EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCAFG00000018795 (Gene tree)
Gene ID: 479839
Gene Symbol: PARN
Alias: -
Full Name: poly(A)-specific ribonuclease
Gene Type: protein_coding
Species: Canis_familiaris
Status: putative
Strand: Plus strand
Length: 155390 bases
Position: chr6:28629132-28784521
Accession: 53535
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00000027732	RNA_bind	PF08675.11	7.2e-34	1	1
ENSCAFP00000027732	CAF1	PF04857.20	4.7e-89	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00000029839	-	3186	XM_003434851	ENSCAFP00000027732	638 (aa)	XP_536966	F6XU41

Gene Model

Click here to download ENSCAFG00000018795's gene model file

Pathways

Pathway ID	Pathway Name	Source
cfa03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00000018795's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00000018795	PARN	100	92.958	ENSG00000140694	PARN	100	94.915	Homo_sapiens
ENSCAFG00000018795	PARN	100	96.557	ENSAMEG00000011208	PARN	100	96.557	Ailuropoda_melanoleuca
ENSCAFG00000018795	PARN	83	75.373	ENSACIG00000000619	parn	83	75.373	Amphilophus_citrinellus
ENSCAFG00000018795	PARN	83	77.903	ENSAOCG00000003465	parn	78	77.903	Amphiprion_ocellaris
ENSCAFG00000018795	PARN	74	77.801	ENSAPEG00000010661	parn	91	77.801	Amphiprion_percula
ENSCAFG00000018795	PARN	83	78.731	ENSATEG00000004661	parn	78	78.731	Anabas_testudineus
ENSCAFG00000018795	PARN	99	82.622	ENSAPLG00000013914	PARN	99	82.622	Anas_platyrhynchos
ENSCAFG00000018795	PARN	100	77.385	ENSACAG00000004973	PARN	100	77.538	Anolis_carolinensis
ENSCAFG00000018795	PARN	100	91.706	ENSANAG00000031516	PARN	100	94.915	Aotus_nancymaae
ENSCAFG00000018795	PARN	90	74.266	ENSACLG00000004742	parn	83	74.266	Astatotilapia_calliptera
ENSCAFG00000018795	PARN	100	66.769	ENSAMXG00000012390	parn	100	66.769	Astyanax_mexicanus
ENSCAFG00000018795	PARN	100	91.693	ENSBTAG00000018097	PARN	100	94.454	Bos_taurus
ENSCAFG00000018795	PARN	100	92.175	ENSCJAG00000015866	PARN	100	94.915	Callithrix_jacchus
ENSCAFG00000018795	PARN	100	99.687	ENSCAFG00020024126	PARN	100	99.687	Canis_lupus_dingo
ENSCAFG00000018795	PARN	100	94.828	ENSCHIG00000018143	PARN	100	94.828	Capra_hircus
ENSCAFG00000018795	PARN	73	62.162	ENSCAPG00000007984	PARN	78	62.162	Cavia_aperea
ENSCAFG00000018795	PARN	100	89.028	ENSCPOG00000002263	PARN	100	89.028	Cavia_porcellus
ENSCAFG00000018795	PARN	100	92.488	ENSCCAG00000030367	PARN	100	94.915	Cebus_capucinus
ENSCAFG00000018795	PARN	90	96.552	ENSCATG00000041368	PARN	100	96.552	Cercocebus_atys
ENSCAFG00000018795	PARN	100	89.812	ENSCLAG00000015406	PARN	99	89.812	Chinchilla_lanigera
ENSCAFG00000018795	PARN	100	93.114	ENSCSAG00000008142	PARN	100	93.114	Chlorocebus_sabaeus
