EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSCAFG00000017584 (Gene tree)
Gene ID
476710
Gene Symbol
SMARCA4
Alias
-
Full Name
SWI/SNF related%2C matrix associated%2C actin dependent regulator of chromatin%2C subfamily a%2C member 4
Gene Type
protein_coding
Species
Canis_familiaris
Status
putative
Strand
Minus strand
Length
73726 bases
Position
chr20:50175884-50249609
Accession
46530
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCAFP00000025953ResIIIPF04851.151.5e-0911
ENSCAFP00000025953BRKPF07533.161.2e-1711
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCAFT00000027907-4920XM_005632870ENSCAFP000000259531614 (aa)XP_013977518E2RJ89
Gene Model
Click here to download ENSCAFG00000017584's gene model file
Pathways
Pathway IDPathway NameSource
cfa04714ThermogenesisKEGG
cfa05225Hepatocellular carcinomaKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00000017584's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSCAFG00000017584SMARCA49876.184ENSCAFG00000002013SMARCA29676.291
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCAFG00000017584SMARCA410099.752ENSG00000127616SMARCA410099.752Homo_sapiens
ENSCAFG00000017584SMARCA49584.102ENSAPOG00000004542SMARCA49883.623Acanthochromis_polyacanthus
ENSCAFG00000017584SMARCA47587.694ENSAPOG00000003509smarca4a9886.069Acanthochromis_polyacanthus
ENSCAFG00000017584SMARCA410095.471ENSAMEG00000010868SMARCA410095.471Ailuropoda_melanoleuca
ENSCAFG00000017584SMARCA49787.617ENSACIG00000021550smarca4a9887.107Amphilophus_citrinellus
ENSCAFG00000017584SMARCA49486.965ENSAOCG00000009450-9787.755Amphiprion_ocellaris
ENSCAFG00000017584SMARCA48985.823ENSAOCG00000019167smarca4a10086.257Amphiprion_ocellaris
ENSCAFG00000017584SMARCA48985.892ENSAPEG00000015559smarca4a10086.326Amphiprion_percula
ENSCAFG00000017584SMARCA410083.245ENSAPEG00000023108-9983.195Amphiprion_percula
ENSCAFG00000017584SMARCA49983.748ENSATEG00000001094-9589.985Anabas_testudineus
ENSCAFG00000017584SMARCA410087.203ENSATEG00000011524smarca4a10087.333Anabas_testudineus
ENSCAFG00000017584SMARCA49999.503ENSANAG00000036991SMARCA410096.363Aotus_nancymaae
ENSCAFG00000017584SMARCA49584.168ENSACLG00000008638-9883.281Astatotilapia_calliptera
ENSCAFG00000017584SMARCA49788.649ENSACLG00000000163smarca4a9887.992Astatotilapia_calliptera
ENSCAFG00000017584SMARCA49487.378ENSAMXG00000011238-9887.174Astyanax_mexicanus
ENSCAFG00000017584SMARCA410098.885ENSBTAG00000019220SMARCA410098.885Bos_taurus
ENSCAFG00000017584SMARCA410095.890ENSCJAG00000005936SMARCA410095.890Callithrix_jacchus
ENSCAFG00000017584SMARCA4100100.000ENSCAFG00020024620SMARCA499100.000Canis_lupus_dingo
ENSCAFG00000017584SMARCA410094.434ENSCHIG00000015318SMARCA410094.434Capra_hircus
ENSCAFG00000017584SMARCA410099.196ENSTSYG00000012966SMARCA410098.950Carlito_syrichta
ENSCAFG00000017584SMARCA49488.962ENSCAPG00000015932SMARCA49695.145Cavia_aperea
ENSCAFG00000017584SMARCA410098.947ENSCPOG00000015549SMARCA410098.947Cavia_porcellus
ENSCAFG00000017584SMARCA410095.933ENSCCAG00000031660SMARCA49995.933Cebus_capucinus
