EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAFG00000018174 (Gene tree)
Gene ID: 100683775
Gene Symbol: RPS15A
Alias: -
Full Name: ribosomal protein S15a
Gene Type: protein_coding
Species: Canis_familiaris
Status: putative
Strand: Plus strand
Length: 20457 bases
Position: chr6:26309073-26329529
Accession: 100683775
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00000041534	Ribosomal_S8	PF00410.19	2.3e-22	1	1
ENSCAFP00000026846	Ribosomal_S8	PF00410.19	3.6e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00000028868	-	929	-	ENSCAFP00000026846	237 (aa)	-	E2RPP2
ENSCAFT00000049736	-	561	-	ENSCAFP00000041534	130 (aa)	-	J9P798

Gene Model

Click here to download ENSCAFG00000018174's gene model file

Pathways

Pathway ID	Pathway Name	Source
cfa03010	Ribosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00000018174's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAFG00000018174	RPS15A	55	95.775	ENSCAFG00000032283	-	68	95.775
ENSCAFG00000018174	RPS15A	99	96.124	ENSCAFG00000024445	-	99	96.124
ENSCAFG00000018174	RPS15A	97	76.984	ENSCAFG00000013315	-	100	76.984
ENSCAFG00000018174	RPS15A	100	81.538	ENSCAFG00000024090	-	100	81.538
ENSCAFG00000018174	RPS15A	100	93.846	ENSCAFG00000024508	-	100	93.846

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00000018174	RPS15A	100	100.000	ENSCSAG00000007955	-	68	99.156	Chlorocebus_sabaeus
ENSCAFG00000018174	RPS15A	100	81.857	ENSMMUG00000005593	-	100	81.857	Macaca_mulatta
ENSCAFG00000018174	RPS15A	100	100.000	ENSOANG00000012228	-	78	95.192	Ornithorhynchus_anatinus