ENSCAFG00000018795	PARN	99	76.387	ENSCHOG00000007014	PARN	100	76.387	Choloepus_hoffmanni
ENSCAFG00000018795	PARN	88	83.688	ENSCPBG00000006609	PARN	97	83.889	Chrysemys_picta_bellii
ENSCAFG00000018795	PARN	80	44.278	ENSCING00000010142	-	99	44.278	Ciona_intestinalis
ENSCAFG00000018795	PARN	100	80.547	ENSCANG00000028849	-	100	94.915	Colobus_angolensis_palliatus
ENSCAFG00000018795	PARN	100	84.711	ENSCGRG00001012096	Parn	100	84.711	Cricetulus_griseus_chok1gshd
ENSCAFG00000018795	PARN	100	84.711	ENSCGRG00000004939	Parn	100	84.711	Cricetulus_griseus_crigri
ENSCAFG00000018795	PARN	96	67.742	ENSCSEG00000002064	parn	100	62.896	Cynoglossus_semilaevis
ENSCAFG00000018795	PARN	83	77.239	ENSCVAG00000014848	parn	79	77.239	Cyprinodon_variegatus
ENSCAFG00000018795	PARN	100	63.581	ENSDARG00000102634	parn	100	63.526	Danio_rerio
ENSCAFG00000018795	PARN	100	92.790	ENSDNOG00000000833	PARN	98	95.144	Dasypus_novemcinctus
ENSCAFG00000018795	PARN	74	92.395	ENSETEG00000014828	-	69	92.395	Echinops_telfairi
ENSCAFG00000018795	PARN	100	94.044	ENSEASG00005011400	PARN	100	94.044	Equus_asinus_asinus
ENSCAFG00000018795	PARN	100	93.887	ENSECAG00000017792	PARN	100	93.887	Equus_caballus
ENSCAFG00000018795	PARN	86	82.805	ENSEEUG00000010370	PARN	86	82.805	Erinaceus_europaeus
ENSCAFG00000018795	PARN	89	72.145	ENSELUG00000013139	parn	74	72.145	Esox_lucius
ENSCAFG00000018795	PARN	100	96.082	ENSFCAG00000044961	PARN	100	96.082	Felis_catus
ENSCAFG00000018795	PARN	58	30.570	ENSFALG00000012081	PNLDC1	70	30.570	Ficedula_albicollis
ENSCAFG00000018795	PARN	99	82.092	ENSFALG00000003911	PARN	98	82.092	Ficedula_albicollis
ENSCAFG00000018795	PARN	100	89.185	ENSFDAG00000009234	PARN	100	89.185	Fukomys_damarensis
ENSCAFG00000018795	PARN	92	65.275	ENSFHEG00000013738	parn	92	76.271	Fundulus_heteroclitus
ENSCAFG00000018795	PARN	83	75.933	ENSGMOG00000003231	parn	97	75.933	Gadus_morhua
ENSCAFG00000018795	PARN	100	81.123	ENSGALG00000003091	PARN	100	81.123	Gallus_gallus
ENSCAFG00000018795	PARN	90	72.184	ENSGAFG00000011061	parn	84	71.309	Gambusia_affinis
ENSCAFG00000018795	PARN	100	67.391	ENSGACG00000019501	parn	100	67.391	Gasterosteus_aculeatus
ENSCAFG00000018795	PARN	51	79.027	ENSGAGG00000023281	PARN	83	79.268	Gopherus_agassizii
ENSCAFG00000018795	PARN	97	93.237	ENSGGOG00000025224	PARN	100	94.915	Gorilla_gorilla
ENSCAFG00000018795	PARN	90	74.266	ENSHBUG00000017906	parn	90	76.536	Haplochromis_burtoni
ENSCAFG00000018795	PARN	100	88.871	ENSHGLG00000010886	PARN	100	88.871	Heterocephalus_glaber_female
ENSCAFG00000018795	PARN	100	88.871	ENSHGLG00100014659	PARN	100	88.871	Heterocephalus_glaber_male