ENSCAFG00000017584SMARCA410099.752ENSCATG00000029530SMARCA410099.752Cercocebus_atys
ENSCAFG00000017584SMARCA410098.699ENSCLAG00000011946SMARCA410098.699Chinchilla_lanigera
ENSCAFG00000017584SMARCA410097.155ENSCPBG00000009994SMARCA410097.155Chrysemys_picta_bellii
ENSCAFG00000017584SMARCA410099.752ENSCANG00000036013SMARCA410099.752Colobus_angolensis_palliatus
ENSCAFG00000017584SMARCA410099.195ENSCGRG00001016732Smarca410099.195Cricetulus_griseus_chok1gshd
ENSCAFG00000017584SMARCA410099.195ENSCGRG00000017242Smarca410099.195Cricetulus_griseus_crigri
ENSCAFG00000017584SMARCA49686.860ENSCSEG00000014771smarca4a10087.020Cynoglossus_semilaevis
ENSCAFG00000017584SMARCA49786.951ENSCVAG00000006979smarca4a9986.712Cyprinodon_variegatus
ENSCAFG00000017584SMARCA49984.408ENSCVAG00000003018-9884.721Cyprinodon_variegatus
ENSCAFG00000017584SMARCA49284.207ENSDARG00000104339SMARCA49584.661Danio_rerio
ENSCAFG00000017584SMARCA410087.044ENSDARG00000077226smarca4a10087.226Danio_rerio
ENSCAFG00000017584SMARCA410089.884ENSDNOG00000048847SMARCA49399.049Dasypus_novemcinctus
ENSCAFG00000017584SMARCA48591.655ENSDORG00000002544Smarca49192.704Dipodomys_ordii
ENSCAFG00000017584SMARCA49487.063ENSETEG00000013361SMARCA49486.417Echinops_telfairi
ENSCAFG00000017584SMARCA410099.380ENSEASG00005006167SMARCA49899.380Equus_asinus_asinus
ENSCAFG00000017584SMARCA410099.442ENSECAG00000008334SMARCA410099.442Equus_caballus
ENSCAFG00000017584SMARCA410086.457ENSELUG00000010247smarca4a10084.643Esox_lucius
ENSCAFG00000017584SMARCA49977.409ENSELUG00000023232-9385.988Esox_lucius
ENSCAFG00000017584SMARCA410099.567ENSFCAG00000004894SMARCA410099.567Felis_catus
ENSCAFG00000017584SMARCA47497.733ENSFALG00000004208SMARCA49391.917Ficedula_albicollis
ENSCAFG00000017584SMARCA49298.851ENSFDAG00000012237SMARCA49798.851Fukomys_damarensis
ENSCAFG00000017584SMARCA49686.424ENSFHEG00000010182smarca4a10086.642Fundulus_heteroclitus
ENSCAFG00000017584SMARCA410084.386ENSFHEG00000007902-9884.847Fundulus_heteroclitus
ENSCAFG00000017584SMARCA49280.687ENSGMOG00000005756-8779.381Gadus_morhua
ENSCAFG00000017584SMARCA49381.040ENSGMOG00000002649smarca4a8781.882Gadus_morhua
ENSCAFG00000017584SMARCA47397.039ENSGALG00000047145SMARCA410097.039Gallus_gallus
ENSCAFG00000017584SMARCA49981.989ENSGAFG00000008827-9882.091Gambusia_affinis
ENSCAFG00000017584SMARCA49088.835ENSGAFG00000014900smarca4a9988.459Gambusia_affinis
ENSCAFG00000017584SMARCA49885.857ENSGACG00000006691smarca4a10085.462Gasterosteus_aculeatus
ENSCAFG00000017584SMARCA49980.591ENSGACG00000016033-9978.323Gasterosteus_aculeatus
ENSCAFG00000017584SMARCA410097.274ENSGAGG00000016757SMARCA410097.274Gopherus_agassizii
ENSCAFG00000017584SMARCA410099.752ENSGGOG00000009882SMARCA410099.752Gorilla_gorilla
ENSCAFG00000017584SMARCA410084.072ENSHBUG00000005447-9983.264Haplochromis_burtoni
ENSCAFG00000017584SMARCA410087.629ENSHBUG00000021172smarca4a10087.508Haplochromis_burtoni
ENSCAFG00000017584SMARCA410098.766ENSHGLG00000010519SMARCA410098.766Heterocephalus_glaber_female
