EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAFG00000018275 (Gene tree)
Gene ID: 489190
Gene Symbol: PPARGC1B
Alias: -
Full Name: PPARG coactivator 1 beta
Gene Type: protein_coding
Species: Canis_familiaris
Status: putative
Strand: Minus strand
Length: 104321 bases
Position: chr4:59174604-59278924
Accession: 44838
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00000027002	RRM_1	PF00076.22	3.5e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00000029039	-	3087	XM_003434527	ENSCAFP00000027002	1028 (aa)	XP_005619363	F1PUV7

Gene Model

Click here to download ENSCAFG00000018275's gene model file

Pathways

Pathway ID	Pathway Name	Source
cfa04931	Insulin resistance	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00000018275's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAFG00000018275	PPARGC1B	53	48.529	ENSCAFG00000016519	PPARGC1A	68	48.529

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00000018275	PPARGC1B	100	84.816	ENSG00000155846	PPARGC1B	100	85.010	Homo_sapiens
ENSCAFG00000018275	PPARGC1B	53	48.529	ENSG00000109819	PPARGC1A	68	48.529	Homo_sapiens
ENSCAFG00000018275	PPARGC1B	50	54.962	ENSAPOG00000018632	ppargc1a	68	54.962	Acanthochromis_polyacanthus
ENSCAFG00000018275	PPARGC1B	100	93.197	ENSAMEG00000005287	PPARGC1B	100	93.197	Ailuropoda_melanoleuca
ENSCAFG00000018275	PPARGC1B	50	54.962	ENSAOCG00000006754	ppargc1a	68	54.962	Amphiprion_ocellaris
ENSCAFG00000018275	PPARGC1B	50	54.962	ENSAPEG00000022574	ppargc1a	67	54.962	Amphiprion_percula
ENSCAFG00000018275	PPARGC1B	50	53.435	ENSATEG00000016702	ppargc1a	56	53.435	Anabas_testudineus
ENSCAFG00000018275	PPARGC1B	100	48.844	ENSACAG00000015737	PPARGC1B	55	52.604	Anolis_carolinensis
ENSCAFG00000018275	PPARGC1B	54	49.265	ENSACAG00000000741	PPARGC1A	70	49.265	Anolis_carolinensis
ENSCAFG00000018275	PPARGC1B	54	48.529	ENSANAG00000035930	PPARGC1A	69	48.529	Aotus_nancymaae
ENSCAFG00000018275	PPARGC1B	100	84.831	ENSANAG00000021830	PPARGC1B	100	85.121	Aotus_nancymaae
ENSCAFG00000018275	PPARGC1B	68	46.825	ENSAMXG00000010665	ppargc1b	77	46.825	Astyanax_mexicanus
ENSCAFG00000018275	PPARGC1B	53	52.672	ENSAMXG00000002461	ppargc1a	64	52.672	Astyanax_mexicanus
ENSCAFG00000018275	PPARGC1B	100	85.257	ENSBTAG00000012943	PPARGC1B	100	85.354	Bos_taurus
ENSCAFG00000018275	PPARGC1B	53	48.529	ENSCJAG00000013024	PPARGC1A	69	48.529	Callithrix_jacchus
ENSCAFG00000018275	PPARGC1B	100	85.106	ENSCJAG00000021113	PPARGC1B	100	84.185	Callithrix_jacchus
ENSCAFG00000018275	PPARGC1B	100	96.206	ENSCAFG00020023524	PPARGC1B	100	96.206	Canis_lupus_dingo
