EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAFG00000017608 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Canis_familiaris
Status: putative
Strand: Minus strand
Length: 3244 bases
Position: chr4:54877734-54880977
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00000030908	RRM_1	PF00076.22	2.2e-19	1	2
ENSCAFP00000030908	RRM_1	PF00076.22	2.2e-19	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00000027920	-	2034	-	ENSCAFP00000030908	678 (aa)	-	F1Q1U4

Gene Model

Click here to download ENSCAFG00000017608's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00000017608's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAFG00000017608	-	53	61.789	ENSCAFG00000007359	ZMYM5	88	52.929
ENSCAFG00000017608	-	66	87.696	ENSCAFG00000018271	-	66	87.727
ENSCAFG00000017608	-	96	77.812	ENSCAFG00000003595	-	100	80.378

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00000017608	-	71	88.199	ENSG00000116560	SFPQ	97	94.907	Homo_sapiens
ENSCAFG00000017608	-	65	93.182	ENSAMEG00000000815	SFPQ	100	92.955	Ailuropoda_melanoleuca
ENSCAFG00000017608	-	63	69.070	ENSACIG00000000905	sfpq	72	66.055	Amphilophus_citrinellus
ENSCAFG00000017608	-	62	71.631	ENSAOCG00000002889	sfpq	60	69.746	Amphiprion_ocellaris
ENSCAFG00000017608	-	62	71.631	ENSAPEG00000016556	sfpq	60	69.746	Amphiprion_percula
ENSCAFG00000017608	-	75	65.619	ENSATEG00000002981	sfpq	67	71.233	Anabas_testudineus
ENSCAFG00000017608	-	50	74.631	ENSANAG00000037798	-	96	74.336	Aotus_nancymaae
ENSCAFG00000017608	-	51	71.307	ENSANAG00000021268	-	100	68.571	Aotus_nancymaae
ENSCAFG00000017608	-	96	64.134	ENSANAG00000027438	-	60	83.130	Aotus_nancymaae
ENSCAFG00000017608	-	68	64.859	ENSAMXG00000011538	sfpq	65	67.045	Astyanax_mexicanus
ENSCAFG00000017608	-	96	80.645	ENSBTAG00000016328	SFPQ	85	83.721	Bos_taurus
ENSCAFG00000017608	-	71	88.199	ENSCJAG00000001431	SFPQ	85	81.322	Callithrix_jacchus
ENSCAFG00000017608	-	96	77.370	ENSCAFG00020004881	-	66	87.727	Canis_lupus_dingo
ENSCAFG00000017608	-	52	85.714	ENSCAFG00020010702	-	100	85.429	Canis_lupus_dingo
ENSCAFG00000017608	-	87	83.389	ENSCHIG00000023097	SFPQ	100	76.117	Capra_hircus
ENSCAFG00000017608	-	52	94.017	ENSTSYG00000037120	-	100	93.732	Carlito_syrichta
ENSCAFG00000017608	-	51	82.709	ENSTSYG00000035106	-	99	82.051	Carlito_syrichta
ENSCAFG00000017608	-	52	83.944	ENSCPOG00000015018	-	100	81.492	Cavia_porcellus
ENSCAFG00000017608	-	71	88.820	ENSCCAG00000029361	-	85	80.826	Cebus_capucinus
ENSCAFG00000017608	-	68	65.401	ENSCATG00000032664	-	84	62.207	Cercocebus_atys
ENSCAFG00000017608	-	56	90.551	ENSCATG00000036179	-	80	77.941	Cercocebus_atys
ENSCAFG00000017608	-	52	94.017	ENSCLAG00000009583	-	100	93.732	Chinchilla_lanigera
ENSCAFG00000017608	-	71	88.199	ENSCSAG00000001082	SFPQ	85	81.157	Chlorocebus_sabaeus
ENSCAFG00000017608	-	55	90.617	ENSCHOG00000009131	SFPQ	100	89.211	Choloepus_hoffmanni
ENSCAFG00000017608	-	65	86.353	ENSCPBG00000018674	SFPQ	69	86.486	Chrysemys_picta_bellii