ENSCAFG00000017584SMARCA410097.713ENSHGLG00100013774SMARCA410097.713Heterocephalus_glaber_male
ENSCAFG00000017584SMARCA49586.538ENSHCOG00000009510smarca4a9686.812Hippocampus_comes
ENSCAFG00000017584SMARCA49884.755ENSIPUG00000016346-9883.960Ictalurus_punctatus
ENSCAFG00000017584SMARCA410088.010ENSIPUG00000006107smarca4a10087.949Ictalurus_punctatus
ENSCAFG00000017584SMARCA410099.566ENSSTOG00000007939SMARCA410099.566Ictidomys_tridecemlineatus
ENSCAFG00000017584SMARCA410097.450ENSJJAG00000012877Smarca410097.450Jaculus_jaculus
ENSCAFG00000017584SMARCA410083.998ENSKMAG00000019518-9887.541Kryptolebias_marmoratus
ENSCAFG00000017584SMARCA410086.064ENSKMAG00000011931smarca4a10086.369Kryptolebias_marmoratus
ENSCAFG00000017584SMARCA49585.909ENSLBEG00000017383smarca4a7789.017Labrus_bergylta
ENSCAFG00000017584SMARCA49583.307ENSLBEG00000020655-8182.995Labrus_bergylta
ENSCAFG00000017584SMARCA45288.902ENSLACG00000015309SMARCA410088.397Latimeria_chalumnae
ENSCAFG00000017584SMARCA410087.956ENSLOCG00000007820smarca4a7992.508Lepisosteus_oculatus
ENSCAFG00000017584SMARCA410099.505ENSLAFG00000001433SMARCA410099.505Loxodonta_africana
ENSCAFG00000017584SMARCA410099.752ENSMFAG00000032146SMARCA49999.752Macaca_fascicularis
ENSCAFG00000017584SMARCA410099.752ENSMMUG00000012042SMARCA410099.752Macaca_mulatta
ENSCAFG00000017584SMARCA410099.504ENSMNEG00000028512SMARCA410099.504Macaca_nemestrina
ENSCAFG00000017584SMARCA410099.690ENSMLEG00000034976SMARCA410099.505Mandrillus_leucophaeus
ENSCAFG00000017584SMARCA410087.279ENSMAMG00000009256smarca4a10087.158Mastacembelus_armatus
ENSCAFG00000017584SMARCA49586.971ENSMAMG00000002841-9887.126Mastacembelus_armatus
ENSCAFG00000017584SMARCA410087.637ENSMZEG00005003889smarca4a10087.272Maylandia_zebra
ENSCAFG00000017584SMARCA49883.449ENSMZEG00005023861-9883.982Maylandia_zebra
ENSCAFG00000017584SMARCA410098.949ENSMAUG00000020731Smarca410098.949Mesocricetus_auratus
ENSCAFG00000017584SMARCA410099.443ENSMICG00000009806SMARCA410099.443Microcebus_murinus
ENSCAFG00000017584SMARCA410098.949ENSMOCG00000022209Smarca410098.949Microtus_ochrogaster
ENSCAFG00000017584SMARCA49585.449ENSMMOG00000007571smarca4a9885.723Mola_mola
ENSCAFG00000017584SMARCA410096.841ENSMODG00000006287SMARCA410096.841Monodelphis_domestica
ENSCAFG00000017584SMARCA49687.105ENSMALG00000003388smarca4a10086.951Monopterus_albus
ENSCAFG00000017584SMARCA48983.737ENSMALG00000021534-8390.720Monopterus_albus
ENSCAFG00000017584SMARCA410099.257MGP_CAROLIEiJ_G0031879Smarca410099.257Mus_caroli
ENSCAFG00000017584SMARCA410099.257ENSMUSG00000032187Smarca410099.257Mus_musculus
ENSCAFG00000017584SMARCA410098.761MGP_PahariEiJ_G0014745Smarca410098.761Mus_pahari
ENSCAFG00000017584SMARCA410099.257MGP_SPRETEiJ_G0033003Smarca410099.257Mus_spretus
ENSCAFG00000017584SMARCA410099.876ENSMPUG00000005711SMARCA410099.876Mustela_putorius_furo
ENSCAFG00000017584SMARCA410099.504ENSMLUG00000004491-10099.504Myotis_lucifugus
ENSCAFG00000017584SMARCA410098.699ENSNGAG00000021852Smarca410098.699Nannospalax_galili
