EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAFG00000017861 (Gene tree)
Gene ID: 100683988
Gene Symbol: RAVER1
Alias: -
Full Name: ribonucleoprotein%2C PTB binding 1
Gene Type: protein_coding
Species: Canis_familiaris
Status: putative
Strand: Plus strand
Length: 15777 bases
Position: chr20:50782907-50798683
Accession: 100683988
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00000026360	RRM_1	PF00076.22	1.8e-28	1	2
ENSCAFP00000026360	RRM_1	PF00076.22	1.8e-28	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00000028345	RAVER1-201	4810	XM_003432784	ENSCAFP00000026360	733 (aa)	XP_003432832	E2RM84

Gene Model

Click here to download ENSCAFG00000017861's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00000017861's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAFG00000017861	RAVER1	56	42.204	ENSCAFG00000018617	RAVER2	83	42.585

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00000017861	RAVER1	100	90.079	ENSG00000161847	RAVER1	100	90.079	Homo_sapiens
ENSCAFG00000017861	RAVER1	68	58.449	ENSAPOG00000017267	raver1	85	50.702	Acanthochromis_polyacanthus
ENSCAFG00000017861	RAVER1	100	93.140	ENSAMEG00000011738	RAVER1	100	93.140	Ailuropoda_melanoleuca
ENSCAFG00000017861	RAVER1	68	57.812	ENSAOCG00000005128	raver1	90	50.070	Amphiprion_ocellaris
ENSCAFG00000017861	RAVER1	76	75.439	ENSAPEG00000010854	raver1	82	78.846	Amphiprion_percula
ENSCAFG00000017861	RAVER1	94	52.782	ENSATEG00000021004	raver1	91	51.783	Anabas_testudineus
ENSCAFG00000017861	RAVER1	81	63.040	ENSACAG00000008386	-	94	60.763	Anolis_carolinensis
ENSCAFG00000017861	RAVER1	100	89.564	ENSANAG00000028226	RAVER1	100	89.564	Aotus_nancymaae
ENSCAFG00000017861	RAVER1	94	51.351	ENSACLG00000018492	raver1	91	51.909	Astatotilapia_calliptera
ENSCAFG00000017861	RAVER1	97	50.970	ENSAMXG00000005132	raver1	72	55.780	Astyanax_mexicanus
ENSCAFG00000017861	RAVER1	100	95.362	ENSBTAG00000015721	RAVER1	100	95.923	Bos_taurus
ENSCAFG00000017861	RAVER1	100	89.564	ENSCJAG00000005671	RAVER1	100	89.564	Callithrix_jacchus
ENSCAFG00000017861	RAVER1	98	100.000	ENSCAFG00020024449	RAVER1	100	100.000	Canis_lupus_dingo
ENSCAFG00000017861	RAVER1	98	88.259	ENSCHIG00000006718	RAVER1	100	88.259	Capra_hircus
ENSCAFG00000017861	RAVER1	89	89.571	ENSTSYG00000027107	RAVER1	100	90.184	Carlito_syrichta
ENSCAFG00000017861	RAVER1	74	82.013	ENSCAPG00000002269	RAVER1	100	86.357	Cavia_aperea
ENSCAFG00000017861	RAVER1	98	87.838	ENSCPOG00000001008	RAVER1	100	87.838	Cavia_porcellus
ENSCAFG00000017861	RAVER1	100	89.418	ENSCCAG00000031723	RAVER1	100	89.550	Cebus_capucinus
ENSCAFG00000017861	RAVER1	100	90.212	ENSCATG00000043863	RAVER1	100	90.344	Cercocebus_atys
ENSCAFG00000017861	RAVER1	98	88.949	ENSCLAG00000009336	RAVER1	100	88.544	Chinchilla_lanigera
ENSCAFG00000017861	RAVER1	100	90.344	ENSCSAG00000007317	RAVER1	86	90.476	Chlorocebus_sabaeus