ENSCAFG00000017608	-	52	94.017	ENSCANG00000028087	-	100	93.732	Colobus_angolensis_palliatus
ENSCAFG00000017608	-	66	91.778	ENSCGRG00001011698	Sfpq	85	80.763	Cricetulus_griseus_chok1gshd
ENSCAFG00000017608	-	63	92.774	ENSCGRG00000010128	Sfpq	95	92.575	Cricetulus_griseus_crigri
ENSCAFG00000017608	-	77	62.239	ENSCSEG00000007852	sfpq	67	67.426	Cynoglossus_semilaevis
ENSCAFG00000017608	-	63	65.728	ENSCVAG00000019538	sfpq	64	61.412	Cyprinodon_variegatus
ENSCAFG00000017608	-	64	65.753	ENSDARG00000011564	sfpq	100	77.391	Danio_rerio
ENSCAFG00000017608	-	65	93.197	ENSDNOG00000049454	SFPQ	85	83.860	Dasypus_novemcinctus
ENSCAFG00000017608	-	71	88.199	ENSDORG00000008109	Sfpq	85	83.860	Dipodomys_ordii
ENSCAFG00000017608	-	70	86.775	ENSETEG00000001095	SFPQ	67	80.220	Echinops_telfairi
ENSCAFG00000017608	-	71	88.199	ENSEASG00005012012	SFPQ	97	75.150	Equus_asinus_asinus
ENSCAFG00000017608	-	71	88.199	ENSECAG00000000642	SFPQ	97	75.150	Equus_caballus
ENSCAFG00000017608	-	63	69.838	ENSELUG00000023145	sfpq	66	67.209	Esox_lucius
ENSCAFG00000017608	-	87	84.193	ENSFCAG00000042862	SFPQ	85	84.526	Felis_catus
ENSCAFG00000017608	-	52	88.889	ENSFALG00000000731	SFPQ	100	88.604	Ficedula_albicollis
ENSCAFG00000017608	-	52	84.571	ENSFDAG00000017723	-	100	84.091	Fukomys_damarensis
ENSCAFG00000017608	-	76	56.464	ENSFHEG00000015200	sfpq	56	62.903	Fundulus_heteroclitus
ENSCAFG00000017608	-	63	69.535	ENSGMOG00000011957	sfpq	65	69.070	Gadus_morhua
ENSCAFG00000017608	-	63	70.960	ENSGMOG00000011950	SFPQ	74	70.302	Gadus_morhua
ENSCAFG00000017608	-	69	60.677	ENSGAFG00000014571	sfpq	64	64.230	Gambusia_affinis
ENSCAFG00000017608	-	89	57.635	ENSGACG00000002034	sfpq	68	69.515	Gasterosteus_aculeatus
ENSCAFG00000017608	-	64	92.841	ENSGGOG00000026354	SFPQ	100	93.732	Gorilla_gorilla
ENSCAFG00000017608	-	65	68.397	ENSHBUG00000016818	sfpq	63	69.091	Haplochromis_burtoni
ENSCAFG00000017608	-	65	92.568	ENSHGLG00000012001	SFPQ	64	92.325	Heterocephalus_glaber_female
ENSCAFG00000017608	-	52	94.017	ENSHGLG00100004136	-	100	93.732	Heterocephalus_glaber_male
ENSCAFG00000017608	-	64	69.406	ENSHCOG00000008612	sfpq	60	74.018	Hippocampus_comes
ENSCAFG00000017608	-	63	69.159	ENSIPUG00000013076	SFPQ	69	71.429	Ictalurus_punctatus
ENSCAFG00000017608	-	52	94.017	ENSSTOG00000014004	-	100	93.732	Ictidomys_tridecemlineatus
ENSCAFG00000017608	-	65	92.971	ENSJJAG00000015633	Sfpq	100	75.421	Jaculus_jaculus
ENSCAFG00000017608	-	93	54.364	ENSKMAG00000000238	sfpq	54	65.977	Kryptolebias_marmoratus
ENSCAFG00000017608	-	61	71.053	ENSLBEG00000003163	sfpq	57	68.585	Labrus_bergylta
ENSCAFG00000017608	-	65	75.506	ENSLACG00000014728	SFPQ	70	74.828	Latimeria_chalumnae
ENSCAFG00000017608	-	91	59.253	ENSLOCG00000001067	sfpq	68	76.943	Lepisosteus_oculatus
ENSCAFG00000017608	-	71	88.406	ENSLAFG00000015951	SFPQ	85	83.195	Loxodonta_africana
ENSCAFG00000017608	-	71	88.199	ENSMFAG00000000797	SFPQ	85	81.157	Macaca_fascicularis
