EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCAFG00000017616 (Gene tree)
Gene ID: 487625
Gene Symbol: LARP6
Alias: -
Full Name: La ribonucleoprotein domain family member 6
Gene Type: protein_coding
Species: Canis_familiaris
Status: putative
Strand: Minus strand
Length: 14787 bases
Position: chr30:34520828-34535614
Accession: 42590
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00000025971	La	PF05383.17	7.8e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00000027928	-	2611	XM_005638549	ENSCAFP00000025971	428 (aa)	XP_005638606	F1PKV9

Gene Model

Click here to download ENSCAFG00000017616's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00000017616's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00000017616	LARP6	99	94.118	ENSG00000166173	LARP6	100	93.548	Homo_sapiens
ENSCAFG00000017616	LARP6	97	59.767	ENSAPOG00000021773	larp6a	60	59.767	Acanthochromis_polyacanthus
ENSCAFG00000017616	LARP6	99	94.824	ENSAMEG00000008897	LARP6	99	94.824	Ailuropoda_melanoleuca
ENSCAFG00000017616	LARP6	99	59.817	ENSACIG00000005166	larp6a	84	59.361	Amphilophus_citrinellus
ENSCAFG00000017616	LARP6	97	59.767	ENSAOCG00000002284	larp6a	60	59.767	Amphiprion_ocellaris
ENSCAFG00000017616	LARP6	97	59.767	ENSAPEG00000008077	larp6a	81	59.767	Amphiprion_percula
ENSCAFG00000017616	LARP6	97	59.535	ENSATEG00000004018	larp6a	60	59.028	Anabas_testudineus
ENSCAFG00000017616	LARP6	98	71.631	ENSAPLG00000009914	LARP6	99	71.631	Anas_platyrhynchos
ENSCAFG00000017616	LARP6	96	68.029	ENSACAG00000008613	LARP6	98	68.029	Anolis_carolinensis
ENSCAFG00000017616	LARP6	99	93.412	ENSANAG00000024860	LARP6	86	93.412	Aotus_nancymaae
ENSCAFG00000017616	LARP6	99	59.589	ENSACLG00000018561	larp6a	60	58.864	Astatotilapia_calliptera
ENSCAFG00000017616	LARP6	99	58.050	ENSAMXG00000029387	larp6a	65	58.957	Astyanax_mexicanus
ENSCAFG00000017616	LARP6	95	41.748	ENSAMXG00000036816	-	93	40.777	Astyanax_mexicanus
ENSCAFG00000017616	LARP6	99	92.471	ENSBTAG00000003915	LARP6	86	92.471	Bos_taurus
ENSCAFG00000017616	LARP6	99	93.412	ENSCJAG00000018642	-	86	93.412	Callithrix_jacchus
ENSCAFG00000017616	LARP6	99	92.941	ENSCJAG00000046236	-	86	92.941	Callithrix_jacchus
ENSCAFG00000017616	LARP6	99	100.000	ENSCAFG00020007296	LARP6	87	100.000	Canis_lupus_dingo
ENSCAFG00000017616	LARP6	99	92.000	ENSCHIG00000013742	LARP6	86	92.000	Capra_hircus
ENSCAFG00000017616	LARP6	99	92.471	ENSTSYG00000028124	LARP6	87	92.471	Carlito_syrichta
ENSCAFG00000017616	LARP6	99	91.038	ENSCAPG00000015452	LARP6	99	91.038	Cavia_aperea
ENSCAFG00000017616	LARP6	99	90.802	ENSCPOG00000022687	LARP6	86	90.802	Cavia_porcellus
ENSCAFG00000017616	LARP6	99	93.647	ENSCCAG00000036320	LARP6	86	93.647	Cebus_capucinus
