EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • Orthologs
Description
Ensembl ID
ENSCAFG00000019249 (Gene tree)
Gene ID
100855690
Gene Symbol
RPA1
Alias
-
Full Name
replication protein A1
Gene Type
protein_coding
Species
Canis_familiaris
Status
putative
Strand
Plus strand
Length
76158 bases
Position
chr9:45958689-46034846
Accession
45702
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCAFP00000028391tRNA_anti-codonPF01336.258e-1211
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCAFT00000030554-2760XM_003639262ENSCAFP00000028391616 (aa)XP_003639310E2R436
Gene Model
Click here to download ENSCAFG00000019249's gene model file
Pathways
Pathway IDPathway NameSource
cfa03030DNA replicationKEGG
cfa03420Nucleotide excision repairKEGG
cfa03430Mismatch repairKEGG
cfa03440Homologous recombinationKEGG
cfa03460Fanconi anemia pathwayKEGG
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCAFG00000019249RPA19963.175ENSAPOG00000011658rpa19962.520Acanthochromis_polyacanthus
ENSCAFG00000019249RPA19758.958ENSAPOG00000019409RPA19258.750Acanthochromis_polyacanthus
ENSCAFG00000019249RPA19995.402ENSAMEG00000007706RPA19895.402Ailuropoda_melanoleuca
ENSCAFG00000019249RPA19558.305ENSACIG00000012881RPA19958.136Amphilophus_citrinellus
ENSCAFG00000019249RPA19558.404ENSACIG00000007277rpa19958.234Amphilophus_citrinellus
ENSCAFG00000019249RPA19963.830ENSAOCG00000023376rpa19963.502Amphiprion_ocellaris
ENSCAFG00000019249RPA19954.000ENSAOCG00000009003RPA19954.405Amphiprion_ocellaris
ENSCAFG00000019249RPA19953.172ENSAPEG00000019132RPA19953.474Amphiprion_percula
ENSCAFG00000019249RPA19963.993ENSAPEG00000008634rpa19963.683Amphiprion_percula
ENSCAFG00000019249RPA19954.824ENSATEG00000006443RPA19954.058Anabas_testudineus
ENSCAFG00000019249RPA19464.433ENSATEG00000022024rpa19964.089Anabas_testudineus
ENSCAFG00000019249RPA19865.583ENSAPLG00000012442RPA19472.772Anas_platyrhynchos
ENSCAFG00000019249RPA19963.166ENSACAG00000014490RPA19963.871Anolis_carolinensis
ENSCAFG00000019249RPA19888.391ENSANAG00000023456RPA110088.391Aotus_nancymaae
ENSCAFG00000019249RPA19363.230ENSACLG00000006640rpa19963.058Astatotilapia_calliptera
ENSCAFG00000019249RPA19957.837ENSACLG00000005223RPA19957.524Astatotilapia_calliptera
ENSCAFG00000019249RPA19961.889ENSAMXG00000008418rpa19961.564Astyanax_mexicanus
ENSCAFG00000019249RPA110092.208ENSBTAG00000009711RPA110092.208Bos_taurus
ENSCAFG00000019249RPA17631.368WBGene00017546rpa-17131.368Caenorhabditis_elegans
ENSCAFG00000019249RPA110088.636ENSCJAG00000001848RPA110088.636Callithrix_jacchus
ENSCAFG00000019249RPA1100100.000ENSCAFG00020009847RPA1100100.000Canis_lupus_dingo
ENSCAFG00000019249RPA110092.208ENSCHIG00000026308RPA110092.208Capra_hircus
ENSCAFG00000019249RPA110090.762ENSTSYG00000003482-10090.762Carlito_syrichta
ENSCAFG00000019249RPA110086.688ENSCPOG00000000035RPA110086.688Cavia_porcellus
ENSCAFG00000019249RPA110077.383ENSCCAG00000010981RPA110077.383Cebus_capucinus
ENSCAFG00000019249RPA19988.274ENSCLAG00000005185-9988.274Chinchilla_lanigera
ENSCAFG00000019249RPA110083.604ENSCLAG00000015045-10083.604Chinchilla_lanigera