ENSCAFG00000018795	PARN	82	72.779	ENSHCOG00000008683	parn	91	72.779	Hippocampus_comes
ENSCAFG00000018795	PARN	100	55.704	ENSIPUG00000012401	parn	84	61.831	Ictalurus_punctatus
ENSCAFG00000018795	PARN	100	91.536	ENSSTOG00000007519	PARN	100	91.536	Ictidomys_tridecemlineatus
ENSCAFG00000018795	PARN	100	88.245	ENSJJAG00000023049	Parn	100	88.245	Jaculus_jaculus
ENSCAFG00000018795	PARN	83	77.799	ENSKMAG00000009462	parn	79	77.799	Kryptolebias_marmoratus
ENSCAFG00000018795	PARN	92	71.164	ENSLBEG00000009167	parn	90	71.164	Labrus_bergylta
ENSCAFG00000018795	PARN	79	78.175	ENSLACG00000004207	PARN	100	76.651	Latimeria_chalumnae
ENSCAFG00000018795	PARN	92	73.980	ENSLOCG00000000715	parn	85	73.980	Lepisosteus_oculatus
ENSCAFG00000018795	PARN	100	92.163	ENSLAFG00000015036	PARN	100	92.163	Loxodonta_africana
ENSCAFG00000018795	PARN	100	88.125	ENSMFAG00000044852	PARN	100	94.915	Macaca_fascicularis
ENSCAFG00000018795	PARN	100	92.801	ENSMMUG00000018849	PARN	100	94.915	Macaca_mulatta
ENSCAFG00000018795	PARN	100	92.958	ENSMNEG00000045108	PARN	100	94.915	Macaca_nemestrina
ENSCAFG00000018795	PARN	100	92.801	ENSMLEG00000031743	PARN	100	94.915	Mandrillus_leucophaeus
ENSCAFG00000018795	PARN	92	71.644	ENSMAMG00000006939	parn	84	71.644	Mastacembelus_armatus
ENSCAFG00000018795	PARN	90	74.266	ENSMZEG00005013590	parn	98	72.213	Maylandia_zebra
ENSCAFG00000018795	PARN	95	81.086	ENSMGAG00000001004	PARN	95	81.086	Meleagris_gallopavo
ENSCAFG00000018795	PARN	52	35.616	ENSMAUG00000012298	Pnldc1	68	35.616	Mesocricetus_auratus
ENSCAFG00000018795	PARN	100	78.428	ENSMAUG00000008025	Parn	100	78.428	Mesocricetus_auratus
ENSCAFG00000018795	PARN	100	94.201	ENSMICG00000016053	PARN	100	96.610	Microcebus_murinus
ENSCAFG00000018795	PARN	77	90.081	ENSMOCG00000022211	Parn	100	90.081	Microtus_ochrogaster
ENSCAFG00000018795	PARN	83	75.701	ENSMMOG00000011333	parn	87	75.701	Mola_mola
ENSCAFG00000018795	PARN	77	92.944	ENSMODG00000004915	PARN	99	92.944	Monodelphis_domestica
ENSCAFG00000018795	PARN	83	78.026	ENSMALG00000019426	parn	91	78.026	Monopterus_albus
ENSCAFG00000018795	PARN	100	84.953	MGP_CAROLIEiJ_G0020466	Parn	100	84.953	Mus_caroli
ENSCAFG00000018795	PARN	51	30.931	ENSMUSG00000073460	Pnldc1	97	30.931	Mus_musculus
ENSCAFG00000018795	PARN	100	84.796	ENSMUSG00000022685	Parn	100	91.463	Mus_musculus
ENSCAFG00000018795	PARN	100	84.953	MGP_PahariEiJ_G0016172	Parn	100	84.953	Mus_pahari
ENSCAFG00000018795	PARN	100	84.796	MGP_SPRETEiJ_G0021361	Parn	100	84.796	Mus_spretus
ENSCAFG00000018795	PARN	100	96.395	ENSMPUG00000014464	PARN	100	96.395	Mustela_putorius_furo
ENSCAFG00000018795	PARN	77	93.927	ENSMLUG00000005414	PARN	100	93.927	Myotis_lucifugus