ENSCAFG00000017861	RAVER1	94	65.027	ENSCPBG00000005349	-	96	63.697	Chrysemys_picta_bellii
ENSCAFG00000017861	RAVER1	100	90.476	ENSCANG00000008337	RAVER1	100	90.608	Colobus_angolensis_palliatus
ENSCAFG00000017861	RAVER1	98	88.814	ENSCGRG00001013260	-	100	88.410	Cricetulus_griseus_chok1gshd
ENSCAFG00000017861	RAVER1	98	88.814	ENSCGRG00000015138	-	100	88.410	Cricetulus_griseus_crigri
ENSCAFG00000017861	RAVER1	83	78.846	ENSCSEG00000021092	raver1	87	78.846	Cynoglossus_semilaevis
ENSCAFG00000017861	RAVER1	95	51.456	ENSCVAG00000013971	raver1	93	49.659	Cyprinodon_variegatus
ENSCAFG00000017861	RAVER1	96	52.235	ENSDARG00000052617	raver1	93	52.454	Danio_rerio
ENSCAFG00000017861	RAVER1	73	93.243	ENSDNOG00000035742	-	77	93.243	Dasypus_novemcinctus
ENSCAFG00000017861	RAVER1	98	83.687	ENSDORG00000010106	-	100	82.759	Dipodomys_ordii
ENSCAFG00000017861	RAVER1	65	89.231	ENSETEG00000008201	-	74	89.340	Echinops_telfairi
ENSCAFG00000017861	RAVER1	66	95.782	ENSEASG00005010544	-	88	95.782	Equus_asinus_asinus
ENSCAFG00000017861	RAVER1	100	92.216	ENSECAG00000024966	RAVER1	100	91.821	Equus_caballus
ENSCAFG00000017861	RAVER1	95	52.817	ENSELUG00000023287	raver1	93	52.335	Esox_lucius
ENSCAFG00000017861	RAVER1	100	93.536	ENSFCAG00000009435	RAVER1	100	93.404	Felis_catus
ENSCAFG00000017861	RAVER1	98	88.275	ENSFDAG00000015113	RAVER1	100	88.275	Fukomys_damarensis
ENSCAFG00000017861	RAVER1	95	51.344	ENSGMOG00000003649	raver1	99	50.068	Gadus_morhua
ENSCAFG00000017861	RAVER1	76	43.869	ENSGALG00000050608	-	53	45.988	Gallus_gallus
ENSCAFG00000017861	RAVER1	99	51.946	ENSGAFG00000015944	raver1	94	50.880	Gambusia_affinis
ENSCAFG00000017861	RAVER1	50	67.575	ENSGACG00000013818	raver1	99	50.067	Gasterosteus_aculeatus
ENSCAFG00000017861	RAVER1	94	65.331	ENSGAGG00000011748	-	96	77.151	Gopherus_agassizii
ENSCAFG00000017861	RAVER1	100	89.815	ENSGGOG00000006015	RAVER1	100	89.815	Gorilla_gorilla
ENSCAFG00000017861	RAVER1	93	51.146	ENSHBUG00000021210	raver1	91	52.180	Haplochromis_burtoni
ENSCAFG00000017861	RAVER1	98	87.736	ENSHGLG00000015460	RAVER1	100	87.197	Heterocephalus_glaber_female
ENSCAFG00000017861	RAVER1	98	87.736	ENSHGLG00100000812	RAVER1	100	87.197	Heterocephalus_glaber_male
ENSCAFG00000017861	RAVER1	96	51.831	ENSHCOG00000000449	raver1	91	51.681	Hippocampus_comes
ENSCAFG00000017861	RAVER1	96	52.793	ENSIPUG00000013153	raver1	99	50.131	Ictalurus_punctatus
ENSCAFG00000017861	RAVER1	98	90.811	ENSSTOG00000003241	RAVER1	100	90.541	Ictidomys_tridecemlineatus
ENSCAFG00000017861	RAVER1	98	88.575	ENSJJAG00000018219	-	100	88.575	Jaculus_jaculus
ENSCAFG00000017861	RAVER1	94	51.763	ENSKMAG00000017355	raver1	91	51.336	Kryptolebias_marmoratus
ENSCAFG00000017861	RAVER1	87	50.837	ENSLBEG00000008268	raver1	70	58.383	Labrus_bergylta
ENSCAFG00000017861	RAVER1	88	60.694	ENSLACG00000005809	-	99	59.829	Latimeria_chalumnae
