ENSOMEG00000015507	cstf2	97	59.556	Oryzias_melastigma
ENSCAFG00000017551	CSTF2	100	86.804	ENSOGAG00000011192	CSTF2	100	85.692	Otolemur_garnettii
ENSCAFG00000017551	CSTF2	100	96.014	ENSOARG00000001022	CSTF2	100	96.014	Ovis_aries
ENSCAFG00000017551	CSTF2	100	96.360	ENSPPAG00000031804	CSTF2	100	96.360	Pan_paniscus
ENSCAFG00000017551	CSTF2	100	97.920	ENSPPRG00000022492	CSTF2	100	97.920	Panthera_pardus
ENSCAFG00000017551	CSTF2	100	97.574	ENSPTIG00000009922	CSTF2	100	97.574	Panthera_tigris_altaica
ENSCAFG00000017551	CSTF2	100	96.360	ENSPTRG00000022090	CSTF2	100	96.360	Pan_troglodytes
ENSCAFG00000017551	CSTF2	100	96.360	ENSPANG00000002303	CSTF2	100	96.360	Papio_anubis
ENSCAFG00000017551	CSTF2	99	62.609	ENSPKIG00000005033	cstf2	97	60.832	Paramormyrops_kingsleyae
ENSCAFG00000017551	CSTF2	99	58.108	ENSPMGG00000006534	cstf2	97	58.784	Periophthalmus_magnuspinnatus
ENSCAFG00000017551	CSTF2	100	91.034	ENSPEMG00000019415	Cstf2	100	91.034	Peromyscus_maniculatus_bairdii
ENSCAFG00000017551	CSTF2	100	78.161	ENSPCIG00000002989	CSTF2	100	79.639	Phascolarctos_cinereus
ENSCAFG00000017551	CSTF2	58	71.726	ENSPREG00000011481	cstf2	97	60.929	Poecilia_reticulata
ENSCAFG00000017551	CSTF2	100	93.300	ENSPPYG00000020541	CSTF2	100	93.300	Pongo_abelii
ENSCAFG00000017551	CSTF2	100	95.494	ENSPCOG00000027744	CSTF2	100	95.494	Propithecus_coquereli
ENSCAFG00000017551	CSTF2	97	81.508	ENSPVAG00000008342	CSTF2	100	81.508	Pteropus_vampyrus
ENSCAFG00000017551	CSTF2	99	59.722	ENSPNAG00000018887	cstf2	97	60.764	Pygocentrus_nattereri
ENSCAFG00000017551	CSTF2	100	91.207	ENSRNOG00000048025	Cstf2	100	91.207	Rattus_norvegicus
ENSCAFG00000017551	CSTF2	100	94.801	ENSRBIG00000030745	CSTF2	100	94.801	Rhinopithecus_bieti
ENSCAFG00000017551	CSTF2	100	95.494	ENSRROG00000045042	CSTF2	100	95.494	Rhinopithecus_roxellana
ENSCAFG00000017551	CSTF2	100	95.494	ENSSBOG00000021649	CSTF2	100	95.494	Saimiri_boliviensis_boliviensis
ENSCAFG00000017551	CSTF2	99	84.615	ENSSHAG00000003681	CSTF2	92	80.207	Sarcophilus_harrisii
ENSCAFG00000017551	CSTF2	99	64.028	ENSSFOG00015006348	cstf2	97	63.419	Scleropages_formosus
ENSCAFG00000017551	CSTF2	93	80.085	ENSSPUG00000005288	-	98	80.085	Sphenodon_punctatus
ENSCAFG00000017551	CSTF2	100	96.014	ENSSSCG00000012486	CSTF2	100	96.014	Sus_scrofa
ENSCAFG00000017551	CSTF2	100	79.252	ENSTGUG00000002253	CSTF2	100	79.592	Taeniopygia_guttata
ENSCAFG00000017551	CSTF2	99	58.992	ENSTNIG00000016860	cstf2	99	59.328	Tetraodon_nigroviridis
ENSCAFG00000017551	CSTF2	53	100.000	ENSTBEG00000010029	-	69	100.000	Tupaia_belangeri
ENSCAFG00000017551	CSTF2	100	97.054	ENSTTRG00000013556	CSTF2	100	97.054	Tursiops_truncatus
ENSCAFG00000017551	CSTF2	100	97.766	ENSUAMG00000026605	CSTF2	100	97.766	Ursus_americanus
ENSCAFG00000017551	CSTF2	100	90.468	ENSUMAG00000012417	CSTF2	100	99.291	Ursus_maritimus
ENSCAFG00000017551	CSTF2	73	95.627	ENSVPAG00000006466	CSTF2	72	95.627	Vicugna_pacos
ENSCAFG00000017551	CSTF2	100	99.827	ENSVVUG00000004717	CSTF2	100	99.827	Vulpes_vulpes
ENSCAFG00000017551	CSTF2	82	87.143	ENSXETG00000009642	cstf2	87	87.143	Xenopus_tropicalis
ENSCAFG00000017551	CSTF2	99	56.326	ENSXCOG00000016436	cstf2	84	96.970	Xiphophorus_couchianus