ENSCAFG00000018795	PARN	90	71.503	ENSNBRG00000006805	parn	90	76.030	Neolamprologus_brichardi
ENSCAFG00000018795	PARN	100	92.801	ENSNLEG00000010241	PARN	100	94.915	Nomascus_leucogenys
ENSCAFG00000018795	PARN	99	61.014	ENSMEUG00000008178	-	100	61.014	Notamacropus_eugenii
ENSCAFG00000018795	PARN	99	85.261	ENSOPRG00000012187	PARN	100	85.261	Ochotona_princeps
ENSCAFG00000018795	PARN	100	80.967	ENSODEG00000001617	PARN	100	80.967	Octodon_degus
ENSCAFG00000018795	PARN	100	68.182	ENSONIG00000000151	parn	100	69.029	Oreochromis_niloticus
ENSCAFG00000018795	PARN	60	81.818	ENSOANG00000020155	-	97	82.895	Ornithorhynchus_anatinus
ENSCAFG00000018795	PARN	99	90.236	ENSOCUG00000000322	PARN	100	90.236	Oryctolagus_cuniculus
ENSCAFG00000018795	PARN	90	72.712	ENSORLG00020010313	parn	96	67.130	Oryzias_latipes_hni
ENSCAFG00000018795	PARN	90	72.539	ENSORLG00015000300	parn	96	66.975	Oryzias_latipes_hsok
ENSCAFG00000018795	PARN	99	66.364	ENSOMEG00000019555	parn	97	66.063	Oryzias_melastigma
ENSCAFG00000018795	PARN	77	92.525	ENSOGAG00000014626	PARN	100	92.525	Otolemur_garnettii
ENSCAFG00000018795	PARN	77	97.166	ENSOARG00000007574	PARN	100	97.166	Ovis_aries
ENSCAFG00000018795	PARN	100	92.645	ENSPPAG00000031438	PARN	100	94.915	Pan_paniscus
ENSCAFG00000018795	PARN	100	95.925	ENSPPRG00000018583	PARN	100	95.925	Panthera_pardus
ENSCAFG00000018795	PARN	100	95.925	ENSPTIG00000012135	PARN	100	95.925	Panthera_tigris_altaica
ENSCAFG00000018795	PARN	100	92.645	ENSPTRG00000007792	PARN	100	94.915	Pan_troglodytes
ENSCAFG00000018795	PARN	100	89.828	ENSPANG00000020099	PARN	100	94.915	Papio_anubis
ENSCAFG00000018795	PARN	99	64.899	ENSPKIG00000022807	parn	99	64.899	Paramormyrops_kingsleyae
ENSCAFG00000018795	PARN	97	83.520	ENSPSIG00000014804	PARN	100	82.241	Pelodiscus_sinensis
ENSCAFG00000018795	PARN	80	76.265	ENSPMGG00000014431	parn	77	72.924	Periophthalmus_magnuspinnatus
ENSCAFG00000018795	PARN	100	82.915	ENSPEMG00000018439	Parn	100	82.915	Peromyscus_maniculatus_bairdii
ENSCAFG00000018795	PARN	81	66.923	ENSPMAG00000003956	parn	99	66.923	Petromyzon_marinus
ENSCAFG00000018795	PARN	66	85.343	ENSPCIG00000001259	PARN	91	89.831	Phascolarctos_cinereus
ENSCAFG00000018795	PARN	83	76.866	ENSPFOG00000012823	parn	78	76.866	Poecilia_formosa
ENSCAFG00000018795	PARN	83	77.052	ENSPLAG00000006395	parn	78	77.052	Poecilia_latipinna
ENSCAFG00000018795	PARN	83	77.052	ENSPMEG00000007711	parn	84	71.380	Poecilia_mexicana
ENSCAFG00000018795	PARN	83	76.679	ENSPREG00000000147	parn	84	71.044	Poecilia_reticulata
ENSCAFG00000018795	PARN	100	92.356	ENSPPYG00000007123	PARN	100	92.356	Pongo_abelii