ENSCAFG00000018275	PPARGC1B	52	48.529	ENSCAFG00020027242	PPARGC1A	69	48.529	Canis_lupus_dingo
ENSCAFG00000018275	PPARGC1B	52	50.769	ENSCHIG00000015991	PPARGC1A	68	50.769	Capra_hircus
ENSCAFG00000018275	PPARGC1B	100	83.930	ENSCHIG00000004409	PPARGC1B	100	84.027	Capra_hircus
ENSCAFG00000018275	PPARGC1B	53	50.382	ENSTSYG00000010439	PPARGC1A	70	48.529	Carlito_syrichta
ENSCAFG00000018275	PPARGC1B	97	74.776	ENSTSYG00000034354	PPARGC1B	99	75.052	Carlito_syrichta
ENSCAFG00000018275	PPARGC1B	98	75.791	ENSCAPG00000008859	PPARGC1B	99	75.198	Cavia_aperea
ENSCAFG00000018275	PPARGC1B	100	79.653	ENSCPOG00000001958	PPARGC1B	100	80.039	Cavia_porcellus
ENSCAFG00000018275	PPARGC1B	100	85.092	ENSCCAG00000026909	PPARGC1B	100	85.576	Cebus_capucinus
ENSCAFG00000018275	PPARGC1B	52	50.382	ENSCCAG00000024681	PPARGC1A	68	48.529	Cebus_capucinus
ENSCAFG00000018275	PPARGC1B	100	83.494	ENSCATG00000030402	PPARGC1B	100	83.784	Cercocebus_atys
ENSCAFG00000018275	PPARGC1B	52	50.382	ENSCATG00000032575	PPARGC1A	69	48.529	Cercocebus_atys
ENSCAFG00000018275	PPARGC1B	54	46.753	ENSCLAG00000002058	PPARGC1A	70	46.753	Chinchilla_lanigera
ENSCAFG00000018275	PPARGC1B	100	79.440	ENSCLAG00000015452	PPARGC1B	100	79.826	Chinchilla_lanigera
ENSCAFG00000018275	PPARGC1B	53	48.529	ENSCSAG00000016575	PPARGC1A	68	48.529	Chlorocebus_sabaeus
ENSCAFG00000018275	PPARGC1B	98	85.020	ENSCSAG00000011792	PPARGC1B	100	85.020	Chlorocebus_sabaeus
ENSCAFG00000018275	PPARGC1B	63	88.095	ENSCHOG00000005517	-	68	88.095	Choloepus_hoffmanni
ENSCAFG00000018275	PPARGC1B	99	50.698	ENSCPBG00000007891	PPARGC1B	99	49.002	Chrysemys_picta_bellii
ENSCAFG00000018275	PPARGC1B	52	50.382	ENSCANG00000033426	PPARGC1A	68	48.529	Colobus_angolensis_palliatus
ENSCAFG00000018275	PPARGC1B	100	84.363	ENSCANG00000037487	PPARGC1B	100	84.459	Colobus_angolensis_palliatus
ENSCAFG00000018275	PPARGC1B	53	47.059	ENSCGRG00001015534	Ppargc1a	68	47.059	Cricetulus_griseus_chok1gshd
ENSCAFG00000018275	PPARGC1B	98	76.634	ENSCGRG00001017949	Ppargc1b	96	76.535	Cricetulus_griseus_chok1gshd
ENSCAFG00000018275	PPARGC1B	98	76.139	ENSCGRG00000008387	Ppargc1b	98	76.266	Cricetulus_griseus_crigri
ENSCAFG00000018275	PPARGC1B	53	47.059	ENSCGRG00000000200	Ppargc1a	68	47.059	Cricetulus_griseus_crigri
ENSCAFG00000018275	PPARGC1B	51	44.785	ENSCSEG00000006884	ppargc1a	71	44.785	Cynoglossus_semilaevis
ENSCAFG00000018275	PPARGC1B	62	40.411	ENSDARG00000101569	ppargc1b	76	40.411	Danio_rerio
ENSCAFG00000018275	PPARGC1B	92	89.441	ENSDNOG00000005985	PPARGC1B	99	89.441	Dasypus_novemcinctus
ENSCAFG00000018275	PPARGC1B	100	75.942	ENSDORG00000012605	Ppargc1b	100	76.329	Dipodomys_ordii
