EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCAFG00000019546 (Gene tree)
Gene ID: 611859
Gene Symbol: POLR2E
Alias: -
Full Name: RNA polymerase II subunit E
Gene Type: protein_coding
Species: Canis_familiaris
Status: putative
Strand: Plus strand
Length: 3141 bases
Position: chr20:57649930-57653070
Accession: 44796
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00000028908	RNA_pol_Rpb5_N	PF03871.14	6.9e-35	1	1
ENSCAFP00000028908	RNA_pol_Rpb5_C	PF01191.19	1.2e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00000031075	-	630	XM_849548	ENSCAFP00000028908	210 (aa)	-	F6X571

Gene Model

Click here to download ENSCAFG00000019546's gene model file

Pathways

Pathway ID	Pathway Name	Source
cfa03020	RNA polymerase	KEGG
cfa04623	Cytosolic DNA-sensing pathway	KEGG
cfa05016	Huntington disease	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00000019546's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00000019546	POLR2E	100	96.190	ENSG00000099817	POLR2E	100	96.190	Homo_sapiens
ENSCAFG00000019546	POLR2E	100	92.857	ENSAPOG00000002935	polr2eb	100	92.857	Acanthochromis_polyacanthus
ENSCAFG00000019546	POLR2E	100	96.667	ENSAMEG00000003159	POLR2E	100	96.667	Ailuropoda_melanoleuca
ENSCAFG00000019546	POLR2E	100	80.476	ENSACIG00000024371	polr2eb	100	80.476	Amphilophus_citrinellus
ENSCAFG00000019546	POLR2E	100	92.857	ENSAOCG00000018166	polr2eb	100	92.857	Amphiprion_ocellaris
ENSCAFG00000019546	POLR2E	100	92.857	ENSAPEG00000009000	polr2eb	100	92.857	Amphiprion_percula
ENSCAFG00000019546	POLR2E	100	92.857	ENSATEG00000023760	polr2eb	100	92.857	Anabas_testudineus
ENSCAFG00000019546	POLR2E	100	96.667	ENSANAG00000038488	POLR2E	100	96.667	Aotus_nancymaae
ENSCAFG00000019546	POLR2E	100	93.333	ENSACLG00000005254	polr2eb	100	93.333	Astatotilapia_calliptera
ENSCAFG00000019546	POLR2E	100	92.857	ENSAMXG00000018915	POLR2E	100	92.857	Astyanax_mexicanus
ENSCAFG00000019546	POLR2E	100	96.667	ENSBTAG00000020776	POLR2E	100	96.667	Bos_taurus
ENSCAFG00000019546	POLR2E	99	75.481	WBGene00019246	rpb-5	99	75.481	Caenorhabditis_elegans
ENSCAFG00000019546	POLR2E	67	90.714	ENSCJAG00000007666	-	77	90.714	Callithrix_jacchus
ENSCAFG00000019546	POLR2E	100	96.667	ENSCAFG00020017111	POLR2E	100	96.667	Canis_lupus_dingo
ENSCAFG00000019546	POLR2E	100	96.667	ENSCHIG00000014151	POLR2E	100	96.667	Capra_hircus
ENSCAFG00000019546	POLR2E	100	81.604	ENSTSYG00000026377	POLR2E	100	81.604	Carlito_syrichta
ENSCAFG00000019546	POLR2E	91	96.354	ENSCAPG00000010843	POLR2E	93	96.354	Cavia_aperea
ENSCAFG00000019546	POLR2E	100	96.667	ENSCPOG00000001542	POLR2E	100	96.667	Cavia_porcellus
ENSCAFG00000019546	POLR2E	100	96.667	ENSCCAG00000025658	POLR2E	100	96.667	Cebus_capucinus
ENSCAFG00000019546	POLR2E	100	96.667	ENSCATG00000008926	POLR2E	100	96.667	Cercocebus_atys
ENSCAFG00000019546	POLR2E	100	96.190	ENSCLAG00000014874	-	100	96.190	Chinchilla_lanigera
ENSCAFG00000019546	POLR2E	98	74.146	ENSCLAG00000009238	-	100	74.146	Chinchilla_lanigera
ENSCAFG00000019546	POLR2E	100	96.667	ENSCSAG00000012336	POLR2E	100	96.667	Chlorocebus_sabaeus
ENSCAFG00000019546	POLR2E	100	96.190	ENSCPBG00000009702	POLR2E	100	96.190	Chrysemys_picta_bellii
ENSCAFG00000019546	POLR2E	100	83.333	ENSCING00000024933	-	99	83.333	Ciona_intestinalis
