EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAFG00000019273 (Gene tree)
Gene ID: 491201
Gene Symbol: -
Alias: -
Full Name: TSR1%2C ribosome maturation factor
Gene Type: protein_coding
Species: Canis_familiaris
Status: putative
Strand: Minus strand
Length: 9175 bases
Position: chr9:46421656-46430830
Accession: 491201
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00000028436	AARP2CN	PF08142.12	3.3e-21	1	1
ENSCAFP00000028435	AARP2CN	PF08142.12	3.5e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00000030599	-	1971	-	ENSCAFP00000028436	656 (aa)	-	E2QYA6
ENSCAFT00000030598	-	2175	XM_548321	ENSCAFP00000028435	725 (aa)	XP_548321	F1PXP0

Gene Model

Click here to download ENSCAFG00000019273's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00000019273's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAFG00000019273	-	100	99.848	ENSCAFG00000002106	-	90	99.310

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00000019273	-	100	87.405	ENSG00000167721	TSR1	98	83.158	Homo_sapiens
ENSCAFG00000019273	-	100	56.287	ENSAPOG00000020891	tsr1	89	52.918	Acanthochromis_polyacanthus
ENSCAFG00000019273	-	100	92.643	ENSAMEG00000007599	TSR1	89	91.701	Ailuropoda_melanoleuca
ENSCAFG00000019273	-	100	58.006	ENSACIG00000007090	tsr1	89	54.336	Amphilophus_citrinellus
ENSCAFG00000019273	-	100	56.112	ENSAOCG00000023284	tsr1	89	53.200	Amphiprion_ocellaris
ENSCAFG00000019273	-	100	56.406	ENSAPEG00000008452	tsr1	87	57.290	Amphiprion_percula
ENSCAFG00000019273	-	100	55.108	ENSATEG00000021961	tsr1	89	53.175	Anabas_testudineus
ENSCAFG00000019273	-	100	68.778	ENSAPLG00000013422	TSR1	89	69.080	Anas_platyrhynchos
ENSCAFG00000019273	-	78	57.118	ENSACAG00000000859	TSR1	92	57.461	Anolis_carolinensis
ENSCAFG00000019273	-	100	87.976	ENSANAG00000031071	TSR1	90	87.741	Aotus_nancymaae
ENSCAFG00000019273	-	100	56.686	ENSACLG00000007595	tsr1	89	53.200	Astatotilapia_calliptera
ENSCAFG00000019273	-	56	49.279	ENSAMXG00000008470	tsr1	95	47.368	Astyanax_mexicanus
ENSCAFG00000019273	-	100	90.107	ENSBTAG00000004225	TSR1	90	89.945	Bos_taurus
ENSCAFG00000019273	-	96	42.260	WBGene00006497	tag-151	89	37.550	Caenorhabditis_elegans
ENSCAFG00000019273	-	100	87.823	ENSCJAG00000012456	TSR1	90	87.603	Callithrix_jacchus
ENSCAFG00000019273	-	100	100.000	ENSCAFG00020009728	TSR1	98	92.428	Canis_lupus_dingo
ENSCAFG00000019273	-	100	90.107	ENSCHIG00000023935	TSR1	90	89.945	Capra_hircus
ENSCAFG00000019273	-	100	87.879	ENSTSYG00000005468	TSR1	90	87.741	Carlito_syrichta
ENSCAFG00000019273	-	100	86.226	ENSCPOG00000014833	TSR1	96	86.226	Cavia_porcellus