ENSCAFG00000018275	PPARGC1B	100	85.121	ENSEASG00005002826	PPARGC1B	100	84.058	Equus_asinus_asinus
ENSCAFG00000018275	PPARGC1B	100	85.977	ENSECAG00000019769	PPARGC1B	83	86.074	Equus_caballus
ENSCAFG00000018275	PPARGC1B	79	82.589	ENSEEUG00000014903	PPARGC1B	86	83.482	Erinaceus_europaeus
ENSCAFG00000018275	PPARGC1B	58	41.206	ENSEEUG00000009219	PPARGC1A	70	47.794	Erinaceus_europaeus
ENSCAFG00000018275	PPARGC1B	64	44.882	ENSELUG00000014929	ppargc1b	73	44.882	Esox_lucius
ENSCAFG00000018275	PPARGC1B	97	50.982	ENSFALG00000008858	PPARGC1B	99	50.097	Ficedula_albicollis
ENSCAFG00000018275	PPARGC1B	97	77.525	ENSFDAG00000008719	PPARGC1B	99	78.008	Fukomys_damarensis
ENSCAFG00000018275	PPARGC1B	91	75.325	ENSGAGG00000012870	PPARGC1B	67	74.074	Gopherus_agassizii
ENSCAFG00000018275	PPARGC1B	56	46.961	ENSGAGG00000007043	PPARGC1A	55	50.588	Gopherus_agassizii
ENSCAFG00000018275	PPARGC1B	53	48.529	ENSGGOG00000009810	PPARGC1A	68	48.529	Gorilla_gorilla
ENSCAFG00000018275	PPARGC1B	97	83.019	ENSGGOG00000009505	PPARGC1B	99	84.310	Gorilla_gorilla
ENSCAFG00000018275	PPARGC1B	100	80.445	ENSHGLG00000005967	PPARGC1B	100	80.445	Heterocephalus_glaber_female
ENSCAFG00000018275	PPARGC1B	100	75.121	ENSHGLG00100010588	PPARGC1B	100	74.638	Heterocephalus_glaber_male
ENSCAFG00000018275	PPARGC1B	100	82.517	ENSSTOG00000024758	PPARGC1B	100	83.477	Ictidomys_tridecemlineatus
ENSCAFG00000018275	PPARGC1B	100	76.499	ENSJJAG00000018633	Ppargc1b	100	76.567	Jaculus_jaculus
ENSCAFG00000018275	PPARGC1B	97	37.598	ENSLACG00000011232	PPARGC1B	100	37.132	Latimeria_chalumnae
ENSCAFG00000018275	PPARGC1B	52	54.962	ENSLOCG00000012350	ppargc1a	66	54.962	Lepisosteus_oculatus
ENSCAFG00000018275	PPARGC1B	84	44.720	ENSLOCG00000012195	ppargc1b	76	46.269	Lepisosteus_oculatus
ENSCAFG00000018275	PPARGC1B	98	83.647	ENSLAFG00000012339	PPARGC1B	99	82.993	Loxodonta_africana
ENSCAFG00000018275	PPARGC1B	100	85.397	ENSMFAG00000042269	PPARGC1B	100	85.493	Macaca_fascicularis
ENSCAFG00000018275	PPARGC1B	53	48.529	ENSMFAG00000000534	PPARGC1A	68	48.529	Macaca_fascicularis
ENSCAFG00000018275	PPARGC1B	53	48.529	ENSMMUG00000001844	PPARGC1A	68	48.529	Macaca_mulatta
ENSCAFG00000018275	PPARGC1B	100	85.397	ENSMMUG00000004749	PPARGC1B	100	85.493	Macaca_mulatta
ENSCAFG00000018275	PPARGC1B	52	50.382	ENSMNEG00000028682	PPARGC1A	68	50.382	Macaca_nemestrina
ENSCAFG00000018275	PPARGC1B	100	85.687	ENSMNEG00000034121	PPARGC1B	100	85.783	Macaca_nemestrina
ENSCAFG00000018275	PPARGC1B	53	48.529	ENSMLEG00000034233	PPARGC1A	68	48.529	Mandrillus_leucophaeus
ENSCAFG00000018275	PPARGC1B	97	85.104	ENSMLEG00000040973	PPARGC1B	99	85.204	Mandrillus_leucophaeus
