EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCAFG00000018939 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Canis_familiaris
Status: putative
Strand: Plus strand
Length: 60448 bases
Position: chr4:75832063-75892510
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00000027962	Ribonuclease_3	PF00636.26	1.4e-43	1	2
ENSCAFP00000027962	Ribonuclease_3	PF00636.26	1.4e-43	2	2
ENSCAFP00000027962	dsrm	PF00035.26	4.8e-15	1	1
ENSCAFP00000027962	Ribonucleas_3_3	PF14622.6	7.4e-45	1	2
ENSCAFP00000027962	Ribonucleas_3_3	PF14622.6	7.4e-45	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00000030086	-	1881	-	ENSCAFP00000027962	627 (aa)	-	F1PJL5

Gene Model

Click here to download ENSCAFG00000018939's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00000018939's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00000018939	-	65	93.171	ENSAPOG00000002761	-	69	93.171	Acanthochromis_polyacanthus
ENSCAFG00000018939	-	96	96.186	ENSACIG00000019308	drosha	62	94.896	Amphilophus_citrinellus
ENSCAFG00000018939	-	100	94.418	ENSANAG00000020506	DROSHA	61	94.418	Aotus_nancymaae
ENSCAFG00000018939	-	94	39.832	WBGene00009163	drsh-1	53	39.832	Caenorhabditis_elegans
ENSCAFG00000018939	-	100	100.000	ENSCAFG00020017559	DROSHA	88	100.000	Canis_lupus_dingo
ENSCAFG00000018939	-	86	96.118	ENSCAPG00000015787	-	100	96.118	Cavia_aperea
ENSCAFG00000018939	-	100	99.681	ENSCCAG00000027283	DROSHA	61	99.681	Cebus_capucinus
ENSCAFG00000018939	-	100	99.841	ENSCATG00000016833	DROSHA	61	97.608	Cercocebus_atys
ENSCAFG00000018939	-	78	62.559	ENSCING00000001525	-	94	62.559	Ciona_intestinalis
ENSCAFG00000018939	-	96	61.601	ENSCSAVG00000010638	-	73	61.601	Ciona_savignyi
ENSCAFG00000018939	-	100	99.841	ENSCANG00000035071	DROSHA	62	97.608	Colobus_angolensis_palliatus
ENSCAFG00000018939	-	98	83.524	ENSEBUG00000005974	-	90	83.524	Eptatretus_burgeri
ENSCAFG00000018939	-	100	99.841	ENSGGOG00000011006	DROSHA	61	97.767	Gorilla_gorilla
ENSCAFG00000018939	-	99	95.177	ENSHCOG00000008454	drosha	52	95.177	Hippocampus_comes
ENSCAFG00000018939	-	100	99.841	ENSSTOG00000016323	DROSHA	100	99.815	Ictidomys_tridecemlineatus
ENSCAFG00000018939	-	100	99.681	ENSLAFG00000013831	DROSHA	51	99.681	Loxodonta_africana
ENSCAFG00000018939	-	100	99.681	ENSMMUG00000012193	DROSHA	61	99.681	Macaca_mulatta
ENSCAFG00000018939	-	100	95.853	ENSMAMG00000012613	drosha	62	95.853	Mastacembelus_armatus
ENSCAFG00000018939	-	100	95.419	ENSMICG00000002241	DROSHA	61	95.419	Microcebus_murinus
ENSCAFG00000018939	-	100	88.517	ENSMMOG00000004016	drosha	60	88.517	Mola_mola
ENSCAFG00000018939	-	100	99.362	MGP_CAROLIEiJ_G0019687	Drosha	62	99.362	Mus_caroli
ENSCAFG00000018939	-	100	99.362	MGP_PahariEiJ_G0016063	Drosha	62	99.362	Mus_pahari
ENSCAFG00000018939	-	100	99.362	MGP_SPRETEiJ_G0020580	Drosha	62	99.362	Mus_spretus
ENSCAFG00000018939	-	96	86.855	ENSNBRG00000001870	drosha	64	85.920	Neolamprologus_brichardi
ENSCAFG00000018939	-	100	99.681	ENSNLEG00000013963	DROSHA	61	97.448	Nomascus_leucogenys
ENSCAFG00000018939	-	100	77.708	ENSOANG00000015744	-	81	77.708	Ornithorhynchus_anatinus
ENSCAFG00000018939	-	100	92.663	ENSORLG00020002854	drosha	61	92.663	Oryzias_latipes_hni
ENSCAFG00000018939	-	100	94.737	ENSORLG00015003156	drosha	61	94.737	Oryzias_latipes_hsok
ENSCAFG00000018939	-	100	99.681	ENSOGAG00000005424	DROSHA	51	99.681	Otolemur_garnettii
ENSCAFG00000018939	-	100	99.841	ENSPPAG00000037526	DROSHA	61	95.534	Pan_paniscus
ENSCAFG00000018939	-	68	93.953	ENSPMGG00000016027	drosha	88	93.953	Periophthalmus_magnuspinnatus
ENSCAFG00000018939	-	100	97.289	ENSPCOG00000028511	DROSHA	61	97.289	Propithecus_coquereli
ENSCAFG00000018939	-	96	95.854	ENSPNYG00000000398	drosha	61	92.235	Pundamilia_nyererei
ENSCAFG00000018939	-	100	95.215	ENSPNAG00000011876	drosha	52	95.215	Pygocentrus_nattereri
ENSCAFG00000018939	-	100	99.363	ENSRBIG00000032786	DROSHA	62	95.534	Rhinopithecus_bieti
ENSCAFG00000018939	-	100	99.681	ENSSBOG00000024008	DROSHA	61	96.970	Saimiri_boliviensis_boliviensis
ENSCAFG00000018939	-	99	98.884	ENSSHAG00000015198	DROSHA	60	98.884	Sarcophilus_harrisii
ENSCAFG00000018939	-	100	92.663	ENSSFOG00015009776	drosha	50	92.663	Scleropages_formosus
ENSCAFG00000018939	-	100	95.694	ENSSDUG00000010944	drosha	61	95.694	Seriola_dumerili
ENSCAFG00000018939	-	100	95.534	ENSSLDG00000025271	drosha	61	95.534	Seriola_lalandi_dorsalis
ENSCAFG00000018939	-	100	94.453	ENSTNIG00000008688	drosha	61	94.453	Tetraodon_nigroviridis
ENSCAFG00000018939	-	100	99.841	ENSUMAG00000014097	DROSHA	87	99.841	Ursus_maritimus
ENSCAFG00000018939	-	100	94.258	ENSVPAG00000011260	DROSHA	57	94.258	Vicugna_pacos
ENSCAFG00000018939	-	100	100.000	ENSVVUG00000022212	DROSHA	90	100.000	Vulpes_vulpes
ENSCAFG00000018939	-	70	83.073	ENSXCOG00000015325	drosha	96	82.030	Xiphophorus_couchianus