ENSCAFG00000019273	-	100	88.843	ENSCCAG00000028962	TSR1	95	88.705	Cebus_capucinus
ENSCAFG00000019273	-	100	87.775	ENSCATG00000044262	TSR1	90	87.500	Cercocebus_atys
ENSCAFG00000019273	-	100	87.215	ENSCLAG00000005567	TSR1	90	86.501	Chinchilla_lanigera
ENSCAFG00000019273	-	100	87.709	ENSCSAG00000013788	TSR1	90	87.363	Chlorocebus_sabaeus
ENSCAFG00000019273	-	100	70.499	ENSCPBG00000020363	TSR1	87	66.849	Chrysemys_picta_bellii
ENSCAFG00000019273	-	97	47.840	ENSCING00000020658	-	92	43.683	Ciona_intestinalis
ENSCAFG00000019273	-	96	46.812	ENSCSAVG00000001875	-	92	42.530	Ciona_savignyi
ENSCAFG00000019273	-	100	78.691	ENSCANG00000033056	TSR1	89	79.310	Colobus_angolensis_palliatus
ENSCAFG00000019273	-	100	85.671	ENSCGRG00001023942	Tsr1	90	85.007	Cricetulus_griseus_chok1gshd
ENSCAFG00000019273	-	100	79.268	ENSCGRG00000013015	Tsr1	89	79.724	Cricetulus_griseus_crigri
ENSCAFG00000019273	-	100	55.539	ENSCSEG00000013009	tsr1	89	52.730	Cynoglossus_semilaevis
ENSCAFG00000019273	-	100	56.112	ENSCVAG00000000506	tsr1	89	52.547	Cyprinodon_variegatus
ENSCAFG00000019273	-	100	56.140	ENSDARG00000007744	tsr1	89	51.957	Danio_rerio
ENSCAFG00000019273	-	100	88.432	ENSDNOG00000004715	TSR1	96	89.041	Dasypus_novemcinctus
ENSCAFG00000019273	-	100	73.517	ENSDORG00000023234	-	93	73.517	Dipodomys_ordii
ENSCAFG00000019273	-	100	85.823	ENSDORG00000016371	-	90	84.828	Dipodomys_ordii
ENSCAFG00000019273	-	96	45.053	FBgn0037073	Tsr1	89	42.231	Drosophila_melanogaster
ENSCAFG00000019273	-	91	90.265	ENSETEG00000017534	TSR1	82	90.265	Echinops_telfairi
ENSCAFG00000019273	-	99	54.711	ENSEBUG00000013731	TSR1	88	49.713	Eptatretus_burgeri
ENSCAFG00000019273	-	100	91.933	ENSEASG00005009302	TSR1	88	91.047	Equus_asinus_asinus
ENSCAFG00000019273	-	100	91.933	ENSECAG00000009114	TSR1	90	91.047	Equus_caballus
ENSCAFG00000019273	-	100	55.685	ENSELUG00000020984	tsr1	86	52.400	Esox_lucius
ENSCAFG00000019273	-	100	92.530	ENSFCAG00000006313	TSR1	90	91.724	Felis_catus
ENSCAFG00000019273	-	100	70.482	ENSFALG00000006532	TSR1	90	66.757	Ficedula_albicollis
ENSCAFG00000019273	-	100	87.367	ENSFDAG00000006038	TSR1	90	86.777	Fukomys_damarensis
ENSCAFG00000019273	-	100	55.848	ENSFHEG00000003626	tsr1	89	52.255	Fundulus_heteroclitus
ENSCAFG00000019273	-	100	53.453	ENSGMOG00000010336	tsr1	89	51.012	Gadus_morhua
ENSCAFG00000019273	-	100	55.848	ENSGAFG00000012993	tsr1	89	52.800	Gambusia_affinis
ENSCAFG00000019273	-	100	54.955	ENSGACG00000010843	tsr1	89	52.027	Gasterosteus_aculeatus
ENSCAFG00000019273	-	50	44.628	ENSGAGG00000000440	-	98	44.628	Gopherus_agassizii
ENSCAFG00000019273	-	100	70.821	ENSGAGG00000025619	-	90	67.490	Gopherus_agassizii
