EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCAFG00000019492 (Gene tree)
Gene ID: 489622
Gene Symbol: LRRC47
Alias: -
Full Name: leucine rich repeat containing 47
Gene Type: protein_coding
Species: Canis_familiaris
Status: putative
Strand: Minus strand
Length: 12425 bases
Position: chr5:58285615-58298039
Accession: 42801
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00000028823	B3_4	PF03483.17	1e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00000030989	-	4696	XM_546742	ENSCAFP00000028823	589 (aa)	XP_546742	F1PYM5

Gene Model

Click here to download ENSCAFG00000019492's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00000019492's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00000019492	LRRC47	99	84.192	ENSG00000130764	LRRC47	99	85.243	Homo_sapiens
ENSCAFG00000019492	LRRC47	97	53.739	ENSAPOG00000019553	lrrc47	99	54.087	Acanthochromis_polyacanthus
ENSCAFG00000019492	LRRC47	78	88.503	ENSAMEG00000009152	LRRC47	100	88.503	Ailuropoda_melanoleuca
ENSCAFG00000019492	LRRC47	66	66.321	ENSAPLG00000003167	LRRC47	100	64.767	Anas_platyrhynchos
ENSCAFG00000019492	LRRC47	64	67.546	ENSACAG00000008267	LRRC47	99	67.018	Anolis_carolinensis
ENSCAFG00000019492	LRRC47	99	83.505	ENSANAG00000025576	LRRC47	99	84.549	Aotus_nancymaae
ENSCAFG00000019492	LRRC47	98	84.696	ENSBTAG00000004738	LRRC47	99	84.000	Bos_taurus
ENSCAFG00000019492	LRRC47	100	99.660	ENSCAFG00020009667	LRRC47	99	99.307	Canis_lupus_dingo
ENSCAFG00000019492	LRRC47	99	84.786	ENSCHIG00000022607	LRRC47	95	85.432	Capra_hircus
ENSCAFG00000019492	LRRC47	94	81.508	ENSTSYG00000009326	LRRC47	96	83.842	Carlito_syrichta
ENSCAFG00000019492	LRRC47	64	77.188	ENSCAPG00000016517	LRRC47	100	76.658	Cavia_aperea
ENSCAFG00000019492	LRRC47	99	80.782	ENSCPOG00000014931	LRRC47	95	81.565	Cavia_porcellus
ENSCAFG00000019492	LRRC47	99	84.192	ENSCCAG00000024895	LRRC47	99	85.243	Cebus_capucinus
ENSCAFG00000019492	LRRC47	99	84.536	ENSCATG00000029337	LRRC47	99	85.069	Cercocebus_atys
ENSCAFG00000019492	LRRC47	99	81.583	ENSCLAG00000006093	LRRC47	99	82.087	Chinchilla_lanigera
ENSCAFG00000019492	LRRC47	99	84.708	ENSCSAG00000000727	LRRC47	99	85.243	Chlorocebus_sabaeus
ENSCAFG00000019492	LRRC47	99	61.730	ENSCPBG00000019404	LRRC47	95	61.431	Chrysemys_picta_bellii
ENSCAFG00000019492	LRRC47	78	81.128	ENSCANG00000030701	LRRC47	96	80.911	Colobus_angolensis_palliatus
ENSCAFG00000019492	LRRC47	94	78.597	ENSCGRG00001015159	Lrrc47	86	78.237	Cricetulus_griseus_chok1gshd
ENSCAFG00000019492	LRRC47	65	71.842	ENSCGRG00000017336	Lrrc47	100	71.883	Cricetulus_griseus_crigri
ENSCAFG00000019492	LRRC47	97	52.613	ENSCSEG00000006217	lrrc47	92	53.610	Cynoglossus_semilaevis
ENSCAFG00000019492	LRRC47	64	76.064	ENSDORG00000016594	Lrrc47	99	76.064	Dipodomys_ordii
ENSCAFG00000019492	LRRC47	99	87.285	ENSEASG00005021788	LRRC47	96	87.612	Equus_asinus_asinus
ENSCAFG00000019492	LRRC47	94	87.433	ENSECAG00000022472	LRRC47	86	87.433	Equus_caballus
ENSCAFG00000019492	LRRC47	99	50.673	ENSELUG00000017544	lrrc47	97	51.458	Esox_lucius
ENSCAFG00000019492	LRRC47	93	89.964	ENSFCAG00000011632	LRRC47	96	90.092	Felis_catus
ENSCAFG00000019492	LRRC47	73	62.818	ENSFALG00000009631	LRRC47	99	61.556	Ficedula_albicollis