ENSCAFG00000019249RPA110077.221ENSCSAG00000013833RPA110077.903Chlorocebus_sabaeus
ENSCAFG00000019249RPA17192.483ENSCHOG00000009454-10092.483Choloepus_hoffmanni
ENSCAFG00000019249RPA19587.755ENSCHOG00000013540-10087.755Choloepus_hoffmanni
ENSCAFG00000019249RPA19977.886ENSCPBG00000020377RPA19978.421Chrysemys_picta_bellii
ENSCAFG00000019249RPA19940.879ENSCING00000023482-9840.686Ciona_intestinalis
ENSCAFG00000019249RPA19885.289ENSCANG00000030911RPA110085.289Colobus_angolensis_palliatus
ENSCAFG00000019249RPA19988.997ENSCGRG00001008197Rpa19988.997Cricetulus_griseus_chok1gshd
ENSCAFG00000019249RPA18188.166ENSCGRG00000000582Rpa19988.166Cricetulus_griseus_crigri
ENSCAFG00000019249RPA19961.238ENSCSEG00000013066rpa19960.912Cynoglossus_semilaevis
ENSCAFG00000019249RPA19951.675ENSCSEG00000012726RPA19852.650Cynoglossus_semilaevis
ENSCAFG00000019249RPA19554.419ENSCVAG00000013446-9654.264Cyprinodon_variegatus
ENSCAFG00000019249RPA19963.132ENSCVAG00000019431rpa19963.636Cyprinodon_variegatus
ENSCAFG00000019249RPA19963.029ENSDARG00000003938rpa19962.378Danio_rerio
ENSCAFG00000019249RPA19990.774ENSDNOG00000017218RPA19990.774Dasypus_novemcinctus
ENSCAFG00000019249RPA110088.961ENSDORG00000006199Rpa110088.961Dipodomys_ordii
ENSCAFG00000019249RPA19942.512FBgn0010173RpA-709842.673Drosophila_melanogaster
ENSCAFG00000019249RPA18386.598ENSETEG00000017608RPA18286.598Echinops_telfairi
ENSCAFG00000019249RPA19892.359ENSEASG00005009372RPA110090.145Equus_asinus_asinus
ENSCAFG00000019249RPA110092.695ENSECAG00000023886RPA110092.695Equus_caballus
ENSCAFG00000019249RPA16892.143ENSEEUG00000002186-6892.143Erinaceus_europaeus
ENSCAFG00000019249RPA18856.354ENSELUG00000006136RPA19955.801Esox_lucius
ENSCAFG00000019249RPA19960.940ENSELUG00000021071rpa19960.454Esox_lucius
ENSCAFG00000019249RPA110093.193ENSFCAG00000006306RPA19993.193Felis_catus
ENSCAFG00000019249RPA110074.637ENSFALG00000006575RPA19974.637Ficedula_albicollis
ENSCAFG00000019249RPA19989.088ENSFDAG00000007720RPA19989.088Fukomys_damarensis
ENSCAFG00000019249RPA19961.741ENSFHEG00000003580rpa19961.576Fundulus_heteroclitus
ENSCAFG00000019249RPA19959.411ENSGMOG00000010382rpa19959.247Gadus_morhua
ENSCAFG00000019249RPA110074.230ENSGALG00000003072RPA19974.230Gallus_gallus
ENSCAFG00000019249RPA19962.603ENSGAFG00000012916rpa19962.273Gambusia_affinis
ENSCAFG00000019249RPA19954.614ENSGAFG00000020953RPA19954.394Gambusia_affinis
ENSCAFG00000019249RPA19961.551ENSGACG00000010856rpa19961.066Gasterosteus_aculeatus
ENSCAFG00000019249RPA19977.886ENSGAGG00000013611RPA19977.886Gopherus_agassizii
ENSCAFG00000019249RPA110086.201ENSGGOG00000014186RPA110086.201Gorilla_gorilla
ENSCAFG00000019249RPA19654.409ENSHBUG00000009348RPA19954.077Haplochromis_burtoni
ENSCAFG00000019249RPA19963.339ENSHBUG00000017773rpa19963.011Haplochromis_burtoni
ENSCAFG00000019249RPA19989.088ENSHGLG00000008846RPA110089.088Heterocephalus_glaber_female
ENSCAFG00000019249RPA110083.766ENSHGLG00100000799-10083.766Heterocephalus_glaber_male
ENSCAFG00000019249RPA110075.974ENSHGLG00100002005-10075.649Heterocephalus_glaber_male