ENSCAFG00000019273	-	100	87.102	ENSGGOG00000001704	TSR1	90	87.500	Gorilla_gorilla
ENSCAFG00000019273	-	100	56.729	ENSHBUG00000017904	tsr1	87	57.038	Haplochromis_burtoni
ENSCAFG00000019273	-	100	88.128	ENSHGLG00000012806	-	90	87.190	Heterocephalus_glaber_female
ENSCAFG00000019273	-	100	76.712	ENSHGLG00000015688	-	88	75.749	Heterocephalus_glaber_female
ENSCAFG00000019273	-	100	88.128	ENSHGLG00100015392	TSR1	90	87.190	Heterocephalus_glaber_male
ENSCAFG00000019273	-	100	58.422	ENSHCOG00000001432	tsr1	89	53.699	Hippocampus_comes
ENSCAFG00000019273	-	100	56.388	ENSIPUG00000004618	tsr1	89	53.191	Ictalurus_punctatus
ENSCAFG00000019273	-	100	87.842	ENSSTOG00000011819	TSR1	90	87.620	Ictidomys_tridecemlineatus
ENSCAFG00000019273	-	96	83.438	ENSJJAG00000019505	Tsr1	84	82.938	Jaculus_jaculus
ENSCAFG00000019273	-	100	55.900	ENSKMAG00000005763	tsr1	89	52.069	Kryptolebias_marmoratus
ENSCAFG00000019273	-	100	55.411	ENSLBEG00000021823	tsr1	89	53.183	Labrus_bergylta
ENSCAFG00000019273	-	100	65.672	ENSLACG00000002197	TSR1	90	61.465	Latimeria_chalumnae
ENSCAFG00000019273	-	100	57.612	ENSLOCG00000006491	TSR1	88	57.761	Lepisosteus_oculatus
ENSCAFG00000019273	-	100	87.912	ENSMFAG00000021330	TSR1	90	87.637	Macaca_fascicularis
ENSCAFG00000019273	-	100	87.500	ENSMMUG00000017519	TSR1	90	87.225	Macaca_mulatta
ENSCAFG00000019273	-	100	87.709	ENSMNEG00000031382	TSR1	90	87.225	Macaca_nemestrina
ENSCAFG00000019273	-	100	87.637	ENSMLEG00000036733	TSR1	90	87.363	Mandrillus_leucophaeus
ENSCAFG00000019273	-	100	56.332	ENSMAMG00000017918	tsr1	89	52.375	Mastacembelus_armatus
ENSCAFG00000019273	-	100	57.122	ENSMZEG00005007477	tsr1	89	53.652	Maylandia_zebra
ENSCAFG00000019273	-	100	68.929	ENSMGAG00000005576	TSR1	90	65.437	Meleagris_gallopavo
ENSCAFG00000019273	-	100	89.954	ENSMICG00000012943	TSR1	90	89.669	Microcebus_murinus
ENSCAFG00000019273	-	100	85.410	ENSMOCG00000022764	Tsr1	90	84.319	Microtus_ochrogaster
ENSCAFG00000019273	-	100	55.912	ENSMMOG00000014280	tsr1	89	53.028	Mola_mola
ENSCAFG00000019273	-	100	77.812	ENSMODG00000010658	TSR1	90	76.066	Monodelphis_domestica
ENSCAFG00000019273	-	100	56.598	ENSMALG00000011681	tsr1	89	53.785	Monopterus_albus
ENSCAFG00000019273	-	100	86.606	MGP_CAROLIEiJ_G0016727	Tsr1	90	84.573	Mus_caroli
ENSCAFG00000019273	-	100	86.758	ENSMUSG00000038335	Tsr1	90	84.435	Mus_musculus
ENSCAFG00000019273	-	100	86.758	MGP_PahariEiJ_G0017864	Tsr1	90	84.711	Mus_pahari
ENSCAFG00000019273	-	100	86.910	MGP_SPRETEiJ_G0017570	Tsr1	90	84.711	Mus_spretus
ENSCAFG00000019273	-	100	92.530	ENSMPUG00000013000	TSR1	100	92.530	Mustela_putorius_furo