ENSCAFG00000019492	LRRC47	97	51.473	ENSGMOG00000015674	lrrc47	95	49.466	Gadus_morhua
ENSCAFG00000019492	LRRC47	97	60.967	ENSGALG00000050995	LRRC47	96	62.321	Gallus_gallus
ENSCAFG00000019492	LRRC47	97	53.310	ENSGACG00000005550	lrrc47	99	53.310	Gasterosteus_aculeatus
ENSCAFG00000019492	LRRC47	100	62.438	ENSGAGG00000022584	LRRC47	95	62.653	Gopherus_agassizii
ENSCAFG00000019492	LRRC47	99	84.364	ENSGGOG00000015571	LRRC47	99	85.417	Gorilla_gorilla
ENSCAFG00000019492	LRRC47	99	79.422	ENSHGLG00000018278	LRRC47	95	80.348	Heterocephalus_glaber_female
ENSCAFG00000019492	LRRC47	69	75.743	ENSHGLG00100008507	LRRC47	100	75.743	Heterocephalus_glaber_male
ENSCAFG00000019492	LRRC47	97	53.621	ENSHCOG00000006348	lrrc47	97	54.181	Hippocampus_comes
ENSCAFG00000019492	LRRC47	99	82.788	ENSSTOG00000027559	LRRC47	96	83.036	Ictidomys_tridecemlineatus
ENSCAFG00000019492	LRRC47	98	83.160	ENSJJAG00000017474	Lrrc47	96	82.261	Jaculus_jaculus
ENSCAFG00000019492	LRRC47	97	52.696	ENSKMAG00000003414	lrrc47	99	52.522	Kryptolebias_marmoratus
ENSCAFG00000019492	LRRC47	99	82.534	ENSLAFG00000011657	LRRC47	99	83.681	Loxodonta_africana
ENSCAFG00000019492	LRRC47	99	59.455	ENSMFAG00000045730	LRRC47	88	93.467	Macaca_fascicularis
ENSCAFG00000019492	LRRC47	94	84.740	ENSMNEG00000042488	LRRC47	99	84.896	Macaca_nemestrina
ENSCAFG00000019492	LRRC47	76	80.044	ENSMLEG00000043735	LRRC47	91	79.823	Mandrillus_leucophaeus
ENSCAFG00000019492	LRRC47	94	80.036	ENSMAUG00000021337	Lrrc47	95	79.676	Mesocricetus_auratus
ENSCAFG00000019492	LRRC47	99	82.444	ENSMICG00000026816	LRRC47	99	82.783	Microcebus_murinus
ENSCAFG00000019492	LRRC47	99	80.034	ENSMOCG00000021279	Lrrc47	99	81.043	Microtus_ochrogaster
ENSCAFG00000019492	LRRC47	97	53.125	ENSMMOG00000017007	lrrc47	96	53.777	Mola_mola
ENSCAFG00000019492	LRRC47	98	72.617	ENSMODG00000006554	LRRC47	98	72.000	Monodelphis_domestica
ENSCAFG00000019492	LRRC47	94	80.755	MGP_CAROLIEiJ_G0026864	Lrrc47	98	80.696	Mus_caroli
ENSCAFG00000019492	LRRC47	94	80.935	ENSMUSG00000029028	Lrrc47	98	80.870	Mus_musculus
ENSCAFG00000019492	LRRC47	94	79.856	MGP_PahariEiJ_G0029212	Lrrc47	98	80.696	Mus_pahari
ENSCAFG00000019492	LRRC47	94	80.935	MGP_SPRETEiJ_G0027857	Lrrc47	98	80.870	Mus_spretus
ENSCAFG00000019492	LRRC47	64	89.683	ENSMPUG00000007321	LRRC47	75	89.683	Mustela_putorius_furo
ENSCAFG00000019492	LRRC47	94	80.396	ENSNGAG00000022153	Lrrc47	98	82.087	Nannospalax_galili
ENSCAFG00000019492	LRRC47	99	81.615	ENSNLEG00000008131	LRRC47	99	81.771	Nomascus_leucogenys
ENSCAFG00000019492	LRRC47	83	78.980	ENSODEG00000010882	LRRC47	93	78.776	Octodon_degus
ENSCAFG00000019492	LRRC47	94	55.296	ENSORLG00000002532	lrrc47	96	55.493	Oryzias_latipes
ENSCAFG00000019492	LRRC47	97	55.652	ENSORLG00020019601	lrrc47	96	55.856	Oryzias_latipes_hni
ENSCAFG00000019492	LRRC47	97	55.130	ENSORLG00015014040	lrrc47	96	55.315	Oryzias_latipes_hsok
ENSCAFG00000019492	LRRC47	97	55.304	ENSOMEG00000008989	lrrc47	96	55.315	Oryzias_melastigma
ENSCAFG00000019492	LRRC47	99	82.474	ENSOGAG00000001553	LRRC47	99	83.160	Otolemur_garnettii
ENSCAFG00000019492	LRRC47	98	81.565	ENSOARG00000015290	LRRC47	99	81.565	Ovis_aries
ENSCAFG00000019492	LRRC47	96	81.733	ENSPPAG00000036370	-	96	79.551	Pan_paniscus
