EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAFG00000019545 (Gene tree)
Gene ID: 489627
Gene Symbol: CHD5
Alias: -
Full Name: chromodomain helicase DNA binding protein 5
Gene Type: protein_coding
Species: Canis_familiaris
Status: putative
Strand: Minus strand
Length: 47893 bases
Position: chr5:60026537-60074429
Accession: 39203
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00000028919	ResIII	PF04851.15	3.1e-08	1	1
ENSCAFP00000036157	ResIII	PF04851.15	6e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00000031086	-	5817	XM_005620447	ENSCAFP00000028919	1812 (aa)	-	E2R1M3
ENSCAFT00000044104	-	3588	-	ENSCAFP00000036157	1195 (aa)	-	J9NRN3

Gene Model

Click here to download ENSCAFG00000019545's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00000019545's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAFG00000019545	CHD5	53	42.879	ENSCAFG00000010998	CHD2	50	43.014
ENSCAFG00000019545	CHD5	99	69.931	ENSCAFG00000016859	CHD3	91	69.830
ENSCAFG00000019545	CHD5	88	76.071	ENSCAFG00000014929	CHD4	92	72.421

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00000019545	CHD5	100	97.138	ENSG00000116254	CHD5	96	97.547	Homo_sapiens
ENSCAFG00000019545	CHD5	99	98.399	ENSAMEG00000009880	CHD5	94	98.399	Ailuropoda_melanoleuca
ENSCAFG00000019545	CHD5	99	78.230	ENSACIG00000012582	chd5	97	77.736	Amphilophus_citrinellus
ENSCAFG00000019545	CHD5	99	78.942	ENSAOCG00000020356	chd5	90	78.595	Amphiprion_ocellaris
ENSCAFG00000019545	CHD5	98	81.783	ENSAPLG00000015475	CHD5	94	82.057	Anas_platyrhynchos
ENSCAFG00000019545	CHD5	100	84.582	ENSACAG00000002441	CHD5	92	84.481	Anolis_carolinensis
ENSCAFG00000019545	CHD5	93	96.925	ENSANAG00000001078	CHD5	91	96.925	Aotus_nancymaae
ENSCAFG00000019545	CHD5	99	74.576	ENSACLG00000003012	chd5	96	74.467	Astatotilapia_calliptera
ENSCAFG00000019545	CHD5	93	80.313	ENSAMXG00000008921	chd5	98	79.873	Astyanax_mexicanus
ENSCAFG00000019545	CHD5	100	97.690	ENSBTAG00000040477	CHD5	100	97.690	Bos_taurus
ENSCAFG00000019545	CHD5	100	97.138	ENSCJAG00000000101	CHD5	93	97.138	Callithrix_jacchus
ENSCAFG00000019545	CHD5	99	100.000	ENSCAFG00020008689	CHD5	90	100.000	Canis_lupus_dingo
ENSCAFG00000019545	CHD5	99	95.564	ENSCHIG00000015027	CHD5	91	95.564	Capra_hircus
ENSCAFG00000019545	CHD5	99	91.594	ENSTSYG00000033991	CHD5	93	91.976	Carlito_syrichta
ENSCAFG00000019545	CHD5	100	95.817	ENSCAPG00000009294	CHD5	94	95.817	Cavia_aperea
ENSCAFG00000019545	CHD5	100	95.872	ENSCPOG00000025080	CHD5	94	95.872	Cavia_porcellus