ENSCAFG00000017584SMARCA49586.411ENSNBRG00000011457smarca4a9686.234Neolamprologus_brichardi
ENSCAFG00000017584SMARCA410093.560ENSNLEG00000012389SMARCA49893.560Nomascus_leucogenys
ENSCAFG00000017584SMARCA48093.103ENSOPRG00000000885-7893.281Ochotona_princeps
ENSCAFG00000017584SMARCA410095.882ENSODEG00000017127SMARCA410095.882Octodon_degus
ENSCAFG00000017584SMARCA410088.326ENSONIG00000008196smarca4a10088.279Oreochromis_niloticus
ENSCAFG00000017584SMARCA410084.132ENSONIG00000018040-10083.323Oreochromis_niloticus
ENSCAFG00000017584SMARCA49991.283ENSOCUG00000001787SMARCA49991.283Oryctolagus_cuniculus
ENSCAFG00000017584SMARCA49686.211ENSORLG00000015452smarca4a10085.732Oryzias_latipes
ENSCAFG00000017584SMARCA49583.553ENSORLG00000003955-9787.619Oryzias_latipes
ENSCAFG00000017584SMARCA49583.553ENSORLG00020009728-9787.803Oryzias_latipes_hni
ENSCAFG00000017584SMARCA410085.784ENSORLG00020004611smarca4a10085.714Oryzias_latipes_hni
ENSCAFG00000017584SMARCA49983.253ENSORLG00015007739-9982.546Oryzias_latipes_hsok
ENSCAFG00000017584SMARCA410085.906ENSORLG00015016560smarca4a10085.854Oryzias_latipes_hsok
ENSCAFG00000017584SMARCA49683.509ENSOMEG00000016626-9983.612Oryzias_melastigma
ENSCAFG00000017584SMARCA410086.561ENSOMEG00000007486smarca4a10086.882Oryzias_melastigma
ENSCAFG00000017584SMARCA48997.576ENSOGAG00000016148SMARCA410097.576Otolemur_garnettii
ENSCAFG00000017584SMARCA410097.895ENSOARG00000017454SMARCA410097.895Ovis_aries
ENSCAFG00000017584SMARCA410099.752ENSPPAG00000043191SMARCA410099.752Pan_paniscus
ENSCAFG00000017584SMARCA410099.567ENSPPRG00000000064SMARCA410099.567Panthera_pardus
ENSCAFG00000017584SMARCA410099.752ENSPTRG00000010488SMARCA410099.752Pan_troglodytes
ENSCAFG00000017584SMARCA410099.628ENSPANG00000011042SMARCA49999.628Papio_anubis
ENSCAFG00000017584SMARCA410088.085ENSPKIG00000007770SMARCA410088.085Paramormyrops_kingsleyae
ENSCAFG00000017584SMARCA49886.529ENSPKIG00000010087-9887.147Paramormyrops_kingsleyae
ENSCAFG00000017584SMARCA410090.904ENSPSIG00000005547SMARCA410089.994Pelodiscus_sinensis
ENSCAFG00000017584SMARCA410099.072ENSPEMG00000020389Smarca410099.072Peromyscus_maniculatus_bairdii
ENSCAFG00000017584SMARCA410098.761ENSPCIG00000017138SMARCA410098.761Phascolarctos_cinereus
ENSCAFG00000017584SMARCA410083.821ENSPFOG00000012930-9983.681Poecilia_formosa
ENSCAFG00000017584SMARCA410083.463ENSPFOG00000007892smarca4a10086.679Poecilia_formosa
ENSCAFG00000017584SMARCA48290.150ENSPLAG00000018616-8190.527Poecilia_latipinna
ENSCAFG00000017584SMARCA410083.364ENSPLAG00000014294smarca4a10086.740Poecilia_latipinna
ENSCAFG00000017584SMARCA48090.683ENSPMEG00000003725smarca4a9787.452Poecilia_mexicana
ENSCAFG00000017584SMARCA49984.909ENSPMEG00000008929-9884.847Poecilia_mexicana
ENSCAFG00000017584SMARCA49487.183ENSPREG00000014823-9784.408Poecilia_reticulata
ENSCAFG00000017584SMARCA49785.442ENSPREG00000014608smarca4a10086.372Poecilia_reticulata
ENSCAFG00000017584SMARCA410097.693ENSPPYG00000009568SMARCA410097.693Pongo_abelii
ENSCAFG00000017584SMARCA47998.675ENSPCAG00000014054SMARCA47798.675Procavia_capensis