ENSCAFG00000017861	RAVER1	94	56.181	ENSLOCG00000007500	raver1	92	55.158	Lepisosteus_oculatus
ENSCAFG00000017861	RAVER1	98	90.296	ENSLAFG00000003664	-	96	95.000	Loxodonta_africana
ENSCAFG00000017861	RAVER1	100	89.815	ENSMFAG00000037977	RAVER1	100	89.947	Macaca_fascicularis
ENSCAFG00000017861	RAVER1	100	90.079	ENSMMUG00000014897	RAVER1	100	90.212	Macaca_mulatta
ENSCAFG00000017861	RAVER1	100	90.079	ENSMNEG00000028390	RAVER1	100	90.212	Macaca_nemestrina
ENSCAFG00000017861	RAVER1	100	90.212	ENSMLEG00000041959	RAVER1	100	90.344	Mandrillus_leucophaeus
ENSCAFG00000017861	RAVER1	95	51.536	ENSMAMG00000012059	raver1	93	50.836	Mastacembelus_armatus
ENSCAFG00000017861	RAVER1	94	51.494	ENSMZEG00005019002	raver1	91	51.617	Maylandia_zebra
ENSCAFG00000017861	RAVER1	98	88.038	ENSMAUG00000017948	-	100	87.366	Mesocricetus_auratus
ENSCAFG00000017861	RAVER1	99	94.694	ENSMICG00000010326	RAVER1	99	94.558	Microcebus_murinus
ENSCAFG00000017861	RAVER1	98	88.949	ENSMOCG00000015553	-	100	88.544	Microtus_ochrogaster
ENSCAFG00000017861	RAVER1	96	51.599	ENSMMOG00000012093	raver1	94	49.596	Mola_mola
ENSCAFG00000017861	RAVER1	96	79.383	ENSMODG00000005584	-	91	79.330	Monodelphis_domestica
ENSCAFG00000017861	RAVER1	95	50.904	ENSMALG00000016569	raver1	93	49.401	Monopterus_albus
ENSCAFG00000017861	RAVER1	98	86.765	MGP_CAROLIEiJ_G0031860	-	100	86.364	Mus_caroli
ENSCAFG00000017861	RAVER1	98	87.032	ENSMUSG00000010205	Raver1	100	86.765	Mus_musculus
ENSCAFG00000017861	RAVER1	98	85.771	MGP_PahariEiJ_G0014726	-	100	86.303	Mus_pahari
ENSCAFG00000017861	RAVER1	98	86.898	MGP_SPRETEiJ_G0032984	-	100	86.631	Mus_spretus
ENSCAFG00000017861	RAVER1	100	93.272	ENSMPUG00000006712	RAVER1	100	93.140	Mustela_putorius_furo
ENSCAFG00000017861	RAVER1	98	94.413	ENSMLUG00000012328	RAVER1	100	94.413	Myotis_lucifugus
ENSCAFG00000017861	RAVER1	98	88.092	ENSNGAG00000001260	-	100	87.551	Nannospalax_galili
ENSCAFG00000017861	RAVER1	94	46.362	ENSNBRG00000010139	raver1	91	46.379	Neolamprologus_brichardi
ENSCAFG00000017861	RAVER1	100	89.683	ENSNLEG00000012181	RAVER1	100	89.815	Nomascus_leucogenys
ENSCAFG00000017861	RAVER1	88	75.976	ENSMEUG00000003281	-	100	75.716	Notamacropus_eugenii
ENSCAFG00000017861	RAVER1	98	88.410	ENSODEG00000016260	RAVER1	100	88.140	Octodon_degus
ENSCAFG00000017861	RAVER1	94	53.247	ENSONIG00000001559	raver1	99	53.076	Oreochromis_niloticus
ENSCAFG00000017861	RAVER1	100	83.798	ENSOCUG00000020918	RAVER1	100	83.400	Oryctolagus_cuniculus
ENSCAFG00000017861	RAVER1	95	51.046	ENSORLG00020004392	raver1	69	66.019	Oryzias_latipes_hni
ENSCAFG00000017861	RAVER1	56	65.700	ENSORLG00015017222	raver1	56	65.700	Oryzias_latipes_hsok
ENSCAFG00000017861	RAVER1	95	49.648	ENSOMEG00000023956	raver1	69	81.633	Oryzias_melastigma
ENSCAFG00000017861	RAVER1	100	91.247	ENSOGAG00000011071	RAVER1	100	90.849	Otolemur_garnettii