ENSCAFG00000017616	LARP6	99	94.588	ENSCATG00000042432	LARP6	86	94.588	Cercocebus_atys
ENSCAFG00000017616	LARP6	99	93.381	ENSCLAG00000007893	LARP6	86	93.381	Chinchilla_lanigera
ENSCAFG00000017616	LARP6	99	94.588	ENSCSAG00000013672	LARP6	86	94.588	Chlorocebus_sabaeus
ENSCAFG00000017616	LARP6	99	90.330	ENSCHOG00000003318	LARP6	89	90.330	Choloepus_hoffmanni
ENSCAFG00000017616	LARP6	98	71.838	ENSCPBG00000010771	LARP6	81	71.838	Chrysemys_picta_bellii
ENSCAFG00000017616	LARP6	99	94.353	ENSCANG00000025833	LARP6	100	94.353	Colobus_angolensis_palliatus
ENSCAFG00000017616	LARP6	99	93.144	ENSCGRG00001024472	Larp6	86	93.144	Cricetulus_griseus_chok1gshd
ENSCAFG00000017616	LARP6	99	93.144	ENSCGRG00000004527	Larp6	86	93.144	Cricetulus_griseus_crigri
ENSCAFG00000017616	LARP6	97	59.907	ENSCSEG00000011196	larp6a	63	59.207	Cynoglossus_semilaevis
ENSCAFG00000017616	LARP6	99	58.998	ENSCVAG00000009605	larp6a	62	59.584	Cyprinodon_variegatus
ENSCAFG00000017616	LARP6	97	58.430	ENSDARG00000005355	larp6a	97	60.798	Danio_rerio
ENSCAFG00000017616	LARP6	99	92.453	ENSDNOG00000042993	LARP6	87	92.453	Dasypus_novemcinctus
ENSCAFG00000017616	LARP6	99	81.967	ENSDORG00000023910	Larp6	87	81.967	Dipodomys_ordii
ENSCAFG00000017616	LARP6	75	91.237	ENSETEG00000020390	LARP6	64	91.237	Echinops_telfairi
ENSCAFG00000017616	LARP6	99	94.353	ENSEASG00005005490	LARP6	63	94.353	Equus_asinus_asinus
ENSCAFG00000017616	LARP6	99	94.353	ENSECAG00000014190	LARP6	94	94.353	Equus_caballus
ENSCAFG00000017616	LARP6	98	58.916	ENSELUG00000007341	larp6a	63	58.465	Esox_lucius
ENSCAFG00000017616	LARP6	99	94.353	ENSFCAG00000001361	LARP6	86	94.353	Felis_catus
ENSCAFG00000017616	LARP6	99	70.657	ENSFALG00000012389	LARP6	90	70.657	Ficedula_albicollis
ENSCAFG00000017616	LARP6	99	93.412	ENSFDAG00000019994	LARP6	83	93.412	Fukomys_damarensis
ENSCAFG00000017616	LARP6	99	58.998	ENSFHEG00000010312	larp6a	62	58.314	Fundulus_heteroclitus
ENSCAFG00000017616	LARP6	50	74.286	ENSGMOG00000002119	larp6a	70	74.286	Gadus_morhua
ENSCAFG00000017616	LARP6	98	71.868	ENSGALG00000004046	LARP6	86	71.868	Gallus_gallus
ENSCAFG00000017616	LARP6	99	59.453	ENSGAFG00000009426	larp6a	63	60.046	Gambusia_affinis
ENSCAFG00000017616	LARP6	97	59.629	ENSGACG00000014622	larp6a	96	58.701	Gasterosteus_aculeatus
ENSCAFG00000017616	LARP6	89	72.178	ENSGAGG00000010802	LARP6	57	72.178	Gopherus_agassizii
ENSCAFG00000017616	LARP6	99	94.118	ENSGGOG00000024151	LARP6	100	94.118	Gorilla_gorilla
ENSCAFG00000017616	LARP6	99	59.589	ENSHBUG00000021014	larp6a	60	58.864	Haplochromis_burtoni
ENSCAFG00000017616	LARP6	99	93.882	ENSHGLG00000015112	LARP6	86	93.882	Heterocephalus_glaber_female
