EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCAFG00000018928 (Gene tree)
Gene ID: 480218
Gene Symbol: MBD1
Alias: -
Full Name: methyl-CpG binding domain protein 1
Gene Type: protein_coding
Species: Canis_familiaris
Status: putative
Strand: Plus strand
Length: 11425 bases
Position: chr7:78598014-78609438
Accession: 43049
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00000027926	MBD	PF01429.19	2.7e-16	1	1
ENSCAFP00000027924	MBD	PF01429.19	2.9e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00000030047	-	2181	XM_005623106	ENSCAFP00000027924	726 (aa)	XP_005623163	E2R214
ENSCAFT00000030049	-	1974	XM_005623115	ENSCAFP00000027926	657 (aa)	XP_005623178	E2R211

Gene Model

Click here to download ENSCAFG00000018928's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00000018928's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00000018928	MBD1	96	87.797	ENSG00000141644	MBD1	99	95.420	Homo_sapiens
ENSCAFG00000018928	MBD1	99	93.930	ENSAMEG00000000238	MBD1	99	93.930	Ailuropoda_melanoleuca
ENSCAFG00000018928	MBD1	62	44.686	ENSACAG00000006091	-	85	63.768	Anolis_carolinensis
ENSCAFG00000018928	MBD1	96	86.688	ENSANAG00000036253	MBD1	100	85.895	Aotus_nancymaae
ENSCAFG00000018928	MBD1	96	88.766	ENSBTAG00000003801	MBD1	100	88.133	Bos_taurus
ENSCAFG00000018928	MBD1	96	85.226	ENSCJAG00000004959	MBD1	100	84.448	Callithrix_jacchus
ENSCAFG00000018928	MBD1	95	99.358	ENSCAFG00020024272	MBD1	97	99.358	Canis_lupus_dingo
ENSCAFG00000018928	MBD1	96	88.449	ENSCHIG00000021134	MBD1	100	87.975	Capra_hircus
ENSCAFG00000018928	MBD1	96	86.688	ENSTSYG00000000509	MBD1	100	85.895	Carlito_syrichta
ENSCAFG00000018928	MBD1	95	60.800	ENSCAPG00000015782	MBD1	98	69.434	Cavia_aperea
ENSCAFG00000018928	MBD1	98	67.391	ENSCPOG00000001671	MBD1	99	70.614	Cavia_porcellus
ENSCAFG00000018928	MBD1	97	80.769	ENSCCAG00000034600	MBD1	100	74.960	Cebus_capucinus
ENSCAFG00000018928	MBD1	96	87.797	ENSCATG00000029959	MBD1	100	87.005	Cercocebus_atys
ENSCAFG00000018928	MBD1	97	83.856	ENSCLAG00000007457	MBD1	90	83.229	Chinchilla_lanigera
ENSCAFG00000018928	MBD1	96	84.152	ENSCSAG00000018070	MBD1	100	83.360	Chlorocebus_sabaeus
ENSCAFG00000018928	MBD1	96	87.797	ENSCANG00000033425	MBD1	100	87.005	Colobus_angolensis_palliatus
ENSCAFG00000018928	MBD1	96	70.236	ENSCGRG00001014843	Mbd1	98	79.545	Cricetulus_griseus_chok1gshd
ENSCAFG00000018928	MBD1	95	51.030	ENSCGRG00000014135	Mbd1	96	54.808	Cricetulus_griseus_crigri
ENSCAFG00000018928	MBD1	96	80.983	ENSDNOG00000015998	MBD1	100	82.092	Dasypus_novemcinctus
ENSCAFG00000018928	MBD1	87	72.443	ENSDORG00000013917	Mbd1	98	81.439	Dipodomys_ordii
ENSCAFG00000018928	MBD1	96	90.981	ENSEASG00005003857	MBD1	100	92.803	Equus_asinus_asinus
ENSCAFG00000018928	MBD1	96	90.174	ENSECAG00000011497	MBD1	80	90.333	Equus_caballus
ENSCAFG00000018928	MBD1	65	32.727	ENSELUG00000004375	mbd1b	51	31.169	Esox_lucius
ENSCAFG00000018928	MBD1	96	95.253	ENSFCAG00000015730	MBD1	100	95.253	Felis_catus
ENSCAFG00000018928	MBD1	95	70.288	ENSFDAG00000011085	MBD1	96	69.649	Fukomys_damarensis
ENSCAFG00000018928	MBD1	96	87.797	ENSGGOG00000016966	MBD1	100	87.005	Gorilla_gorilla
ENSCAFG00000018928	MBD1	96	83.994	ENSHGLG00000008740	MBD1	100	83.360	Heterocephalus_glaber_female
ENSCAFG00000018928	MBD1	89	87.261	ENSHGLG00100005198	MBD1	100	87.742	Heterocephalus_glaber_male
ENSCAFG00000018928	MBD1	96	78.003	ENSSTOG00000007780	MBD1	100	77.379	Ictidomys_tridecemlineatus
ENSCAFG00000018928	MBD1	94	64.309	ENSJJAG00000022859	Mbd1	96	83.270	Jaculus_jaculus
ENSCAFG00000018928	MBD1	63	39.141	ENSLACG00000002414	-	52	62.500	Latimeria_chalumnae