ENSCAFG00000019492	LRRC47	98	89.965	ENSPPRG00000005261	LRRC47	98	90.087	Panthera_pardus
ENSCAFG00000019492	LRRC47	99	84.192	ENSPTRG00000000068	LRRC47	99	85.243	Pan_troglodytes
ENSCAFG00000019492	LRRC47	99	84.536	ENSPANG00000012437	LRRC47	99	85.069	Papio_anubis
ENSCAFG00000019492	LRRC47	64	66.842	ENSPSIG00000004196	LRRC47	100	66.316	Pelodiscus_sinensis
ENSCAFG00000019492	LRRC47	64	75.332	ENSPEMG00000021068	Lrrc47	100	75.597	Peromyscus_maniculatus_bairdii
ENSCAFG00000019492	LRRC47	97	75.261	ENSPCIG00000003638	LRRC47	95	76.122	Phascolarctos_cinereus
ENSCAFG00000019492	LRRC47	92	54.596	ENSPFOG00000000992	lrrc47	94	54.412	Poecilia_formosa
ENSCAFG00000019492	LRRC47	97	54.704	ENSPLAG00000008077	lrrc47	99	54.530	Poecilia_latipinna
ENSCAFG00000019492	LRRC47	97	55.035	ENSPMEG00000007367	lrrc47	99	54.878	Poecilia_mexicana
ENSCAFG00000019492	LRRC47	99	84.364	ENSPPYG00000001960	LRRC47	99	85.417	Pongo_abelii
ENSCAFG00000019492	LRRC47	94	82.554	ENSPCOG00000019161	LRRC47	99	83.854	Propithecus_coquereli
ENSCAFG00000019492	LRRC47	99	84.391	ENSPVAG00000009839	LRRC47	99	84.549	Pteropus_vampyrus
ENSCAFG00000019492	LRRC47	99	52.911	ENSPNAG00000017982	lrrc47	95	52.783	Pygocentrus_nattereri
ENSCAFG00000019492	LRRC47	99	79.725	ENSRNOG00000024796	Lrrc47	99	80.870	Rattus_norvegicus
ENSCAFG00000019492	LRRC47	99	84.708	ENSRBIG00000019437	LRRC47	99	85.243	Rhinopithecus_bieti
ENSCAFG00000019492	LRRC47	99	84.708	ENSRROG00000043182	LRRC47	99	85.243	Rhinopithecus_roxellana
ENSCAFG00000019492	LRRC47	90	79.622	ENSSBOG00000026334	LRRC47	97	79.412	Saimiri_boliviensis_boliviensis
ENSCAFG00000019492	LRRC47	97	61.407	ENSSHAG00000007360	LRRC47	95	61.837	Sarcophilus_harrisii
ENSCAFG00000019492	LRRC47	97	54.905	ENSSMAG00000009344	lrrc47	99	55.652	Scophthalmus_maximus
ENSCAFG00000019492	LRRC47	97	53.565	ENSSDUG00000014618	lrrc47	99	54.261	Seriola_dumerili
ENSCAFG00000019492	LRRC47	97	54.435	ENSSLDG00000018908	lrrc47	99	54.261	Seriola_lalandi_dorsalis
ENSCAFG00000019492	LRRC47	98	61.499	ENSSPUG00000010277	LRRC47	96	62.787	Sphenodon_punctatus
ENSCAFG00000019492	LRRC47	97	54.957	ENSSPAG00000005188	lrrc47	99	55.304	Stegastes_partitus
ENSCAFG00000019492	LRRC47	99	85.567	ENSSSCG00000039516	LRRC47	95	85.971	Sus_scrofa
ENSCAFG00000019492	LRRC47	69	63.971	ENSTGUG00000002737	LRRC47	99	62.500	Taeniopygia_guttata
ENSCAFG00000019492	LRRC47	97	53.136	ENSTRUG00000017696	lrrc47	95	53.069	Takifugu_rubripes
ENSCAFG00000019492	LRRC47	97	52.613	ENSTNIG00000010923	lrrc47	94	53.297	Tetraodon_nigroviridis
ENSCAFG00000019492	LRRC47	99	84.364	ENSTTRG00000011751	LRRC47	99	84.722	Tursiops_truncatus
ENSCAFG00000019492	LRRC47	87	92.593	ENSUAMG00000012080	LRRC47	97	92.593	Ursus_americanus
ENSCAFG00000019492	LRRC47	65	91.601	ENSUMAG00000010781	LRRC47	81	91.601	Ursus_maritimus
ENSCAFG00000019492	LRRC47	94	93.478	ENSVVUG00000027118	LRRC47	94	93.478	Vulpes_vulpes
ENSCAFG00000019492	LRRC47	98	58.763	ENSXETG00000006029	lrrc47	95	59.246	Xenopus_tropicalis
ENSCAFG00000019492	LRRC47	97	55.245	ENSXCOG00000002813	lrrc47	95	55.054	Xiphophorus_couchianus
ENSCAFG00000019492	LRRC47	97	54.704	ENSXMAG00000019386	lrrc47	99	54.530	Xiphophorus_maculatus