ENSCAFG00000018275	PPARGC1B	97	45.878	ENSMGAG00000003134	PPARGC1B	100	45.490	Meleagris_gallopavo
ENSCAFG00000018275	PPARGC1B	53	50.735	ENSMGAG00000012485	PPARGC1A	68	50.735	Meleagris_gallopavo
ENSCAFG00000018275	PPARGC1B	100	75.869	ENSMAUG00000014191	Ppargc1b	100	75.579	Mesocricetus_auratus
ENSCAFG00000018275	PPARGC1B	52	48.529	ENSMAUG00000011811	Ppargc1a	68	48.529	Mesocricetus_auratus
ENSCAFG00000018275	PPARGC1B	100	83.883	ENSMICG00000002702	PPARGC1B	100	84.078	Microcebus_murinus
ENSCAFG00000018275	PPARGC1B	54	48.529	ENSMICG00000015390	PPARGC1A	68	48.529	Microcebus_murinus
ENSCAFG00000018275	PPARGC1B	52	47.794	ENSMOCG00000008765	Ppargc1a	67	47.794	Microtus_ochrogaster
ENSCAFG00000018275	PPARGC1B	100	76.301	ENSMOCG00000014885	Ppargc1b	100	75.723	Microtus_ochrogaster
ENSCAFG00000018275	PPARGC1B	97	59.556	ENSMODG00000009891	PPARGC1B	99	57.950	Monodelphis_domestica
ENSCAFG00000018275	PPARGC1B	52	47.059	MGP_CAROLIEiJ_G0027213	Ppargc1a	54	47.917	Mus_caroli
ENSCAFG00000018275	PPARGC1B	100	76.708	MGP_CAROLIEiJ_G0022323	Ppargc1b	100	76.834	Mus_caroli
ENSCAFG00000018275	PPARGC1B	52	47.059	ENSMUSG00000029167	Ppargc1a	67	47.059	Mus_musculus
ENSCAFG00000018275	PPARGC1B	100	76.663	ENSMUSG00000033871	Ppargc1b	100	76.737	Mus_musculus
ENSCAFG00000018275	PPARGC1B	100	75.981	MGP_PahariEiJ_G0019053	Ppargc1b	100	76.227	Mus_pahari
ENSCAFG00000018275	PPARGC1B	53	46.104	MGP_PahariEiJ_G0016995	Ppargc1a	55	47.917	Mus_pahari
ENSCAFG00000018275	PPARGC1B	100	76.908	MGP_SPRETEiJ_G0023235	Ppargc1b	100	76.886	Mus_spretus
ENSCAFG00000018275	PPARGC1B	52	47.059	MGP_SPRETEiJ_G0028208	Ppargc1a	67	47.059	Mus_spretus
ENSCAFG00000018275	PPARGC1B	100	92.218	ENSMPUG00000014245	PPARGC1B	100	92.121	Mustela_putorius_furo
ENSCAFG00000018275	PPARGC1B	56	43.716	ENSMLUG00000016307	PPARGC1A	68	48.529	Myotis_lucifugus
ENSCAFG00000018275	PPARGC1B	92	78.782	ENSMLUG00000013169	PPARGC1B	100	78.992	Myotis_lucifugus
ENSCAFG00000018275	PPARGC1B	99	78.058	ENSNGAG00000016998	Ppargc1b	99	78.155	Nannospalax_galili
ENSCAFG00000018275	PPARGC1B	53	48.529	ENSNLEG00000016760	PPARGC1A	68	48.529	Nomascus_leucogenys
ENSCAFG00000018275	PPARGC1B	100	81.528	ENSNLEG00000010193	PPARGC1B	100	81.818	Nomascus_leucogenys
ENSCAFG00000018275	PPARGC1B	97	76.143	ENSOPRG00000010017	PPARGC1B	99	76.938	Ochotona_princeps
ENSCAFG00000018275	PPARGC1B	52	49.618	ENSOPRG00000012899	PPARGC1A	68	47.794	Ochotona_princeps
ENSCAFG00000018275	PPARGC1B	100	76.112	ENSODEG00000004901	PPARGC1B	100	75.532	Octodon_degus
