EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAFG00000018679 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Canis_familiaris
Status: putative
Strand: Plus strand
Length: 645 bases
Position: chr4:71232574-71233218
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00000039246	Ribosomal_L1	PF00687.21	8.2e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00000029650	-	624	-	ENSCAFP00000039246	207 (aa)	-	J9P122

Gene Model

Click here to download ENSCAFG00000018679's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00000018679's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAFG00000018679	-	99	89.815	ENSCAFG00000001318	RPL10A	99	88.889
ENSCAFG00000018679	-	83	70.455	ENSCAFG00000008419	-	100	70.455
ENSCAFG00000018679	-	75	70.732	ENSCAFG00000017363	-	84	68.902

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00000018679	-	70	66.207	ENSANAG00000038119	-	85	69.655	Aotus_nancymaae
ENSCAFG00000018679	-	98	67.925	ENSFCAG00000030405	-	94	67.925	Felis_catus
ENSCAFG00000018679	-	57	72.500	ENSFCAG00000041512	-	72	70.909	Felis_catus
ENSCAFG00000018679	-	100	74.194	ENSGGOG00000027388	-	100	69.444	Gorilla_gorilla
ENSCAFG00000018679	-	97	61.905	ENSOARG00000020392	-	99	56.667	Ovis_aries
ENSCAFG00000018679	-	100	68.056	ENSPEMG00000011160	-	98	71.296	Peromyscus_maniculatus_bairdii
ENSCAFG00000018679	-	91	81.910	ENSSBOG00000029918	-	97	80.905	Saimiri_boliviensis_boliviensis
ENSCAFG00000018679	-	70	77.551	ENSSSCG00000039478	-	96	72.789	Sus_scrofa
ENSCAFG00000018679	-	100	75.576	ENSSSCG00000011206	-	100	72.350	Sus_scrofa