ENSCAFG00000017861	RAVER1	100	85.770	ENSOARG00000015886	RAVER1	100	86.807	Ovis_aries
ENSCAFG00000017861	RAVER1	100	90.079	ENSPPAG00000002611	RAVER1	100	90.079	Pan_paniscus
ENSCAFG00000017861	RAVER1	100	94.459	ENSPPRG00000009912	RAVER1	100	94.459	Panthera_pardus
ENSCAFG00000017861	RAVER1	100	90.079	ENSPTRG00000010466	RAVER1	100	90.079	Pan_troglodytes
ENSCAFG00000017861	RAVER1	100	90.212	ENSPANG00000004122	RAVER1	100	90.344	Papio_anubis
ENSCAFG00000017861	RAVER1	98	88.964	ENSPEMG00000016411	-	100	89.233	Peromyscus_maniculatus_bairdii
ENSCAFG00000017861	RAVER1	98	80.939	ENSPCIG00000018695	-	100	79.806	Phascolarctos_cinereus
ENSCAFG00000017861	RAVER1	95	52.617	ENSPFOG00000007016	raver1	94	50.134	Poecilia_formosa
ENSCAFG00000017861	RAVER1	62	69.722	ENSPLAG00000020793	raver1	63	68.571	Poecilia_latipinna
ENSCAFG00000017861	RAVER1	98	52.394	ENSPMEG00000011220	raver1	94	50.674	Poecilia_mexicana
ENSCAFG00000017861	RAVER1	95	51.257	ENSPREG00000006864	raver1	92	50.000	Poecilia_reticulata
ENSCAFG00000017861	RAVER1	100	89.007	ENSPPYG00000010514	RAVER1	85	89.550	Pongo_abelii
ENSCAFG00000017861	RAVER1	100	91.447	ENSPCOG00000026605	RAVER1	100	91.316	Propithecus_coquereli
ENSCAFG00000017861	RAVER1	98	91.588	ENSPVAG00000003689	RAVER1	100	90.773	Pteropus_vampyrus
ENSCAFG00000017861	RAVER1	96	52.909	ENSPNAG00000015476	raver1	94	52.221	Pygocentrus_nattereri
ENSCAFG00000017861	RAVER1	98	86.364	ENSRNOG00000020710	Raver1	100	86.497	Rattus_norvegicus
ENSCAFG00000017861	RAVER1	100	92.779	ENSRBIG00000034702	RAVER1	100	93.052	Rhinopithecus_bieti
ENSCAFG00000017861	RAVER1	100	93.052	ENSRROG00000031186	RAVER1	100	93.052	Rhinopithecus_roxellana
ENSCAFG00000017861	RAVER1	100	92.507	ENSSBOG00000023423	RAVER1	100	92.371	Saimiri_boliviensis_boliviensis
ENSCAFG00000017861	RAVER1	88	80.245	ENSSHAG00000008181	-	90	79.939	Sarcophilus_harrisii
ENSCAFG00000017861	RAVER1	69	56.897	ENSSMAG00000004546	raver1	93	50.273	Scophthalmus_maximus
ENSCAFG00000017861	RAVER1	96	51.370	ENSSDUG00000021063	raver1	94	51.604	Seriola_dumerili
ENSCAFG00000017861	RAVER1	96	51.043	ENSSLDG00000014505	raver1	94	51.182	Seriola_lalandi_dorsalis
ENSCAFG00000017861	RAVER1	98	95.391	ENSSSCG00000013650	-	100	95.112	Sus_scrofa
ENSCAFG00000017861	RAVER1	97	51.040	ENSTRUG00000025641	raver1	67	57.647	Takifugu_rubripes
ENSCAFG00000017861	RAVER1	98	91.452	ENSTTRG00000009552	RAVER1	100	91.452	Tursiops_truncatus
ENSCAFG00000017861	RAVER1	100	95.119	ENSUAMG00000020385	RAVER1	100	95.119	Ursus_americanus
ENSCAFG00000017861	RAVER1	100	99.727	ENSVVUG00000028976	RAVER1	100	99.727	Vulpes_vulpes
ENSCAFG00000017861	RAVER1	98	56.702	ENSXETG00000011622	raver1	100	55.214	Xenopus_tropicalis
ENSCAFG00000017861	RAVER1	97	52.006	ENSXCOG00000016368	raver1	94	50.763	Xiphophorus_couchianus
ENSCAFG00000017861	RAVER1	97	52.427	ENSXMAG00000000217	raver1	94	50.831	Xiphophorus_maculatus