ENSCAFG00000019273	-	100	91.324	ENSMLUG00000003505	TSR1	90	91.322	Myotis_lucifugus
ENSCAFG00000019273	-	54	76.031	ENSNGAG00000020455	-	99	76.031	Nannospalax_galili
ENSCAFG00000019273	-	100	56.604	ENSNBRG00000020728	tsr1	89	52.918	Neolamprologus_brichardi
ENSCAFG00000019273	-	100	79.586	ENSNLEG00000017184	TSR1	89	81.241	Nomascus_leucogenys
ENSCAFG00000019273	-	100	73.059	ENSMEUG00000015828	TSR1	90	73.343	Notamacropus_eugenii
ENSCAFG00000019273	-	100	56.871	ENSONIG00000013131	tsr1	89	53.129	Oreochromis_niloticus
ENSCAFG00000019273	-	100	73.002	ENSOANG00000008637	TSR1	89	70.917	Ornithorhynchus_anatinus
ENSCAFG00000019273	-	100	87.994	ENSOCUG00000014256	TSR1	90	87.741	Oryctolagus_cuniculus
ENSCAFG00000019273	-	100	55.702	ENSORLG00000004926	tsr1	89	52.444	Oryzias_latipes
ENSCAFG00000019273	-	100	55.783	ENSORLG00020008792	tsr1	89	52.513	Oryzias_latipes_hni
ENSCAFG00000019273	-	100	55.556	ENSORLG00015013838	tsr1	89	52.312	Oryzias_latipes_hsok
ENSCAFG00000019273	-	100	55.831	ENSOMEG00000004830	tsr1	89	52.463	Oryzias_melastigma
ENSCAFG00000019273	-	100	86.596	ENSOGAG00000004492	TSR1	90	86.357	Otolemur_garnettii
ENSCAFG00000019273	-	100	89.954	ENSOARG00000015437	TSR1	88	89.807	Ovis_aries
ENSCAFG00000019273	-	100	87.557	ENSPPAG00000036355	TSR1	90	87.225	Pan_paniscus
ENSCAFG00000019273	-	100	92.073	ENSPPRG00000015519	-	90	91.448	Panthera_pardus
ENSCAFG00000019273	-	100	92.378	ENSPTIG00000010608	TSR1	90	91.724	Panthera_tigris_altaica
ENSCAFG00000019273	-	100	87.557	ENSPTRG00000008547	TSR1	90	87.225	Pan_troglodytes
ENSCAFG00000019273	-	100	84.203	ENSPANG00000024463	TSR1	90	84.066	Papio_anubis
ENSCAFG00000019273	-	100	55.887	ENSPKIG00000013972	tsr1	89	51.752	Paramormyrops_kingsleyae
ENSCAFG00000019273	-	100	68.182	ENSPSIG00000018258	TSR1	93	69.289	Pelodiscus_sinensis
ENSCAFG00000019273	-	99	58.118	ENSPMGG00000011577	tsr1	89	54.645	Periophthalmus_magnuspinnatus
ENSCAFG00000019273	-	100	86.454	ENSPEMG00000018033	Tsr1	90	83.333	Peromyscus_maniculatus_bairdii
ENSCAFG00000019273	-	100	76.596	ENSPCIG00000009357	TSR1	88	76.575	Phascolarctos_cinereus
ENSCAFG00000019273	-	97	55.244	ENSPFOG00000004483	TSR1	89	53.826	Poecilia_formosa
ENSCAFG00000019273	-	100	55.572	ENSPLAG00000022320	tsr1	89	52.925	Poecilia_latipinna
ENSCAFG00000019273	-	100	55.043	ENSPMEG00000004577	tsr1	89	52.450	Poecilia_mexicana
ENSCAFG00000019273	-	96	54.925	ENSPREG00000010354	tsr1	94	48.533	Poecilia_reticulata
ENSCAFG00000019273	-	100	79.730	ENSPPYG00000007792	TSR1	90	78.367	Pongo_abelii
ENSCAFG00000019273	-	58	88.372	ENSPCAG00000012973	-	72	88.372	Procavia_capensis