ENSCAFG00000019249RPA19989.088ENSHGLG00100017755-10089.088Heterocephalus_glaber_male
ENSCAFG00000019249RPA19944.318ENSHCOG00000000351RPA19844.318Hippocampus_comes
ENSCAFG00000019249RPA19960.720ENSHCOG00000001401rpa19960.884Hippocampus_comes
ENSCAFG00000019249RPA19961.789ENSIPUG00000004400rpa19961.463Ictalurus_punctatus
ENSCAFG00000019249RPA19883.388ENSSTOG00000022475RPA19883.388Ictidomys_tridecemlineatus
ENSCAFG00000019249RPA19589.626ENSJJAG00000000876Rpa19889.626Jaculus_jaculus
ENSCAFG00000019249RPA19954.443ENSKMAG00000000234RPA19954.281Kryptolebias_marmoratus
ENSCAFG00000019249RPA19961.538ENSKMAG00000005605rpa19961.866Kryptolebias_marmoratus
ENSCAFG00000019249RPA19963.562ENSLBEG00000021604rpa19963.562Labrus_bergylta
ENSCAFG00000019249RPA19762.358ENSLBEG00000002281RPA18561.905Labrus_bergylta
ENSCAFG00000019249RPA18166.533ENSLACG00000007210RPA19966.333Latimeria_chalumnae
ENSCAFG00000019249RPA19967.101ENSLOCG00000006397rpa19967.101Lepisosteus_oculatus
ENSCAFG00000019249RPA19987.903ENSLAFG00000015354RPA19987.903Loxodonta_africana
ENSCAFG00000019249RPA18288.735ENSMFAG00000036138-10089.546Macaca_fascicularis
ENSCAFG00000019249RPA19888.760ENSMMUG00000011604-10089.439Macaca_mulatta
ENSCAFG00000019249RPA110082.010ENSMMUG00000002442-10082.010Macaca_mulatta
ENSCAFG00000019249RPA18988.000ENSMNEG00000029837-10088.000Macaca_nemestrina
ENSCAFG00000019249RPA110085.552ENSMNEG00000031632-10086.224Macaca_nemestrina
ENSCAFG00000019249RPA19882.673ENSMLEG00000038768-10083.361Mandrillus_leucophaeus
ENSCAFG00000019249RPA19963.607ENSMAMG00000017993rpa19962.951Mastacembelus_armatus
ENSCAFG00000019249RPA19952.148ENSMAMG00000020097RPA19952.290Mastacembelus_armatus
ENSCAFG00000019249RPA19957.837ENSMZEG00005024731RPA19957.524Maylandia_zebra
ENSCAFG00000019249RPA19963.339ENSMZEG00005007551rpa19963.011Maylandia_zebra
ENSCAFG00000019249RPA19973.906ENSMGAG00000005315RPA19973.906Meleagris_gallopavo
ENSCAFG00000019249RPA19789.500ENSMAUG00000010474Rpa19989.500Mesocricetus_auratus
ENSCAFG00000019249RPA110091.558ENSMICG00000012867RPA110091.558Microcebus_murinus
ENSCAFG00000019249RPA19988.254ENSMOCG00000013019Rpa19988.254Microtus_ochrogaster
ENSCAFG00000019249RPA19962.193ENSMMOG00000014292rpa19962.669Mola_mola
ENSCAFG00000019249RPA19756.260ENSMMOG00000010868RPA19759.341Mola_mola
ENSCAFG00000019249RPA19984.528ENSMODG00000010549RPA19984.528Monodelphis_domestica
ENSCAFG00000019249RPA19859.871ENSMALG00000001208RPA18459.657Monopterus_albus
ENSCAFG00000019249RPA19963.980ENSMALG00000011453rpa19963.487Monopterus_albus
ENSCAFG00000019249RPA19987.662MGP_CAROLIEiJ_G0016734Rpa19987.662Mus_caroli
ENSCAFG00000019249RPA19986.013ENSMUSG00000000751Rpa19986.013Mus_musculus
ENSCAFG00000019249RPA19988.691MGP_PahariEiJ_G0017871Rpa19988.691Mus_pahari
ENSCAFG00000019249RPA19985.875MGP_SPRETEiJ_G0017577Rpa19985.875Mus_spretus
ENSCAFG00000019249RPA110095.455ENSMPUG00000013119RPA110095.455Mustela_putorius_furo
ENSCAFG00000019249RPA110088.084ENSMLUG00000006113RPA110088.084Myotis_lucifugus
ENSCAFG00000019249RPA19985.413ENSNGAG00000004522Rpa19785.413Nannospalax_galili