ENSCAFG00000018275	PPARGC1B	52	51.145	ENSOANG00000006680	PPARGC1A	68	51.145	Ornithorhynchus_anatinus
ENSCAFG00000018275	PPARGC1B	97	53.802	ENSOANG00000009368	PPARGC1B	99	53.513	Ornithorhynchus_anatinus
ENSCAFG00000018275	PPARGC1B	53	48.529	ENSOCUG00000014668	PPARGC1A	68	48.529	Oryctolagus_cuniculus
ENSCAFG00000018275	PPARGC1B	98	79.961	ENSOCUG00000013833	PPARGC1B	100	80.257	Oryctolagus_cuniculus
ENSCAFG00000018275	PPARGC1B	98	79.386	ENSOGAG00000015983	PPARGC1B	99	79.300	Otolemur_garnettii
ENSCAFG00000018275	PPARGC1B	98	82.647	ENSOARG00000005658	PPARGC1B	98	82.647	Ovis_aries
ENSCAFG00000018275	PPARGC1B	52	50.769	ENSOARG00000005581	PPARGC1A	66	50.769	Ovis_aries
ENSCAFG00000018275	PPARGC1B	97	84.310	ENSPPAG00000035226	PPARGC1B	99	84.608	Pan_paniscus
ENSCAFG00000018275	PPARGC1B	52	50.382	ENSPPAG00000034694	PPARGC1A	68	48.529	Pan_paniscus
ENSCAFG00000018275	PPARGC1B	100	90.909	ENSPPRG00000004608	PPARGC1B	100	91.296	Panthera_pardus
ENSCAFG00000018275	PPARGC1B	100	88.996	ENSPTIG00000007391	PPARGC1B	100	88.996	Panthera_tigris_altaica
ENSCAFG00000018275	PPARGC1B	53	48.529	ENSPTRG00000015954	PPARGC1A	68	48.529	Pan_troglodytes
ENSCAFG00000018275	PPARGC1B	100	84.526	ENSPTRG00000017403	PPARGC1B	100	84.816	Pan_troglodytes
ENSCAFG00000018275	PPARGC1B	100	85.300	ENSPANG00000009512	PPARGC1B	100	85.397	Papio_anubis
ENSCAFG00000018275	PPARGC1B	53	48.529	ENSPANG00000005420	PPARGC1A	68	48.529	Papio_anubis
ENSCAFG00000018275	PPARGC1B	99	51.866	ENSPSIG00000008358	PPARGC1B	99	50.943	Pelodiscus_sinensis
ENSCAFG00000018275	PPARGC1B	100	77.628	ENSPEMG00000018822	Ppargc1b	100	76.953	Peromyscus_maniculatus_bairdii
ENSCAFG00000018275	PPARGC1B	53	47.794	ENSPEMG00000010892	Ppargc1a	68	47.794	Peromyscus_maniculatus_bairdii
ENSCAFG00000018275	PPARGC1B	89	57.834	ENSPCIG00000020102	PPARGC1B	99	56.737	Phascolarctos_cinereus
ENSCAFG00000018275	PPARGC1B	53	47.794	ENSPCIG00000015835	PPARGC1A	68	47.794	Phascolarctos_cinereus
ENSCAFG00000018275	PPARGC1B	100	85.010	ENSPPYG00000015938	PPARGC1B	100	85.300	Pongo_abelii
ENSCAFG00000018275	PPARGC1B	53	48.529	ENSPPYG00000014640	PPARGC1A	68	48.529	Pongo_abelii
ENSCAFG00000018275	PPARGC1B	80	85.882	ENSPCAG00000012171	PPARGC1B	80	86.471	Procavia_capensis
ENSCAFG00000018275	PPARGC1B	52	50.382	ENSPCAG00000016308	PPARGC1A	68	48.529	Procavia_capensis
ENSCAFG00000018275	PPARGC1B	100	85.909	ENSPCOG00000024059	PPARGC1B	100	85.909	Propithecus_coquereli
ENSCAFG00000018275	PPARGC1B	100	86.006	ENSPVAG00000001308	PPARGC1B	100	85.700	Pteropus_vampyrus
ENSCAFG00000018275	PPARGC1B	52	52.672	ENSPNAG00000010393	ppargc1a	60	52.672	Pygocentrus_nattereri