ENSCAFG00000017616	LARP6	99	93.882	ENSHGLG00100013159	LARP6	100	93.882	Heterocephalus_glaber_male
ENSCAFG00000017616	LARP6	99	58.676	ENSHCOG00000001241	larp6a	83	58.904	Hippocampus_comes
ENSCAFG00000017616	LARP6	99	58.784	ENSIPUG00000010187	larp6	65	60.185	Ictalurus_punctatus
ENSCAFG00000017616	LARP6	98	37.176	ENSIPUG00000002828	-	96	36.620	Ictalurus_punctatus
ENSCAFG00000017616	LARP6	99	93.617	ENSSTOG00000024279	LARP6	92	93.617	Ictidomys_tridecemlineatus
ENSCAFG00000017616	LARP6	99	90.566	ENSJJAG00000011013	Larp6	87	90.566	Jaculus_jaculus
ENSCAFG00000017616	LARP6	99	60.091	ENSKMAG00000001702	larp6a	59	60.091	Kryptolebias_marmoratus
ENSCAFG00000017616	LARP6	97	57.870	ENSLBEG00000000170	larp6a	81	57.870	Labrus_bergylta
ENSCAFG00000017616	LARP6	99	68.085	ENSLACG00000018706	LARP6	81	68.085	Latimeria_chalumnae
ENSCAFG00000017616	LARP6	97	42.056	ENSLACG00000002786	-	98	44.626	Latimeria_chalumnae
ENSCAFG00000017616	LARP6	97	62.150	ENSLOCG00000014592	larp6a	62	62.998	Lepisosteus_oculatus
ENSCAFG00000017616	LARP6	97	45.047	ENSLOCG00000008547	-	82	42.689	Lepisosteus_oculatus
ENSCAFG00000017616	LARP6	99	92.199	ENSLAFG00000016343	LARP6	95	92.199	Loxodonta_africana
ENSCAFG00000017616	LARP6	99	94.353	ENSMFAG00000035507	LARP6	94	94.353	Macaca_fascicularis
ENSCAFG00000017616	LARP6	99	94.353	ENSMMUG00000004429	LARP6	89	94.353	Macaca_mulatta
ENSCAFG00000017616	LARP6	99	94.353	ENSMNEG00000045335	LARP6	86	94.353	Macaca_nemestrina
ENSCAFG00000017616	LARP6	99	94.353	ENSMLEG00000038587	LARP6	100	94.353	Mandrillus_leucophaeus
ENSCAFG00000017616	LARP6	97	59.722	ENSMAMG00000005261	larp6a	60	59.028	Mastacembelus_armatus
ENSCAFG00000017616	LARP6	99	59.589	ENSMZEG00005005774	larp6a	60	58.864	Maylandia_zebra
ENSCAFG00000017616	LARP6	98	72.038	ENSMGAG00000005077	LARP6	99	72.038	Meleagris_gallopavo
ENSCAFG00000017616	LARP6	99	92.671	ENSMAUG00000018486	Larp6	86	92.671	Mesocricetus_auratus
ENSCAFG00000017616	LARP6	99	91.981	ENSMICG00000011234	LARP6	87	91.981	Microcebus_murinus
ENSCAFG00000017616	LARP6	99	92.689	ENSMOCG00000010492	Larp6	86	92.689	Microtus_ochrogaster
ENSCAFG00000017616	LARP6	97	60.839	ENSMMOG00000016284	larp6a	82	59.907	Mola_mola
ENSCAFG00000017616	LARP6	99	77.541	ENSMODG00000009034	LARP6	82	77.541	Monodelphis_domestica
ENSCAFG00000017616	LARP6	97	59.722	ENSMALG00000014439	larp6a	81	59.491	Monopterus_albus
ENSCAFG00000017616	LARP6	99	93.160	MGP_CAROLIEiJ_G0032314	Larp6	86	93.160	Mus_caroli
ENSCAFG00000017616	LARP6	99	92.925	ENSMUSG00000034839	Larp6	86	92.925	Mus_musculus
ENSCAFG00000017616	LARP6	99	92.217	MGP_PahariEiJ_G0015180	Larp6	86	92.217	Mus_pahari
ENSCAFG00000017616	LARP6	99	92.689	MGP_SPRETEiJ_G0033452	Larp6	86	92.689	Mus_spretus