ENSCAFG00000019249RPA19463.032ENSNBRG00000020595rpa19962.862Neolamprologus_brichardi
ENSCAFG00000019249RPA19656.661ENSNBRG00000009672RPA19556.324Neolamprologus_brichardi
ENSCAFG00000019249RPA110088.149ENSNLEG00000017149RPA110088.655Nomascus_leucogenys
ENSCAFG00000019249RPA19874.086ENSMEUG00000006714RPA19974.086Notamacropus_eugenii
ENSCAFG00000019249RPA110082.720ENSODEG00000009038RPA110082.720Octodon_degus
ENSCAFG00000019249RPA19963.592ENSONIG00000013135rpa19963.269Oreochromis_niloticus
ENSCAFG00000019249RPA19883.555ENSOANG00000010880RPA19983.721Ornithorhynchus_anatinus
ENSCAFG00000019249RPA110086.533ENSOCUG00000001504RPA110086.533Oryctolagus_cuniculus
ENSCAFG00000019249RPA19963.339ENSORLG00000004856rpa19962.684Oryzias_latipes
ENSCAFG00000019249RPA19953.905ENSORLG00000003368RPA19953.752Oryzias_latipes
ENSCAFG00000019249RPA19963.502ENSORLG00020008980rpa19962.848Oryzias_latipes_hni
ENSCAFG00000019249RPA19952.481ENSORLG00020015284RPA19952.331Oryzias_latipes_hni
ENSCAFG00000019249RPA17060.739ENSORLG00015005867-9960.508Oryzias_latipes_hsok
ENSCAFG00000019249RPA19963.502ENSORLG00015013982rpa19962.848Oryzias_latipes_hsok
ENSCAFG00000019249RPA19954.290ENSORLG00015020383RPA19954.134Oryzias_latipes_hsok
ENSCAFG00000019249RPA19953.470ENSOMEG00000011040RPA19956.336Oryzias_melastigma
ENSCAFG00000019249RPA19961.564ENSOMEG00000004704rpa19961.075Oryzias_melastigma
ENSCAFG00000019249RPA110089.448ENSOGAG00000005581-10089.448Otolemur_garnettii
ENSCAFG00000019249RPA19485.263ENSOGAG00000029379-10085.263Otolemur_garnettii
ENSCAFG00000019249RPA110092.208ENSOARG00000014479RPA110092.208Ovis_aries
ENSCAFG00000019249RPA110088.149ENSPPAG00000039680RPA110088.655Pan_paniscus
ENSCAFG00000019249RPA110092.869ENSPPRG00000011807RPA19992.869Panthera_pardus
ENSCAFG00000019249RPA110092.707ENSPTIG00000007898RPA19992.707Panthera_tigris_altaica
ENSCAFG00000019249RPA110088.149ENSPTRG00000008539RPA110088.655Pan_troglodytes
ENSCAFG00000019249RPA110088.636ENSPANG00000024592RPA110089.303Papio_anubis
ENSCAFG00000019249RPA19462.436ENSPKIG00000008053rpa19462.842Paramormyrops_kingsleyae
ENSCAFG00000019249RPA19777.500ENSPSIG00000015617RPA19977.500Pelodiscus_sinensis
ENSCAFG00000019249RPA19954.207ENSPMGG00000000543RPA19956.063Periophthalmus_magnuspinnatus
ENSCAFG00000019249RPA19862.521ENSPMGG00000011589rpa19962.023Periophthalmus_magnuspinnatus
ENSCAFG00000019249RPA19989.723ENSPEMG00000021061Rpa19989.723Peromyscus_maniculatus_bairdii
ENSCAFG00000019249RPA19982.602ENSPCIG00000019049RPA19983.415Phascolarctos_cinereus
ENSCAFG00000019249RPA19962.787ENSPFOG00000003987rpa19962.459Poecilia_formosa
ENSCAFG00000019249RPA19962.459ENSPLAG00000004984rpa19962.131Poecilia_latipinna
ENSCAFG00000019249RPA19453.612ENSPLAG00000008844-9753.451Poecilia_latipinna
ENSCAFG00000019249RPA19454.240ENSPMEG00000003627-9754.414Poecilia_mexicana
ENSCAFG00000019249RPA19962.951ENSPMEG00000020602rpa19963.796Poecilia_mexicana
ENSCAFG00000019249RPA19454.966ENSPREG00000010174rpa19654.966Poecilia_reticulata
ENSCAFG00000019249RPA19952.585ENSPREG00000010119RPA110051.858Poecilia_reticulata