ENSCAFG00000017608	-	71	88.199	ENSMMUG00000019154	SFPQ	85	81.157	Macaca_mulatta
ENSCAFG00000017608	-	71	88.199	ENSMNEG00000038895	SFPQ	85	81.157	Macaca_nemestrina
ENSCAFG00000017608	-	52	90.883	ENSMLEG00000010643	-	100	90.598	Mandrillus_leucophaeus
ENSCAFG00000017608	-	80	63.110	ENSMAMG00000007875	sfpq	66	72.791	Mastacembelus_armatus
ENSCAFG00000017608	-	65	69.074	ENSMZEG00005026091	sfpq	61	71.392	Maylandia_zebra
ENSCAFG00000017608	-	56	85.678	ENSMGAG00000004237	SFPQ	100	84.399	Meleagris_gallopavo
ENSCAFG00000017608	-	66	91.778	ENSMAUG00000006402	Sfpq	85	80.763	Mesocricetus_auratus
ENSCAFG00000017608	-	71	88.199	ENSMICG00000027265	SFPQ	86	81.322	Microcebus_murinus
ENSCAFG00000017608	-	66	88.393	ENSMOCG00000019075	Sfpq	91	88.636	Microtus_ochrogaster
ENSCAFG00000017608	-	82	58.070	ENSMMOG00000001074	sfpq	65	68.998	Mola_mola
ENSCAFG00000017608	-	65	89.640	ENSMODG00000017937	SFPQ	65	89.545	Monodelphis_domestica
ENSCAFG00000017608	-	63	69.930	ENSMALG00000010381	sfpq	64	70.573	Monopterus_albus
ENSCAFG00000017608	-	65	92.517	MGP_CAROLIEiJ_G0026487	Sfpq	85	81.135	Mus_caroli
ENSCAFG00000017608	-	65	92.517	ENSMUSG00000028820	Sfpq	85	81.135	Mus_musculus
ENSCAFG00000017608	-	87	81.135	MGP_PahariEiJ_G0028818	Sfpq	85	81.135	Mus_pahari
ENSCAFG00000017608	-	65	92.517	MGP_SPRETEiJ_G0027466	Sfpq	85	81.135	Mus_spretus
ENSCAFG00000017608	-	66	90.380	ENSMLUG00000027090	SFPQ	97	91.724	Myotis_lucifugus
ENSCAFG00000017608	-	71	88.223	ENSNGAG00000000888	Sfpq	85	80.795	Nannospalax_galili
ENSCAFG00000017608	-	82	57.732	ENSNBRG00000017479	sfpq	61	71.392	Neolamprologus_brichardi
ENSCAFG00000017608	-	52	94.017	ENSNLEG00000035521	-	100	93.732	Nomascus_leucogenys
ENSCAFG00000017608	-	68	89.294	ENSMEUG00000014082	SFPQ	63	88.636	Notamacropus_eugenii
ENSCAFG00000017608	-	73	83.789	ENSOPRG00000013696	SFPQ	68	92.694	Ochotona_princeps
ENSCAFG00000017608	-	63	81.499	ENSODEG00000005485	SFPQ	77	79.577	Octodon_degus
ENSCAFG00000017608	-	67	66.524	ENSONIG00000017737	sfpq	63	69.318	Oreochromis_niloticus
ENSCAFG00000017608	-	52	92.023	ENSOANG00000008789	-	100	91.738	Ornithorhynchus_anatinus
ENSCAFG00000017608	-	74	84.078	ENSOCUG00000001877	SFPQ	86	92.938	Oryctolagus_cuniculus
ENSCAFG00000017608	-	74	61.417	ENSORLG00000007459	sfpq	55	69.610	Oryzias_latipes
ENSCAFG00000017608	-	75	61.598	ENSORLG00020011818	sfpq	57	67.209	Oryzias_latipes_hni
ENSCAFG00000017608	-	89	54.213	ENSORLG00015002131	sfpq	58	66.590	Oryzias_latipes_hsok
ENSCAFG00000017608	-	75	61.014	ENSOMEG00000018020	sfpq	54	69.870	Oryzias_melastigma
ENSCAFG00000017608	-	71	87.992	ENSOGAG00000027710	SFPQ	91	88.199	Otolemur_garnettii
ENSCAFG00000017608	-	68	96.667	ENSOARG00000019439	SFPQ	73	91.898	Ovis_aries
ENSCAFG00000017608	-	84	93.197	ENSPPAG00000030078	SFPQ	68	92.955	Pan_paniscus
ENSCAFG00000017608	-	52	93.750	ENSPPRG00000015478	-	100	93.466	Panthera_pardus
ENSCAFG00000017608	-	52	94.017	ENSPTIG00000007710	-	100	93.732	Panthera_tigris_altaica
