EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAFG00000018979 (Gene tree)
Gene ID: 492171
Gene Symbol: ZIC3
Alias: -
Full Name: Zic family member 3
Gene Type: protein_coding
Species: Canis_familiaris
Status: putative
Strand: Plus strand
Length: 11350 bases
Position: chrX:107822220-107833569
Accession: 48634
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00000028008	zf-C2H2	PF00096.26	1.6e-21	1	4
ENSCAFP00000028008	zf-C2H2	PF00096.26	1.6e-21	2	4
ENSCAFP00000028008	zf-C2H2	PF00096.26	1.6e-21	3	4
ENSCAFP00000028008	zf-C2H2	PF00096.26	1.6e-21	4	4
ENSCAFP00000042315	zf-C2H2	PF00096.26	9.8e-21	1	4
ENSCAFP00000042315	zf-C2H2	PF00096.26	9.8e-21	2	4
ENSCAFP00000042315	zf-C2H2	PF00096.26	9.8e-21	3	4
ENSCAFP00000042315	zf-C2H2	PF00096.26	9.8e-21	4	4
ENSCAFP00000042315	zf-met	PF12874.7	0.00037	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00000045147	-	2130	XM_014111986	ENSCAFP00000042315	456 (aa)	XP_013967461	J9P982
ENSCAFT00000030141	-	1398	XM_549291	ENSCAFP00000028008	466 (aa)	XP_549291	E2R969

Gene Model

Click here to download ENSCAFG00000018979's gene model file

Pathways

Pathway ID	Pathway Name	Source
cfa04550	Signaling pathways regulating pluripotency of stem cells	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00000018979's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAFG00000018979	ZIC3	58	40.909	ENSCAFG00000000017	ZNF236	50	40.909