ENSCAFG00000019249RPA110092.045ENSPCOG00000001799RPA110092.045Propithecus_coquereli
ENSCAFG00000019249RPA110091.558ENSPVAG00000002149RPA110091.558Pteropus_vampyrus
ENSCAFG00000019249RPA19963.502ENSPNYG00000016316rpa19963.175Pundamilia_nyererei
ENSCAFG00000019249RPA19957.524ENSPNYG00000024165RPA19957.210Pundamilia_nyererei
ENSCAFG00000019249RPA19854.817ENSPNAG00000008599rpa19555.766Pygocentrus_nattereri
ENSCAFG00000019249RPA19988.581ENSRNOG00000003123Rpa19988.581Rattus_norvegicus
ENSCAFG00000019249RPA110088.655ENSRBIG00000036587RPA110088.655Rhinopithecus_bieti
ENSCAFG00000019249RPA110083.468ENSRROG00000043278RPA110083.468Rhinopithecus_roxellana
ENSCAFG00000019249RPA19731.915YAR007CRFA19731.856Saccharomyces_cerevisiae
ENSCAFG00000019249RPA19884.603ENSSBOG00000030233RPA19984.603Saimiri_boliviensis_boliviensis
ENSCAFG00000019249RPA19984.590ENSSHAG00000007969RPA19884.918Sarcophilus_harrisii
ENSCAFG00000019249RPA19964.379ENSSFOG00015005362rpa19264.379Scleropages_formosus
ENSCAFG00000019249RPA19953.263ENSSMAG00000019746RPA19952.656Scophthalmus_maximus
ENSCAFG00000019249RPA19952.423ENSSDUG00000016358RPA19952.423Seriola_dumerili
ENSCAFG00000019249RPA19965.139ENSSDUG00000011949rpa19964.812Seriola_dumerili
ENSCAFG00000019249RPA19965.303ENSSLDG00000011806rpa19964.975Seriola_lalandi_dorsalis
ENSCAFG00000019249RPA18964.501ENSSLDG00000020784RPA18664.009Seriola_lalandi_dorsalis
ENSCAFG00000019249RPA18885.294ENSSARG00000007506RPA110070.083Sorex_araneus
ENSCAFG00000019249RPA19773.782ENSSPUG00000007223RPA19973.782Sphenodon_punctatus
ENSCAFG00000019249RPA19657.966ENSSPAG00000011165RPA19757.143Stegastes_partitus
ENSCAFG00000019249RPA19963.725ENSSPAG00000009903rpa19963.399Stegastes_partitus
ENSCAFG00000019249RPA19890.547ENSSSCG00000017822RPA110090.547Sus_scrofa
ENSCAFG00000019249RPA110074.230ENSTGUG00000005775RPA19974.230Taeniopygia_guttata
ENSCAFG00000019249RPA19958.586ENSTRUG00000000405RPA18758.384Takifugu_rubripes
ENSCAFG00000019249RPA19964.803ENSTRUG00000003616rpa19964.145Takifugu_rubripes
ENSCAFG00000019249RPA19965.309ENSTNIG00000016199rpa19965.309Tetraodon_nigroviridis
ENSCAFG00000019249RPA18797.674ENSTBEG00000002709RPA18997.674Tupaia_belangeri
ENSCAFG00000019249RPA19991.531ENSTTRG00000001169RPA19991.531Tursiops_truncatus
ENSCAFG00000019249RPA18896.154ENSUAMG00000015676RPA19995.568Ursus_americanus
ENSCAFG00000019249RPA110095.779ENSUMAG00000009328RPA110095.779Ursus_maritimus
ENSCAFG00000019249RPA110089.448ENSVPAG00000009443RPA110089.448Vicugna_pacos
ENSCAFG00000019249RPA110099.026ENSVVUG00000021715RPA110099.026Vulpes_vulpes
ENSCAFG00000019249RPA19973.065ENSXETG00000013538rpa19974.468Xenopus_tropicalis
ENSCAFG00000019249RPA19556.410ENSXCOG00000009899-9956.239Xiphophorus_couchianus
ENSCAFG00000019249RPA19360.733ENSXCOG00000010068rpa19560.558Xiphophorus_couchianus
ENSCAFG00000019249RPA19961.148ENSXMAG00000004102rpa19962.610Xiphophorus_maculatus
ENSCAFG00000019249RPA19163.492ENSXMAG00000010333RPA18963.265Xiphophorus_maculatus

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