ENSCAFG00000017608	-	71	88.199	ENSPANG00000005380	SFPQ	72	88.406	Papio_anubis
ENSCAFG00000017608	-	65	70.917	ENSPKIG00000023035	sfpq	73	73.672	Paramormyrops_kingsleyae
ENSCAFG00000017608	-	63	88.167	ENSPSIG00000011494	SFPQ	100	87.007	Pelodiscus_sinensis
ENSCAFG00000017608	-	62	64.354	ENSPMGG00000023883	sfpq	58	75.466	Periophthalmus_magnuspinnatus
ENSCAFG00000017608	-	72	84.756	ENSPEMG00000009794	Sfpq	91	92.273	Peromyscus_maniculatus_bairdii
ENSCAFG00000017608	-	65	89.414	ENSPCIG00000000923	SFPQ	63	88.864	Phascolarctos_cinereus
ENSCAFG00000017608	-	80	55.678	ENSPFOG00000003127	sfpq	71	62.356	Poecilia_formosa
ENSCAFG00000017608	-	71	88.199	ENSPPYG00000001560	SFPQ	85	81.157	Pongo_abelii
ENSCAFG00000017608	-	63	92.075	ENSPCAG00000006164	SFPQ	60	91.841	Procavia_capensis
ENSCAFG00000017608	-	71	88.199	ENSPCOG00000027127	SFPQ	85	81.322	Propithecus_coquereli
ENSCAFG00000017608	-	96	80.325	ENSPVAG00000001865	SFPQ	85	81.697	Pteropus_vampyrus
ENSCAFG00000017608	-	65	68.397	ENSPNYG00000007494	sfpq	62	69.091	Pundamilia_nyererei
ENSCAFG00000017608	-	75	62.913	ENSPNAG00000002128	sfpq	72	68.950	Pygocentrus_nattereri
ENSCAFG00000017608	-	65	92.517	ENSRNOG00000058461	Sfpq	86	81.135	Rattus_norvegicus
ENSCAFG00000017608	-	97	69.075	ENSRBIG00000035286	SFPQ	100	93.732	Rhinopithecus_bieti
ENSCAFG00000017608	-	69	96.429	ENSRROG00000040992	SFPQ	100	93.732	Rhinopithecus_roxellana
ENSCAFG00000017608	-	52	94.017	ENSSBOG00000024972	-	100	93.732	Saimiri_boliviensis_boliviensis
ENSCAFG00000017608	-	63	84.633	ENSSHAG00000016107	-	97	82.851	Sarcophilus_harrisii
ENSCAFG00000017608	-	50	87.719	ENSSHAG00000012312	-	100	84.571	Sarcophilus_harrisii
ENSCAFG00000017608	-	71	66.942	ENSSFOG00015009289	sfpq	79	72.500	Scleropages_formosus
ENSCAFG00000017608	-	81	60.784	ENSSMAG00000018201	sfpq	65	69.655	Scophthalmus_maximus
ENSCAFG00000017608	-	63	71.759	ENSSDUG00000008402	sfpq	65	73.380	Seriola_dumerili
ENSCAFG00000017608	-	77	63.148	ENSSLDG00000018917	sfpq	65	73.380	Seriola_lalandi_dorsalis
ENSCAFG00000017608	-	54	94.022	ENSSARG00000006409	SFPQ	100	93.750	Sorex_araneus
ENSCAFG00000017608	-	62	71.294	ENSSPAG00000016550	sfpq	64	69.545	Stegastes_partitus
ENSCAFG00000017608	-	87	83.361	ENSSSCG00000035690	SFPQ	85	83.694	Sus_scrofa
ENSCAFG00000017608	-	63	88.399	ENSTGUG00000001722	SFPQ	100	87.239	Taeniopygia_guttata
ENSCAFG00000017608	-	78	60.413	ENSTRUG00000003783	sfpq	60	73.077	Takifugu_rubripes
ENSCAFG00000017608	-	82	77.561	ENSTBEG00000006238	SFPQ	59	89.630	Tupaia_belangeri
ENSCAFG00000017608	-	71	84.647	ENSTTRG00000013930	SFPQ	85	81.167	Tursiops_truncatus
ENSCAFG00000017608	-	52	91.453	ENSUMAG00000008056	-	100	91.168	Ursus_maritimus
ENSCAFG00000017608	-	58	84.091	ENSVPAG00000006960	-	60	84.051	Vicugna_pacos
ENSCAFG00000017608	-	52	83.191	ENSVVUG00000000874	-	100	82.906	Vulpes_vulpes
ENSCAFG00000017608	-	66	74.009	ENSXETG00000009682	sfpq	100	78.947	Xenopus_tropicalis