ENSCAFG00000019273	-	100	90.396	ENSPCOG00000017928	TSR1	99	85.794	Propithecus_coquereli
ENSCAFG00000019273	-	100	90.107	ENSPVAG00000002162	TSR1	90	89.532	Pteropus_vampyrus
ENSCAFG00000019273	-	100	56.831	ENSPNYG00000016163	tsr1	89	53.333	Pundamilia_nyererei
ENSCAFG00000019273	-	100	54.545	ENSPNAG00000008659	tsr1	89	52.243	Pygocentrus_nattereri
ENSCAFG00000019273	-	100	84.954	ENSRNOG00000002980	Tsr1	90	83.631	Rattus_norvegicus
ENSCAFG00000019273	-	100	87.775	ENSRBIG00000040016	TSR1	90	87.500	Rhinopithecus_bieti
ENSCAFG00000019273	-	100	87.775	ENSRROG00000030361	TSR1	90	87.500	Rhinopithecus_roxellana
ENSCAFG00000019273	-	95	32.061	YDL060W	-	80	32.278	Saccharomyces_cerevisiae
ENSCAFG00000019273	-	100	87.603	ENSSBOG00000020785	TSR1	90	87.466	Saimiri_boliviensis_boliviensis
ENSCAFG00000019273	-	100	76.818	ENSSHAG00000011394	TSR1	90	74.176	Sarcophilus_harrisii
ENSCAFG00000019273	-	100	58.209	ENSSFOG00015005455	tsr1	89	54.043	Scleropages_formosus
ENSCAFG00000019273	-	100	54.319	ENSSMAG00000009504	tsr1	89	52.785	Scophthalmus_maximus
ENSCAFG00000019273	-	100	55.556	ENSSDUG00000012074	tsr1	89	52.785	Seriola_dumerili
ENSCAFG00000019273	-	100	55.861	ENSSLDG00000002031	tsr1	89	53.457	Seriola_lalandi_dorsalis
ENSCAFG00000019273	-	100	73.003	ENSSARG00000000759	TSR1	90	73.003	Sorex_araneus
ENSCAFG00000019273	-	100	68.168	ENSSPUG00000007042	TSR1	90	64.898	Sphenodon_punctatus
ENSCAFG00000019273	-	100	55.248	ENSSPAG00000021951	tsr1	89	52.520	Stegastes_partitus
ENSCAFG00000019273	-	100	90.868	ENSSSCG00000038534	TSR1	90	90.771	Sus_scrofa
ENSCAFG00000019273	-	98	71.186	ENSTGUG00000005883	TSR1	89	71.779	Taeniopygia_guttata
ENSCAFG00000019273	-	100	58.457	ENSTRUG00000004665	tsr1	94	50.000	Takifugu_rubripes
ENSCAFG00000019273	-	100	58.084	ENSTNIG00000016196	tsr1	90	53.784	Tetraodon_nigroviridis
ENSCAFG00000019273	-	68	92.308	ENSTBEG00000015275	-	55	92.308	Tupaia_belangeri
ENSCAFG00000019273	-	100	90.107	ENSTTRG00000001177	TSR1	90	90.083	Tursiops_truncatus
ENSCAFG00000019273	-	100	94.512	ENSUAMG00000025160	TSR1	99	93.620	Ursus_americanus
ENSCAFG00000019273	-	100	94.207	ENSUMAG00000009294	TSR1	88	93.488	Ursus_maritimus
ENSCAFG00000019273	-	93	86.647	ENSVPAG00000000228	TSR1	99	86.647	Vicugna_pacos
ENSCAFG00000019273	-	100	98.628	ENSVVUG00000021767	TSR1	90	98.345	Vulpes_vulpes
ENSCAFG00000019273	-	100	61.319	ENSXETG00000023797	tsr1	89	61.883	Xenopus_tropicalis
ENSCAFG00000019273	-	100	56.437	ENSXCOG00000009635	tsr1	89	53.586	Xiphophorus_couchianus
ENSCAFG00000019273	-	100	55.409	ENSXMAG00000001397	tsr1	86	52.933	Xiphophorus_maculatus