ENSCAFG00000018928	MBD1	95	72.771	ENSLAFG00000031328	MBD1	98	76.093	Loxodonta_africana
ENSCAFG00000018928	MBD1	96	87.322	ENSMFAG00000026335	MBD1	100	86.529	Macaca_fascicularis
ENSCAFG00000018928	MBD1	96	87.322	ENSMMUG00000009050	MBD1	100	91.667	Macaca_mulatta
ENSCAFG00000018928	MBD1	96	87.322	ENSMNEG00000038822	MBD1	100	86.529	Macaca_nemestrina
ENSCAFG00000018928	MBD1	96	87.639	ENSMLEG00000043121	MBD1	100	86.846	Mandrillus_leucophaeus
ENSCAFG00000018928	MBD1	96	85.443	ENSMICG00000006414	MBD1	100	85.443	Microcebus_murinus
ENSCAFG00000018928	MBD1	54	48.000	ENSMODG00000001286	-	50	75.410	Monodelphis_domestica
ENSCAFG00000018928	MBD1	95	64.220	ENSMUSG00000024561	Mbd1	98	71.626	Mus_musculus
ENSCAFG00000018928	MBD1	96	64.580	MGP_PahariEiJ_G0019128	Mbd1	100	64.885	Mus_pahari
ENSCAFG00000018928	MBD1	94	65.576	MGP_SPRETEiJ_G0023304	Mbd1	99	64.953	Mus_spretus
ENSCAFG00000018928	MBD1	99	93.303	ENSMPUG00000008843	MBD1	99	93.303	Mustela_putorius_furo
ENSCAFG00000018928	MBD1	99	88.000	ENSMLUG00000008286	MBD1	99	87.231	Myotis_lucifugus
ENSCAFG00000018928	MBD1	94	63.766	ENSNGAG00000011412	Mbd1	98	77.817	Nannospalax_galili
ENSCAFG00000018928	MBD1	94	66.667	ENSNLEG00000032711	-	99	66.667	Nomascus_leucogenys
ENSCAFG00000018928	MBD1	96	86.688	ENSNLEG00000011661	-	100	85.895	Nomascus_leucogenys
ENSCAFG00000018928	MBD1	96	70.365	ENSOPRG00000007647	MBD1	100	70.365	Ochotona_princeps
ENSCAFG00000018928	MBD1	81	86.486	ENSODEG00000018451	MBD1	98	86.742	Octodon_degus
ENSCAFG00000018928	MBD1	82	44.602	ENSOANG00000014593	-	87	56.364	Ornithorhynchus_anatinus
ENSCAFG00000018928	MBD1	96	83.360	ENSOCUG00000006554	MBD1	100	83.360	Oryctolagus_cuniculus
ENSCAFG00000018928	MBD1	99	83.258	ENSOGAG00000003784	MBD1	99	82.504	Otolemur_garnettii
ENSCAFG00000018928	MBD1	96	88.208	ENSOARG00000004218	MBD1	95	87.736	Ovis_aries
ENSCAFG00000018928	MBD1	96	84.152	ENSPPAG00000038886	MBD1	100	83.360	Pan_paniscus
ENSCAFG00000018928	MBD1	96	95.411	ENSPPRG00000021387	MBD1	100	95.411	Panthera_pardus
ENSCAFG00000018928	MBD1	96	95.253	ENSPTIG00000021231	MBD1	100	95.253	Panthera_tigris_altaica
ENSCAFG00000018928	MBD1	96	87.639	ENSPTRG00000010021	MBD1	100	86.846	Pan_troglodytes
ENSCAFG00000018928	MBD1	96	87.480	ENSPANG00000010867	MBD1	100	86.688	Papio_anubis
ENSCAFG00000018928	MBD1	95	57.387	ENSPEMG00000022630	Mbd1	98	68.440	Peromyscus_maniculatus_bairdii
ENSCAFG00000018928	MBD1	93	46.508	ENSPCIG00000027937	-	71	59.245	Phascolarctos_cinereus
ENSCAFG00000018928	MBD1	96	83.912	ENSPPYG00000009158	MBD1	92	83.125	Pongo_abelii
ENSCAFG00000018928	MBD1	96	72.222	ENSPCAG00000001648	MBD1	93	87.500	Procavia_capensis
ENSCAFG00000018928	MBD1	96	84.945	ENSPCOG00000012450	MBD1	100	85.333	Propithecus_coquereli
ENSCAFG00000018928	MBD1	76	67.220	ENSRNOG00000024104	Mbd1	89	67.339	Rattus_norvegicus
ENSCAFG00000018928	MBD1	96	80.824	ENSRBIG00000041294	MBD1	100	80.032	Rhinopithecus_bieti
ENSCAFG00000018928	MBD1	96	87.163	ENSRROG00000032517	MBD1	100	86.371	Rhinopithecus_roxellana
ENSCAFG00000018928	MBD1	97	84.923	ENSSBOG00000027169	MBD1	100	80.916	Saimiri_boliviensis_boliviensis
ENSCAFG00000018928	MBD1	73	48.302	ENSSHAG00000003661	-	100	46.154	Sarcophilus_harrisii
ENSCAFG00000018928	MBD1	95	86.838	ENSSSCG00000004516	MBD1	100	83.677	Sus_scrofa
ENSCAFG00000018928	MBD1	63	78.750	ENSTBEG00000012651	-	68	78.750	Tupaia_belangeri
ENSCAFG00000018928	MBD1	96	83.861	ENSTTRG00000015523	MBD1	98	94.318	Tursiops_truncatus
ENSCAFG00000018928	MBD1	95	89.246	ENSUAMG00000004752	MBD1	97	89.280	Ursus_americanus
ENSCAFG00000018928	MBD1	96	94.118	ENSUMAG00000002947	MBD1	100	91.297	Ursus_maritimus