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00000018979	ZIC3	100	98.073	ENSG00000156925	ZIC3	100	98.073	Homo_sapiens
ENSCAFG00000018979	ZIC3	100	98.501	ENSANAG00000019614	ZIC3	100	98.501	Aotus_nancymaae
ENSCAFG00000018979	ZIC3	100	98.073	ENSCJAG00000013792	ZIC3	100	98.073	Callithrix_jacchus
ENSCAFG00000018979	ZIC3	100	95.503	ENSTSYG00000003356	ZIC3	100	95.717	Carlito_syrichta
ENSCAFG00000018979	ZIC3	53	98.780	ENSCPOG00000002374	ZIC3	100	98.780	Cavia_porcellus
ENSCAFG00000018979	ZIC3	100	98.287	ENSCCAG00000025983	ZIC3	100	98.287	Cebus_capucinus
ENSCAFG00000018979	ZIC3	100	98.498	ENSCATG00000036569	ZIC3	100	98.498	Cercocebus_atys
ENSCAFG00000018979	ZIC3	100	98.501	ENSCLAG00000001934	ZIC3	100	98.501	Chinchilla_lanigera
ENSCAFG00000018979	ZIC3	93	87.586	ENSCPBG00000026115	ZIC3	100	87.586	Chrysemys_picta_bellii
ENSCAFG00000018979	ZIC3	100	98.712	ENSCANG00000017505	ZIC3	100	98.712	Colobus_angolensis_palliatus
ENSCAFG00000018979	ZIC3	100	98.073	ENSCGRG00001024527	Zic3	100	98.073	Cricetulus_griseus_chok1gshd
ENSCAFG00000018979	ZIC3	100	98.073	ENSDORG00000025481	Zic3	100	98.073	Dipodomys_ordii
ENSCAFG00000018979	ZIC3	100	100.000	ENSFCAG00000025684	ZIC3	100	100.000	Felis_catus
ENSCAFG00000018979	ZIC3	80	98.922	ENSFDAG00000014929	ZIC3	100	99.593	Fukomys_damarensis
ENSCAFG00000018979	ZIC3	94	81.321	ENSGAGG00000004149	ZIC3	92	81.321	Gopherus_agassizii
ENSCAFG00000018979	ZIC3	100	98.498	ENSGGOG00000011914	ZIC3	100	98.498	Gorilla_gorilla
ENSCAFG00000018979	ZIC3	100	97.645	ENSHGLG00000006298	ZIC3	100	97.645	Heterocephalus_glaber_female
ENSCAFG00000018979	ZIC3	67	69.737	ENSHGLG00100002829	ZIC3	100	77.707	Heterocephalus_glaber_male
ENSCAFG00000018979	ZIC3	100	98.073	ENSJJAG00000022714	Zic3	100	98.073	Jaculus_jaculus
ENSCAFG00000018979	ZIC3	100	77.302	ENSLACG00000014597	ZIC3	100	77.302	Latimeria_chalumnae
ENSCAFG00000018979	ZIC3	88	95.134	ENSLAFG00000007048	ZIC3	99	95.134	Loxodonta_africana
ENSCAFG00000018979	ZIC3	100	98.498	ENSMFAG00000027018	ZIC3	100	98.498	Macaca_fascicularis
ENSCAFG00000018979	ZIC3	100	98.026	ENSMMUG00000002023	ZIC3	100	98.026	Macaca_mulatta
ENSCAFG00000018979	ZIC3	100	98.498	ENSMNEG00000040682	ZIC3	100	98.498	Macaca_nemestrina
ENSCAFG00000018979	ZIC3	100	98.498	ENSMLEG00000004378	ZIC3	100	98.498	Mandrillus_leucophaeus
ENSCAFG00000018979	ZIC3	100	97.859	ENSMAUG00000009402	Zic3	100	97.859	Mesocricetus_auratus
ENSCAFG00000018979	ZIC3	100	98.501	ENSMICG00000042529	ZIC3	100	98.501	Microcebus_murinus
ENSCAFG00000018979	ZIC3	100	97.645	ENSMOCG00000020544	Zic3	100	97.645	Microtus_ochrogaster
ENSCAFG00000018979	ZIC3	100	97.645	MGP_CAROLIEiJ_G0033101	Zic3	100	99.593	Mus_caroli
ENSCAFG00000018979	ZIC3	100	97.645	ENSMUSG00000067860	Zic3	100	99.593	Mus_musculus
ENSCAFG00000018979	ZIC3	100	97.645	MGP_PahariEiJ_G0031644	Zic3	100	99.593	Mus_pahari
ENSCAFG00000018979	ZIC3	100	97.645	MGP_SPRETEiJ_G0034256	Zic3	100	99.593	Mus_spretus
ENSCAFG00000018979	ZIC3	100	97.430	ENSNGAG00000023346	Zic3	100	97.430	Nannospalax_galili
ENSCAFG00000018979	ZIC3	78	98.577	ENSNLEG00000003005	-	100	98.577	Nomascus_leucogenys
ENSCAFG00000018979	ZIC3	100	98.287	ENSODEG00000005556	ZIC3	100	98.287	Octodon_degus
ENSCAFG00000018979	ZIC3	100	98.498	ENSPPAG00000030013	ZIC3	100	98.498	Pan_paniscus
ENSCAFG00000018979	ZIC3	100	99.572	ENSPPRG00000010839	ZIC3	100	99.572	Panthera_pardus
ENSCAFG00000018979	ZIC3	100	98.498	ENSPTRG00000043849	ZIC3	100	98.498	Pan_troglodytes
ENSCAFG00000018979	ZIC3	100	98.498	ENSPANG00000011357	ZIC3	100	98.498	Papio_anubis
ENSCAFG00000018979	ZIC3	100	73.932	ENSPKIG00000017705	zic3	100	73.932	Paramormyrops_kingsleyae
ENSCAFG00000018979	ZIC3	62	90.068	ENSPSIG00000011896	ZIC3	99	90.068	Pelodiscus_sinensis
ENSCAFG00000018979	ZIC3	100	97.859	ENSPEMG00000022168	Zic3	100	97.859	Peromyscus_maniculatus_bairdii
ENSCAFG00000018979	ZIC3	100	98.283	ENSPCOG00000021557	ZIC3	100	98.283	Propithecus_coquereli
ENSCAFG00000018979	ZIC3	100	97.216	ENSRNOG00000000861	Zic3	100	97.216	Rattus_norvegicus
ENSCAFG00000018979	ZIC3	100	98.712	ENSRBIG00000030660	ZIC3	100	98.712	Rhinopithecus_bieti
ENSCAFG00000018979	ZIC3	100	98.712	ENSRROG00000028410	ZIC3	100	98.712	Rhinopithecus_roxellana
ENSCAFG00000018979	ZIC3	100	98.287	ENSSBOG00000024684	ZIC3	100	98.287	Saimiri_boliviensis_boliviensis
ENSCAFG00000018979	ZIC3	99	68.884	ENSSFOG00015008079	zic3	100	68.884	Scleropages_formosus
ENSCAFG00000018979	ZIC3	99	75.322	ENSSFOG00015011731	zic3	100	75.322	Scleropages_formosus
ENSCAFG00000018979	ZIC3	84	83.797	ENSTGUG00000002155	ZIC3	100	83.797	Taeniopygia_guttata
ENSCAFG00000018979	ZIC3	100	100.000	ENSVVUG00000021378	ZIC3	100	100.000	Vulpes_vulpes
ENSCAFG00000018979	ZIC3	100	77.186	ENSXETG00000024458	zic3	100	77.186	Xenopus_tropicalis