ENSCAFG00000017616	LARP6	99	95.294	ENSMPUG00000017086	LARP6	99	95.294	Mustela_putorius_furo
ENSCAFG00000017616	LARP6	99	93.647	ENSMLUG00000010319	LARP6	86	93.647	Myotis_lucifugus
ENSCAFG00000017616	LARP6	99	91.038	ENSNGAG00000014238	Larp6	86	91.038	Nannospalax_galili
ENSCAFG00000017616	LARP6	99	59.589	ENSNBRG00000008120	larp6a	83	59.318	Neolamprologus_brichardi
ENSCAFG00000017616	LARP6	99	94.353	ENSNLEG00000013691	LARP6	87	94.353	Nomascus_leucogenys
ENSCAFG00000017616	LARP6	84	79.461	ENSMEUG00000002270	LARP6	86	67.294	Notamacropus_eugenii
ENSCAFG00000017616	LARP6	82	80.114	ENSOPRG00000004868	-	100	80.114	Ochotona_princeps
ENSCAFG00000017616	LARP6	99	89.623	ENSODEG00000015958	LARP6	86	89.623	Octodon_degus
ENSCAFG00000017616	LARP6	99	59.589	ENSONIG00000002901	larp6a	82	59.318	Oreochromis_niloticus
ENSCAFG00000017616	LARP6	99	81.132	ENSOCUG00000009306	LARP6	99	81.132	Oryctolagus_cuniculus
ENSCAFG00000017616	LARP6	97	60.465	ENSORLG00000014256	larp6a	83	60.465	Oryzias_latipes
ENSCAFG00000017616	LARP6	97	60.465	ENSORLG00020019657	larp6a	61	60.465	Oryzias_latipes_hni
ENSCAFG00000017616	LARP6	97	60.465	ENSORLG00015017915	larp6a	61	60.465	Oryzias_latipes_hsok
ENSCAFG00000017616	LARP6	97	60.930	ENSOMEG00000017049	larp6a	61	60.930	Oryzias_melastigma
ENSCAFG00000017616	LARP6	98	91.148	ENSOGAG00000000522	LARP6	86	91.059	Otolemur_garnettii
ENSCAFG00000017616	LARP6	99	92.235	ENSOARG00000018750	LARP6	98	92.235	Ovis_aries
ENSCAFG00000017616	LARP6	99	94.118	ENSPPAG00000031247	LARP6	100	94.118	Pan_paniscus
ENSCAFG00000017616	LARP6	99	93.647	ENSPPRG00000011282	LARP6	86	93.647	Panthera_pardus
ENSCAFG00000017616	LARP6	99	93.882	ENSPTIG00000015318	LARP6	86	93.882	Panthera_tigris_altaica
ENSCAFG00000017616	LARP6	99	94.118	ENSPTRG00000007234	LARP6	86	94.118	Pan_troglodytes
ENSCAFG00000017616	LARP6	99	94.353	ENSPANG00000016362	LARP6	86	94.353	Papio_anubis
ENSCAFG00000017616	LARP6	99	59.101	ENSPKIG00000004511	LARP6	65	59.101	Paramormyrops_kingsleyae
ENSCAFG00000017616	LARP6	97	61.737	ENSPKIG00000020103	larp6a	80	61.502	Paramormyrops_kingsleyae
ENSCAFG00000017616	LARP6	71	81.731	ENSPSIG00000009071	LARP6	91	73.333	Pelodiscus_sinensis
ENSCAFG00000017616	LARP6	98	60.230	ENSPMGG00000006958	larp6a	85	59.310	Periophthalmus_magnuspinnatus
ENSCAFG00000017616	LARP6	99	92.908	ENSPEMG00000012909	Larp6	86	92.908	Peromyscus_maniculatus_bairdii
ENSCAFG00000017616	LARP6	99	78.824	ENSPCIG00000020765	LARP6	83	78.824	Phascolarctos_cinereus
ENSCAFG00000017616	LARP6	97	60.325	ENSPFOG00000014175	larp6a	81	60.508	Poecilia_formosa
ENSCAFG00000017616	LARP6	97	60.325	ENSPLAG00000011105	larp6a	60	60.508	Poecilia_latipinna
ENSCAFG00000017616	LARP6	97	60.093	ENSPMEG00000011085	larp6a	60	60.277	Poecilia_mexicana
