EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAFG00000018814 (Gene tree)
Gene ID: 476740
Gene Symbol: SAFB2
Alias: -
Full Name: scaffold attachment factor B2
Gene Type: protein_coding
Species: Canis_familiaris
Status: putative
Strand: Plus strand
Length: 33427 bases
Position: chr20:54381432-54414858
Accession: 45845
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00000027756	RRM_1	PF00076.22	1.2e-13	1	1
ENSCAFP00000035969	RRM_1	PF00076.22	1.3e-13	1	1
ENSCAFP00000027756	SAP	PF02037.27	1.2e-10	1	1
ENSCAFP00000035969	SAP	PF02037.27	1.2e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00000029866	-	2859	-	ENSCAFP00000027756	953 (aa)	-	F1PPN1
ENSCAFT00000045160	-	3601	XM_533945	ENSCAFP00000035969	954 (aa)	XP_013977444	J9JHN8

Gene Model

Click here to download ENSCAFG00000018814's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00000018814's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAFG00000018814	SAFB2	94	71.222	ENSCAFG00000018803	SAFB	87	66.735

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00000018814	SAFB2	100	88.796	ENSG00000130254	SAFB2	100	88.796	Homo_sapiens
ENSCAFG00000018814	SAFB2	100	94.561	ENSAMEG00000012146	SAFB2	100	94.561	Ailuropoda_melanoleuca
ENSCAFG00000018814	SAFB2	100	89.110	ENSANAG00000031936	SAFB2	100	89.110	Aotus_nancymaae
ENSCAFG00000018814	SAFB2	100	88.994	ENSBTAG00000001790	SAFB2	99	89.530	Bos_taurus
ENSCAFG00000018814	SAFB2	100	100.000	ENSCAFG00020018939	SAFB2	100	100.000	Canis_lupus_dingo
ENSCAFG00000018814	SAFB2	100	88.050	ENSCHIG00000024547	SAFB2	100	88.050	Capra_hircus
ENSCAFG00000018814	SAFB2	93	67.210	ENSCAPG00000011771	SAFB2	100	68.013	Cavia_aperea
ENSCAFG00000018814	SAFB2	100	78.899	ENSCPOG00000011394	SAFB2	100	79.103	Cavia_porcellus
ENSCAFG00000018814	SAFB2	100	88.272	ENSCCAG00000017348	SAFB2	100	88.377	Cebus_capucinus
ENSCAFG00000018814	SAFB2	100	88.050	ENSCATG00000039497	SAFB2	100	88.050	Cercocebus_atys
ENSCAFG00000018814	SAFB2	100	88.796	ENSCSAG00000009959	SAFB2	100	88.796	Chlorocebus_sabaeus
ENSCAFG00000018814	SAFB2	74	78.279	ENSCHOG00000010684	SAFB2	100	78.420	Choloepus_hoffmanni
ENSCAFG00000018814	SAFB2	100	85.430	ENSCANG00000024675	SAFB2	100	84.953	Colobus_angolensis_palliatus
ENSCAFG00000018814	SAFB2	100	69.408	ENSCGRG00001015833	Safb2	100	69.208	Cricetulus_griseus_chok1gshd
ENSCAFG00000018814	SAFB2	100	69.408	ENSCGRG00000011131	Safb2	100	69.208	Cricetulus_griseus_crigri
ENSCAFG00000018814	SAFB2	95	76.139	ENSDORG00000016199	Safb2	100	76.247	Dipodomys_ordii
ENSCAFG00000018814	SAFB2	86	86.788	ENSEASG00005022952	SAFB2	91	86.342	Equus_asinus_asinus
ENSCAFG00000018814	SAFB2	98	87.086	ENSECAG00000018978	SAFB2	100	87.154	Equus_caballus
ENSCAFG00000018814	SAFB2	100	95.702	ENSFCAG00000011834	SAFB2	100	95.702	Felis_catus
ENSCAFG00000018814	SAFB2	93	81.833	ENSFDAG00000020009	SAFB2	91	82.097	Fukomys_damarensis
ENSCAFG00000018814	SAFB2	100	84.495	ENSGGOG00000015093	SAFB2	100	83.455	Gorilla_gorilla
ENSCAFG00000018814	SAFB2	100	85.318	ENSHGLG00000017442	SAFB2	100	85.421	Heterocephalus_glaber_female
ENSCAFG00000018814	SAFB2	98	84.000	ENSLAFG00000003836	SAFB2	99	83.140	Loxodonta_africana
ENSCAFG00000018814	SAFB2	100	88.901	ENSMFAG00000039706	SAFB2	100	88.901	Macaca_fascicularis
ENSCAFG00000018814	SAFB2	100	89.215	ENSMMUG00000017968	SAFB2	100	89.215	Macaca_mulatta
ENSCAFG00000018814	SAFB2	100	83.107	ENSMNEG00000032042	SAFB2	100	83.107	Macaca_nemestrina
ENSCAFG00000018814	SAFB2	100	89.110	ENSMLEG00000034562	SAFB2	100	89.110	Mandrillus_leucophaeus
ENSCAFG00000018814	SAFB2	82	73.345	ENSMAUG00000011573	Safb2	93	73.788	Mesocricetus_auratus