ENSCAFG00000019545	CHD5	100	96.973	ENSCCAG00000024756	CHD5	93	96.973	Cebus_capucinus
ENSCAFG00000019545	CHD5	100	97.303	ENSCATG00000043011	CHD5	94	97.303	Cercocebus_atys
ENSCAFG00000019545	CHD5	100	96.258	ENSCLAG00000010589	CHD5	94	96.258	Chinchilla_lanigera
ENSCAFG00000019545	CHD5	100	97.248	ENSCSAG00000000733	CHD5	93	97.248	Chlorocebus_sabaeus
ENSCAFG00000019545	CHD5	100	90.839	ENSCPBG00000019363	CHD5	100	90.730	Chrysemys_picta_bellii
ENSCAFG00000019545	CHD5	100	97.193	ENSCANG00000032302	CHD5	93	97.193	Colobus_angolensis_palliatus
ENSCAFG00000019545	CHD5	89	96.887	ENSCGRG00001011042	Chd5	100	96.887	Cricetulus_griseus_chok1gshd
ENSCAFG00000019545	CHD5	100	95.542	ENSCGRG00000011341	Chd5	94	95.542	Cricetulus_griseus_crigri
ENSCAFG00000019545	CHD5	99	77.892	ENSDARG00000105083	chd5	97	79.605	Danio_rerio
ENSCAFG00000019545	CHD5	98	67.493	ENSDARG00000025789	chd4b	92	68.194	Danio_rerio
ENSCAFG00000019545	CHD5	100	91.800	ENSDNOG00000046342	CHD5	93	91.800	Dasypus_novemcinctus
ENSCAFG00000019545	CHD5	100	96.207	ENSDORG00000005923	Chd5	94	96.207	Dipodomys_ordii
ENSCAFG00000019545	CHD5	99	95.978	ENSEASG00005021464	CHD5	91	95.974	Equus_asinus_asinus
ENSCAFG00000019545	CHD5	99	95.702	ENSECAG00000025043	CHD5	95	97.610	Equus_caballus
ENSCAFG00000019545	CHD5	75	99.070	ENSEEUG00000002772	CHD5	71	99.070	Erinaceus_europaeus
ENSCAFG00000019545	CHD5	99	76.564	ENSELUG00000010742	chd5	94	76.428	Esox_lucius
ENSCAFG00000019545	CHD5	100	98.951	ENSFCAG00000006319	CHD5	93	98.951	Felis_catus
ENSCAFG00000019545	CHD5	99	89.254	ENSFALG00000009740	CHD5	93	89.145	Ficedula_albicollis
ENSCAFG00000019545	CHD5	99	95.702	ENSFDAG00000012881	CHD5	92	95.447	Fukomys_damarensis
ENSCAFG00000019545	CHD5	100	89.188	ENSGALG00000000747	CHD5	93	89.188	Gallus_gallus
ENSCAFG00000019545	CHD5	85	82.532	ENSGACG00000004389	chd5	92	82.609	Gasterosteus_aculeatus
ENSCAFG00000019545	CHD5	100	88.103	ENSGAGG00000001590	CHD5	96	95.610	Gopherus_agassizii
ENSCAFG00000019545	CHD5	100	97.083	ENSGGOG00000000708	CHD5	94	97.083	Gorilla_gorilla
ENSCAFG00000019545	CHD5	99	76.125	ENSHBUG00000013453	chd5	96	76.070	Haplochromis_burtoni
ENSCAFG00000019545	CHD5	100	95.982	ENSHGLG00000018184	CHD5	96	95.982	Heterocephalus_glaber_female
ENSCAFG00000019545	CHD5	100	88.846	ENSHGLG00100013261	CHD5	91	89.133	Heterocephalus_glaber_male
ENSCAFG00000019545	CHD5	99	78.325	ENSIPUG00000005446	chd5	97	77.839	Ictalurus_punctatus
ENSCAFG00000019545	CHD5	100	96.808	ENSSTOG00000002778	CHD5	93	95.950	Ictidomys_tridecemlineatus