ENSCAFG00000017616	LARP6	97	59.861	ENSPREG00000008067	larp6a	61	60.046	Poecilia_reticulata
ENSCAFG00000017616	LARP6	99	94.118	ENSPPYG00000006604	LARP6	86	94.118	Pongo_abelii
ENSCAFG00000017616	LARP6	74	91.566	ENSPCAG00000014197	LARP6	76	91.566	Procavia_capensis
ENSCAFG00000017616	LARP6	99	92.000	ENSPCOG00000022934	LARP6	86	92.000	Propithecus_coquereli
ENSCAFG00000017616	LARP6	99	92.941	ENSPVAG00000005618	LARP6	86	92.941	Pteropus_vampyrus
ENSCAFG00000017616	LARP6	99	59.589	ENSPNYG00000009835	larp6a	83	58.864	Pundamilia_nyererei
ENSCAFG00000017616	LARP6	99	58.314	ENSPNAG00000017966	larp6a	70	59.226	Pygocentrus_nattereri
ENSCAFG00000017616	LARP6	99	92.925	ENSRNOG00000012438	Larp6	86	92.925	Rattus_norvegicus
ENSCAFG00000017616	LARP6	99	94.118	ENSRBIG00000032902	LARP6	87	94.118	Rhinopithecus_bieti
ENSCAFG00000017616	LARP6	99	94.118	ENSRROG00000043074	LARP6	86	94.118	Rhinopithecus_roxellana
ENSCAFG00000017616	LARP6	99	93.647	ENSSBOG00000024190	LARP6	100	93.647	Saimiri_boliviensis_boliviensis
ENSCAFG00000017616	LARP6	99	75.765	ENSSHAG00000018495	LARP6	99	75.765	Sarcophilus_harrisii
ENSCAFG00000017616	LARP6	97	61.737	ENSSFOG00015023268	larp6a	82	62.118	Scleropages_formosus
ENSCAFG00000017616	LARP6	97	54.610	ENSSFOG00015002254	LARP6	80	56.028	Scleropages_formosus
ENSCAFG00000017616	LARP6	99	59.681	ENSSMAG00000009953	larp6a	61	58.998	Scophthalmus_maximus
ENSCAFG00000017616	LARP6	97	60.325	ENSSDUG00000007438	larp6a	60	59.629	Seriola_dumerili
ENSCAFG00000017616	LARP6	97	60.325	ENSSLDG00000016647	larp6a	60	59.629	Seriola_lalandi_dorsalis
ENSCAFG00000017616	LARP6	99	71.564	ENSSPUG00000011312	LARP6	99	71.564	Sphenodon_punctatus
ENSCAFG00000017616	LARP6	97	59.767	ENSSPAG00000020502	larp6a	60	59.767	Stegastes_partitus
ENSCAFG00000017616	LARP6	99	92.471	ENSSSCG00000004974	LARP6	86	92.471	Sus_scrofa
ENSCAFG00000017616	LARP6	98	71.090	ENSTGUG00000005808	LARP6	99	71.090	Taeniopygia_guttata
ENSCAFG00000017616	LARP6	99	58.730	ENSTRUG00000003151	larp6a	64	58.636	Takifugu_rubripes
ENSCAFG00000017616	LARP6	97	58.768	ENSTNIG00000011926	larp6a	85	58.314	Tetraodon_nigroviridis
ENSCAFG00000017616	LARP6	99	89.882	ENSTBEG00000015077	LARP6	100	89.882	Tupaia_belangeri
ENSCAFG00000017616	LARP6	99	93.412	ENSUAMG00000010467	LARP6	86	93.412	Ursus_americanus
ENSCAFG00000017616	LARP6	99	99.765	ENSVVUG00000015227	LARP6	95	99.765	Vulpes_vulpes
ENSCAFG00000017616	LARP6	99	70.379	ENSXETG00000020340	larp6	85	71.090	Xenopus_tropicalis
ENSCAFG00000017616	LARP6	97	60.093	ENSXCOG00000012654	larp6a	86	60.093	Xiphophorus_couchianus
ENSCAFG00000017616	LARP6	97	60.093	ENSXMAG00000021015	larp6a	58	60.093	Xiphophorus_maculatus