ENSCAFG00000017584SMARCA410099.504ENSPCOG00000023011SMARCA410099.320Propithecus_coquereli
ENSCAFG00000017584SMARCA49599.058ENSPVAG00000007787SMARCA49699.058Pteropus_vampyrus
ENSCAFG00000017584SMARCA49786.523ENSPNYG00000000717smarca4a9687.949Pundamilia_nyererei
ENSCAFG00000017584SMARCA49586.778ENSPNAG00000006636-9786.402Pygocentrus_nattereri
ENSCAFG00000017584SMARCA410099.195ENSRNOG00000009271Smarca410099.195Rattus_norvegicus
ENSCAFG00000017584SMARCA410099.566ENSRBIG00000038696SMARCA49999.566Rhinopithecus_bieti
ENSCAFG00000017584SMARCA410099.628ENSRROG00000045509SMARCA410099.628Rhinopithecus_roxellana
ENSCAFG00000017584SMARCA410099.442ENSSBOG00000026896SMARCA49999.627Saimiri_boliviensis_boliviensis
ENSCAFG00000017584SMARCA410098.575ENSSHAG00000001642SMARCA410098.575Sarcophilus_harrisii
ENSCAFG00000017584SMARCA49190.359ENSSFOG00015009921-9190.868Scleropages_formosus
ENSCAFG00000017584SMARCA410088.518ENSSFOG00015013823smarca410087.310Scleropages_formosus
ENSCAFG00000017584SMARCA410085.749ENSSMAG00000003200smarca4a10085.447Scophthalmus_maximus
ENSCAFG00000017584SMARCA410081.992ENSSMAG00000014082-9981.845Scophthalmus_maximus
ENSCAFG00000017584SMARCA49986.173ENSSDUG00000005388-9586.973Seriola_dumerili
ENSCAFG00000017584SMARCA410083.661ENSSDUG00000017298smarca4a10083.752Seriola_dumerili
ENSCAFG00000017584SMARCA49587.362ENSSLDG00000023663-9787.768Seriola_lalandi_dorsalis
ENSCAFG00000017584SMARCA410086.775ENSSLDG00000024486smarca4a10086.538Seriola_lalandi_dorsalis
ENSCAFG00000017584SMARCA464100.000ENSSARG00000013477SMARCA482100.000Sorex_araneus
ENSCAFG00000017584SMARCA49592.537ENSSPUG00000004558SMARCA49892.482Sphenodon_punctatus
ENSCAFG00000017584SMARCA410083.640ENSSPAG00000012533-9982.998Stegastes_partitus
ENSCAFG00000017584SMARCA410086.292ENSSPAG00000004248smarca4a10085.988Stegastes_partitus
ENSCAFG00000017584SMARCA410099.567ENSSSCG00000013629SMARCA410099.567Sus_scrofa
ENSCAFG00000017584SMARCA45290.403ENSTGUG00000015488-9990.403Taeniopygia_guttata
ENSCAFG00000017584SMARCA48981.527ENSTRUG00000004885smarca4a10081.403Takifugu_rubripes
ENSCAFG00000017584SMARCA49582.743ENSTRUG00000001378SMARCA49883.249Takifugu_rubripes
ENSCAFG00000017584SMARCA47385.461ENSTNIG00000004859-10084.043Tetraodon_nigroviridis
ENSCAFG00000017584SMARCA410083.262ENSTNIG00000004536SMARCA410083.700Tetraodon_nigroviridis
ENSCAFG00000017584SMARCA410095.932ENSTTRG00000009519SMARCA410095.932Tursiops_truncatus
ENSCAFG00000017584SMARCA410099.938ENSUAMG00000014661SMARCA410099.938Ursus_americanus
ENSCAFG00000017584SMARCA410097.708ENSUMAG00000022005SMARCA49999.476Ursus_maritimus
ENSCAFG00000017584SMARCA4100100.000ENSVVUG00000017820SMARCA497100.000Vulpes_vulpes
ENSCAFG00000017584SMARCA410086.582ENSXETG00000009355smarca49987.488Xenopus_tropicalis
ENSCAFG00000017584SMARCA410084.412ENSXMAG00000007030-9983.902Xiphophorus_maculatus
ENSCAFG00000017584SMARCA410086.569ENSXMAG00000006321smarca4a10086.707Xiphophorus_maculatus

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