ENSCAFG00000019545	CHD5	100	95.927	ENSJJAG00000019072	Chd5	93	95.927	Jaculus_jaculus
ENSCAFG00000019545	CHD5	60	89.552	ENSLACG00000022233	-	99	88.227	Latimeria_chalumnae
ENSCAFG00000019545	CHD5	99	81.783	ENSLOCG00000004944	chd5	91	82.047	Lepisosteus_oculatus
ENSCAFG00000019545	CHD5	99	97.080	ENSLAFG00000006348	CHD5	94	97.080	Loxodonta_africana
ENSCAFG00000019545	CHD5	100	97.248	ENSMFAG00000033993	CHD5	100	97.248	Macaca_fascicularis
ENSCAFG00000019545	CHD5	100	97.138	ENSMMUG00000016838	CHD5	93	97.138	Macaca_mulatta
ENSCAFG00000019545	CHD5	100	97.248	ENSMNEG00000040044	CHD5	93	97.248	Macaca_nemestrina
ENSCAFG00000019545	CHD5	100	93.597	ENSMLEG00000039166	CHD5	94	93.597	Mandrillus_leucophaeus
ENSCAFG00000019545	CHD5	99	74.416	ENSMZEG00005000841	chd5	96	74.388	Maylandia_zebra
ENSCAFG00000019545	CHD5	99	89.352	ENSMGAG00000001055	CHD5	93	89.243	Meleagris_gallopavo
ENSCAFG00000019545	CHD5	100	93.433	ENSMICG00000017862	CHD5	93	93.377	Microcebus_murinus
ENSCAFG00000019545	CHD5	100	95.487	ENSMOCG00000011049	Chd5	93	95.762	Microtus_ochrogaster
ENSCAFG00000019545	CHD5	78	95.143	ENSMODG00000006294	CHD5	72	94.573	Monodelphis_domestica
ENSCAFG00000019545	CHD5	99	78.026	ENSMALG00000002831	chd5	95	77.578	Monopterus_albus
ENSCAFG00000019545	CHD5	100	95.707	MGP_CAROLIEiJ_G0026857	Chd5	93	95.707	Mus_caroli
ENSCAFG00000019545	CHD5	100	95.597	ENSMUSG00000005045	Chd5	93	95.597	Mus_musculus
ENSCAFG00000019545	CHD5	100	95.542	MGP_PahariEiJ_G0029205	Chd5	93	95.542	Mus_pahari
ENSCAFG00000019545	CHD5	100	95.597	MGP_SPRETEiJ_G0027850	Chd5	93	95.597	Mus_spretus
ENSCAFG00000019545	CHD5	100	94.459	ENSMPUG00000007122	CHD5	94	94.459	Mustela_putorius_furo
ENSCAFG00000019545	CHD5	99	95.207	ENSNGAG00000019812	Chd5	90	95.207	Nannospalax_galili
ENSCAFG00000019545	CHD5	100	94.717	ENSNLEG00000010320	CHD5	96	94.430	Nomascus_leucogenys
ENSCAFG00000019545	CHD5	87	92.157	ENSOPRG00000004304	CHD5	81	92.053	Ochotona_princeps
ENSCAFG00000019545	CHD5	100	95.762	ENSODEG00000010262	CHD5	94	95.762	Octodon_degus
ENSCAFG00000019545	CHD5	99	77.425	ENSONIG00000000619	chd5	93	77.234	Oreochromis_niloticus
ENSCAFG00000019545	CHD5	99	71.788	ENSOANG00000001819	CHD5	95	71.803	Ornithorhynchus_anatinus
ENSCAFG00000019545	CHD5	99	96.971	ENSOGAG00000005703	CHD5	93	96.971	Otolemur_garnettii
ENSCAFG00000019545	CHD5	98	96.571	ENSOARG00000013425	CHD5	92	96.571	Ovis_aries
ENSCAFG00000019545	CHD5	100	97.140	ENSPPAG00000034048	CHD5	94	97.140	Pan_paniscus
ENSCAFG00000019545	CHD5	100	98.344	ENSPPRG00000009453	CHD5	93	98.344	Panthera_pardus