ENSCAFG00000018275	PPARGC1B	53	47.794	ENSRNOG00000004473	Ppargc1a	68	49.618	Rattus_norvegicus
ENSCAFG00000018275	PPARGC1B	100	77.273	ENSRNOG00000017503	Ppargc1b	100	77.273	Rattus_norvegicus
ENSCAFG00000018275	PPARGC1B	52	50.382	ENSRBIG00000032333	PPARGC1A	68	48.529	Rhinopithecus_bieti
ENSCAFG00000018275	PPARGC1B	100	84.348	ENSRBIG00000036724	PPARGC1B	100	84.541	Rhinopithecus_bieti
ENSCAFG00000018275	PPARGC1B	52	50.382	ENSRROG00000010419	PPARGC1A	69	48.529	Rhinopithecus_roxellana
ENSCAFG00000018275	PPARGC1B	97	84.263	ENSRROG00000029594	PPARGC1B	97	84.425	Rhinopithecus_roxellana
ENSCAFG00000018275	PPARGC1B	100	84.318	ENSSBOG00000028738	PPARGC1B	100	84.802	Saimiri_boliviensis_boliviensis
ENSCAFG00000018275	PPARGC1B	53	48.529	ENSSBOG00000006423	PPARGC1A	69	48.529	Saimiri_boliviensis_boliviensis
ENSCAFG00000018275	PPARGC1B	99	58.733	ENSSHAG00000016400	PPARGC1B	99	57.905	Sarcophilus_harrisii
ENSCAFG00000018275	PPARGC1B	56	44.022	ENSSHAG00000010033	PPARGC1A	66	47.794	Sarcophilus_harrisii
ENSCAFG00000018275	PPARGC1B	52	55.725	ENSSFOG00015001633	ppargc1a	59	55.725	Scleropages_formosus
ENSCAFG00000018275	PPARGC1B	53	48.333	ENSSFOG00015018522	ppargc1a	60	51.961	Scleropages_formosus
ENSCAFG00000018275	PPARGC1B	50	54.198	ENSSMAG00000011571	ppargc1a	65	54.198	Scophthalmus_maximus
ENSCAFG00000018275	PPARGC1B	51	49.593	ENSSARG00000000575	PPARGC1A	53	49.593	Sorex_araneus
ENSCAFG00000018275	PPARGC1B	99	50.000	ENSSPUG00000019271	PPARGC1B	99	49.904	Sphenodon_punctatus
ENSCAFG00000018275	PPARGC1B	53	50.000	ENSSPUG00000013556	PPARGC1A	68	50.000	Sphenodon_punctatus
ENSCAFG00000018275	PPARGC1B	50	54.962	ENSSPAG00000023514	ppargc1a	67	54.962	Stegastes_partitus
ENSCAFG00000018275	PPARGC1B	53	48.529	ENSSSCG00000029275	PPARGC1A	69	48.529	Sus_scrofa
ENSCAFG00000018275	PPARGC1B	100	79.054	ENSSSCG00000014437	PPARGC1B	100	79.151	Sus_scrofa
ENSCAFG00000018275	PPARGC1B	97	49.901	ENSTGUG00000000232	PPARGC1B	100	49.608	Taeniopygia_guttata
ENSCAFG00000018275	PPARGC1B	62	36.239	ENSTGUG00000009487	PPARGC1A	92	36.697	Taeniopygia_guttata
ENSCAFG00000018275	PPARGC1B	62	37.156	ENSTTRG00000005327	PPARGC1A	52	37.981	Tursiops_truncatus
ENSCAFG00000018275	PPARGC1B	99	86.404	ENSTTRG00000008430	PPARGC1B	100	86.305	Tursiops_truncatus
ENSCAFG00000018275	PPARGC1B	99	91.699	ENSUMAG00000005361	PPARGC1B	99	91.699	Ursus_maritimus
ENSCAFG00000018275	PPARGC1B	53	48.529	ENSVVUG00000013365	PPARGC1A	68	48.529	Vulpes_vulpes
ENSCAFG00000018275	PPARGC1B	100	99.319	ENSVVUG00000014358	PPARGC1B	100	99.319	Vulpes_vulpes
ENSCAFG00000018275	PPARGC1B	88	45.648	ENSXETG00000012711	ppargc1b	96	45.811	Xenopus_tropicalis