ENSCAFG00000018814	SAFB2	100	87.552	ENSMICG00000008711	SAFB2	100	87.552	Microcebus_murinus
ENSCAFG00000018814	SAFB2	100	69.084	ENSMOCG00000006827	Safb2	100	68.983	Microtus_ochrogaster
ENSCAFG00000018814	SAFB2	98	72.967	ENSMODG00000001178	SAFB2	100	72.332	Monodelphis_domestica
ENSCAFG00000018814	SAFB2	99	70.110	MGP_CAROLIEiJ_G0021779	Safb2	99	69.910	Mus_caroli
ENSCAFG00000018814	SAFB2	99	70.382	ENSMUSG00000042625	Safb2	99	70.181	Mus_musculus
ENSCAFG00000018814	SAFB2	99	69.828	MGP_PahariEiJ_G0020768	Safb2	100	68.232	Mus_pahari
ENSCAFG00000018814	SAFB2	99	65.016	MGP_SPRETEiJ_G0022690	Safb2	99	63.309	Mus_spretus
ENSCAFG00000018814	SAFB2	100	95.912	ENSMPUG00000006106	SAFB2	93	95.912	Mustela_putorius_furo
ENSCAFG00000018814	SAFB2	100	87.461	ENSMLUG00000001050	SAFB2	100	85.699	Myotis_lucifugus
ENSCAFG00000018814	SAFB2	100	87.945	ENSNLEG00000013514	SAFB2	100	87.945	Nomascus_leucogenys
ENSCAFG00000018814	SAFB2	94	69.463	ENSMEUG00000002456	SAFB2	100	69.016	Notamacropus_eugenii
ENSCAFG00000018814	SAFB2	100	74.167	ENSOPRG00000011523	-	100	74.375	Ochotona_princeps
ENSCAFG00000018814	SAFB2	100	81.036	ENSODEG00000014751	SAFB2	100	81.036	Octodon_degus
ENSCAFG00000018814	SAFB2	100	86.925	ENSOGAG00000006855	SAFB2	100	86.820	Otolemur_garnettii
ENSCAFG00000018814	SAFB2	97	78.756	ENSOARG00000007982	SAFB2	67	89.677	Ovis_aries
ENSCAFG00000018814	SAFB2	100	88.901	ENSPPAG00000043392	SAFB2	100	88.901	Pan_paniscus
ENSCAFG00000018814	SAFB2	100	95.493	ENSPPRG00000011310	SAFB2	100	95.493	Panthera_pardus
ENSCAFG00000018814	SAFB2	93	79.890	ENSPTIG00000015120	SAFB2	66	88.538	Panthera_tigris_altaica
ENSCAFG00000018814	SAFB2	100	83.037	ENSPTRG00000010334	SAFB2	100	82.932	Pan_troglodytes
ENSCAFG00000018814	SAFB2	100	89.005	ENSPANG00000007004	SAFB2	100	89.005	Papio_anubis
ENSCAFG00000018814	SAFB2	100	67.264	ENSPEMG00000016015	Safb2	100	67.065	Peromyscus_maniculatus_bairdii
ENSCAFG00000018814	SAFB2	64	75.777	ENSPCIG00000009518	-	99	78.782	Phascolarctos_cinereus
ENSCAFG00000018814	SAFB2	100	88.901	ENSPPYG00000009427	SAFB2	100	88.901	Pongo_abelii
ENSCAFG00000018814	SAFB2	100	81.146	ENSPCAG00000006352	SAFB2	99	82.715	Procavia_capensis
ENSCAFG00000018814	SAFB2	100	84.382	ENSPCOG00000023260	SAFB2	100	82.845	Propithecus_coquereli
ENSCAFG00000018814	SAFB2	58	91.304	ENSPVAG00000004902	-	74	91.304	Pteropus_vampyrus
ENSCAFG00000018814	SAFB2	82	69.333	ENSRNOG00000049511	AABR07066522.1	100	68.485	Rattus_norvegicus
ENSCAFG00000018814	SAFB2	83	92.845	ENSRBIG00000033446	SAFB2	99	93.007	Rhinopithecus_bieti
ENSCAFG00000018814	SAFB2	100	89.319	ENSRROG00000006606	SAFB2	100	89.319	Rhinopithecus_roxellana
ENSCAFG00000018814	SAFB2	100	87.317	ENSSBOG00000032315	SAFB2	100	87.942	Saimiri_boliviensis_boliviensis
ENSCAFG00000018814	SAFB2	97	73.168	ENSSHAG00000012703	SAFB2	100	71.294	Sarcophilus_harrisii
ENSCAFG00000018814	SAFB2	81	75.226	ENSSARG00000000649	SAFB2	100	76.129	Sorex_araneus
ENSCAFG00000018814	SAFB2	100	93.822	ENSSSCG00000013523	SAFB2	100	93.403	Sus_scrofa
ENSCAFG00000018814	SAFB2	77	78.639	ENSTBEG00000012709	SAFB2	85	78.639	Tupaia_belangeri
ENSCAFG00000018814	SAFB2	94	85.202	ENSTTRG00000013585	SAFB2	93	84.641	Tursiops_truncatus
ENSCAFG00000018814	SAFB2	99	97.371	ENSUAMG00000024695	SAFB2	99	97.371	Ursus_americanus
ENSCAFG00000018814	SAFB2	84	97.423	ENSUMAG00000009585	SAFB2	92	93.366	Ursus_maritimus
ENSCAFG00000018814	SAFB2	74	96.335	ENSVPAG00000012041	SAFB2	88	96.721	Vicugna_pacos
ENSCAFG00000018814	SAFB2	100	99.686	ENSVVUG00000013695	SAFB2	100	99.686	Vulpes_vulpes