ENSCAFG00000019545	CHD5	100	90.450	ENSPTIG00000013926	CHD5	94	90.505	Panthera_tigris_altaica
ENSCAFG00000019545	CHD5	100	97.140	ENSPTRG00000000075	CHD5	93	97.140	Pan_troglodytes
ENSCAFG00000019545	CHD5	100	97.248	ENSPANG00000006765	CHD5	93	97.248	Papio_anubis
ENSCAFG00000019545	CHD5	98	79.146	ENSPKIG00000004282	chd5	94	78.924	Paramormyrops_kingsleyae
ENSCAFG00000019545	CHD5	99	83.352	ENSPSIG00000006414	CHD5	97	83.680	Pelodiscus_sinensis
ENSCAFG00000019545	CHD5	93	95.871	ENSPEMG00000014799	Chd5	92	97.463	Peromyscus_maniculatus_bairdii
ENSCAFG00000019545	CHD5	100	92.540	ENSPCIG00000028310	CHD5	92	92.649	Phascolarctos_cinereus
ENSCAFG00000019545	CHD5	99	75.996	ENSPLAG00000005343	chd5	93	86.905	Poecilia_latipinna
ENSCAFG00000019545	CHD5	100	93.709	ENSPPYG00000001952	CHD5	94	93.709	Pongo_abelii
ENSCAFG00000019545	CHD5	100	97.413	ENSPCOG00000022930	CHD5	93	97.413	Propithecus_coquereli
ENSCAFG00000019545	CHD5	99	78.244	ENSPNYG00000003183	chd5	96	77.996	Pundamilia_nyererei
ENSCAFG00000019545	CHD5	100	95.762	ENSRNOG00000011268	Chd5	94	95.710	Rattus_norvegicus
ENSCAFG00000019545	CHD5	100	97.872	ENSRBIG00000032140	CHD5	95	96.970	Rhinopithecus_bieti
ENSCAFG00000019545	CHD5	100	96.918	ENSRROG00000041146	CHD5	93	96.918	Rhinopithecus_roxellana
ENSCAFG00000019545	CHD5	100	93.451	ENSSBOG00000001955	CHD5	100	97.389	Saimiri_boliviensis_boliviensis
ENSCAFG00000019545	CHD5	99	86.630	ENSSHAG00000018641	CHD5	96	86.685	Sarcophilus_harrisii
ENSCAFG00000019545	CHD5	99	78.755	ENSSFOG00015006296	chd5	90	83.214	Scleropages_formosus
ENSCAFG00000019545	CHD5	99	79.203	ENSSDUG00000017526	chd5	95	78.306	Seriola_dumerili
ENSCAFG00000019545	CHD5	99	81.216	ENSSPUG00000010622	CHD5	94	80.981	Sphenodon_punctatus
ENSCAFG00000019545	CHD5	100	97.744	ENSSSCG00000003366	CHD5	100	97.744	Sus_scrofa
ENSCAFG00000019545	CHD5	97	83.149	ENSTGUG00000002634	-	96	83.278	Taeniopygia_guttata
ENSCAFG00000019545	CHD5	85	81.134	ENSTNIG00000004346	chd5	99	81.349	Tetraodon_nigroviridis
ENSCAFG00000019545	CHD5	100	95.212	ENSTTRG00000010468	CHD5	93	95.212	Tursiops_truncatus
ENSCAFG00000019545	CHD5	99	99.282	ENSUAMG00000024509	CHD5	100	95.059	Ursus_americanus
ENSCAFG00000019545	CHD5	99	93.867	ENSUMAG00000024173	CHD5	96	92.416	Ursus_maritimus
ENSCAFG00000019545	CHD5	99	98.785	ENSVVUG00000026480	CHD5	92	98.784	Vulpes_vulpes
ENSCAFG00000019545	CHD5	99	80.315	ENSXETG00000002904	chd5	96	79.838	Xenopus_tropicalis
ENSCAFG00000019545	CHD5	85	81.195	ENSXCOG00000014202	chd5	94	83.871	Xiphophorus_couchianus