ENSCAFG00000018795	PARN	95	82.479	ENSPCAG00000001741	PARN	100	82.479	Procavia_capensis
ENSCAFG00000018795	PARN	100	91.850	ENSPCOG00000019292	PARN	100	96.610	Propithecus_coquereli
ENSCAFG00000018795	PARN	99	90.174	ENSPVAG00000002547	PARN	100	90.174	Pteropus_vampyrus
ENSCAFG00000018795	PARN	98	69.767	ENSPNYG00000006835	parn	98	69.521	Pundamilia_nyererei
ENSCAFG00000018795	PARN	82	73.764	ENSPNAG00000018905	parn	84	73.764	Pygocentrus_nattereri
ENSCAFG00000018795	PARN	51	30.120	ENSRNOG00000023140	Pnldc1	89	30.120	Rattus_norvegicus
ENSCAFG00000018795	PARN	100	82.317	ENSRNOG00000002912	Parn	98	85.859	Rattus_norvegicus
ENSCAFG00000018795	PARN	52	89.790	ENSRBIG00000018726	PARN	100	89.790	Rhinopithecus_bieti
ENSCAFG00000018795	PARN	52	89.790	ENSRROG00000011162	-	100	89.790	Rhinopithecus_roxellana
ENSCAFG00000018795	PARN	100	90.923	ENSSBOG00000034726	PARN	100	94.915	Saimiri_boliviensis_boliviensis
ENSCAFG00000018795	PARN	66	92.344	ENSSHAG00000008493	PARN	94	92.344	Sarcophilus_harrisii
ENSCAFG00000018795	PARN	96	71.057	ENSSFOG00015014165	parn	96	71.141	Scleropages_formosus
ENSCAFG00000018795	PARN	83	75.560	ENSSMAG00000000685	parn	100	62.404	Scophthalmus_maximus
ENSCAFG00000018795	PARN	86	75.271	ENSSDUG00000014555	parn	80	75.271	Seriola_dumerili
ENSCAFG00000018795	PARN	91	80.829	ENSSARG00000014339	PARN	100	80.829	Sorex_araneus
ENSCAFG00000018795	PARN	100	83.699	ENSSPUG00000007719	PARN	100	83.699	Sphenodon_punctatus
ENSCAFG00000018795	PARN	91	73.514	ENSSPAG00000007095	parn	86	73.970	Stegastes_partitus
ENSCAFG00000018795	PARN	100	93.574	ENSSSCG00000007878	PARN	89	93.574	Sus_scrofa
ENSCAFG00000018795	PARN	99	82.306	ENSTGUG00000004971	PARN	99	82.306	Taeniopygia_guttata
ENSCAFG00000018795	PARN	55	30.278	ENSTGUG00000011418	PNLDC1	68	30.278	Taeniopygia_guttata
ENSCAFG00000018795	PARN	100	67.957	ENSTNIG00000008252	parn	100	68.111	Tetraodon_nigroviridis
ENSCAFG00000018795	PARN	91	78.756	ENSTBEG00000010407	PARN	100	78.756	Tupaia_belangeri
ENSCAFG00000018795	PARN	99	89.699	ENSTTRG00000002843	PARN	100	89.699	Tursiops_truncatus
ENSCAFG00000018795	PARN	68	84.633	ENSUAMG00000008283	PARN	90	84.633	Ursus_americanus
ENSCAFG00000018795	PARN	100	97.022	ENSUMAG00000004527	PARN	100	97.022	Ursus_maritimus
ENSCAFG00000018795	PARN	96	90.717	ENSVPAG00000008968	PARN	100	90.717	Vicugna_pacos
ENSCAFG00000018795	PARN	100	99.216	ENSVVUG00000019509	PARN	100	99.216	Vulpes_vulpes
ENSCAFG00000018795	PARN	100	73.438	ENSXETG00000010994	parn	100	82.129	Xenopus_tropicalis
ENSCAFG00000018795	PARN	90	68.664	ENSXCOG00000015990	parn	96	67.513	Xiphophorus_couchianus
ENSCAFG00000018795	PARN	92	71.549	ENSXMAG00000014783	parn	84	71.549	Xiphophorus_maculatus