ENSCAFG00000019546	POLR2E	100	96.667	ENSCANG00000025560	POLR2E	100	96.667	Colobus_angolensis_palliatus
ENSCAFG00000019546	POLR2E	100	95.714	ENSCGRG00001022927	Polr2e	100	95.714	Cricetulus_griseus_chok1gshd
ENSCAFG00000019546	POLR2E	100	89.302	ENSCGRG00000016441	Polr2e	100	89.302	Cricetulus_griseus_crigri
ENSCAFG00000019546	POLR2E	100	91.905	ENSCSEG00000007107	polr2eb	92	91.905	Cynoglossus_semilaevis
ENSCAFG00000019546	POLR2E	100	92.857	ENSCVAG00000019940	polr2eb	100	92.857	Cyprinodon_variegatus
ENSCAFG00000019546	POLR2E	100	91.905	ENSDARG00000026183	polr2eb	100	91.905	Danio_rerio
ENSCAFG00000019546	POLR2E	90	96.316	ENSDNOG00000044994	POLR2E	84	96.316	Dasypus_novemcinctus
ENSCAFG00000019546	POLR2E	100	96.667	ENSDORG00000001154	Polr2e	100	96.667	Dipodomys_ordii
ENSCAFG00000019546	POLR2E	99	82.775	FBgn0033571	Rpb5	99	82.775	Drosophila_melanogaster
ENSCAFG00000019546	POLR2E	75	91.720	ENSEBUG00000010159	-	76	91.720	Eptatretus_burgeri
ENSCAFG00000019546	POLR2E	69	88.966	ENSEASG00005021615	POLR2E	67	83.333	Equus_asinus_asinus
ENSCAFG00000019546	POLR2E	91	95.288	ENSECAG00000011124	POLR2E	100	83.810	Equus_caballus
ENSCAFG00000019546	POLR2E	100	91.429	ENSELUG00000005815	POLR2E	100	91.429	Esox_lucius
ENSCAFG00000019546	POLR2E	100	90.476	ENSELUG00000020646	polr2e	100	90.476	Esox_lucius
ENSCAFG00000019546	POLR2E	100	96.190	ENSFCAG00000007318	POLR2E	100	96.190	Felis_catus
ENSCAFG00000019546	POLR2E	91	95.833	ENSFALG00000013986	POLR2E	99	95.833	Ficedula_albicollis
ENSCAFG00000019546	POLR2E	100	96.667	ENSFDAG00000014539	POLR2E	100	96.667	Fukomys_damarensis
ENSCAFG00000019546	POLR2E	100	92.857	ENSFHEG00000022398	polr2eb	100	92.857	Fundulus_heteroclitus
ENSCAFG00000019546	POLR2E	100	91.429	ENSGMOG00000007615	polr2eb	100	91.429	Gadus_morhua
ENSCAFG00000019546	POLR2E	100	96.190	ENSGALG00000002591	POLR2E	100	96.190	Gallus_gallus
ENSCAFG00000019546	POLR2E	100	93.333	ENSGAFG00000005087	polr2eb	100	93.333	Gambusia_affinis
ENSCAFG00000019546	POLR2E	100	91.429	ENSGACG00000013247	polr2eb	100	91.429	Gasterosteus_aculeatus
ENSCAFG00000019546	POLR2E	100	96.190	ENSGAGG00000008356	POLR2E	100	96.190	Gopherus_agassizii
ENSCAFG00000019546	POLR2E	100	96.667	ENSGGOG00000011267	POLR2E	100	96.667	Gorilla_gorilla
ENSCAFG00000019546	POLR2E	68	85.915	ENSHBUG00000011099	polr2eb	100	85.915	Haplochromis_burtoni
ENSCAFG00000019546	POLR2E	100	95.714	ENSHGLG00000013330	POLR2E	100	95.714	Heterocephalus_glaber_female
ENSCAFG00000019546	POLR2E	100	95.714	ENSHGLG00100011014	POLR2E	100	95.714	Heterocephalus_glaber_male
ENSCAFG00000019546	POLR2E	53	91.964	ENSHCOG00000012099	-	88	91.964	Hippocampus_comes
ENSCAFG00000019546	POLR2E	100	91.429	ENSHCOG00000000906	polr2eb	100	91.429	Hippocampus_comes
ENSCAFG00000019546	POLR2E	100	92.857	ENSIPUG00000019801	polr2e	100	92.857	Ictalurus_punctatus
ENSCAFG00000019546	POLR2E	100	96.667	ENSSTOG00000002853	POLR2E	100	96.667	Ictidomys_tridecemlineatus
ENSCAFG00000019546	POLR2E	77	81.366	ENSJJAG00000015812	-	100	81.366	Jaculus_jaculus
ENSCAFG00000019546	POLR2E	100	95.714	ENSJJAG00000016595	-	100	95.714	Jaculus_jaculus
ENSCAFG00000019546	POLR2E	100	76.667	ENSJJAG00000003145	-	100	76.667	Jaculus_jaculus
ENSCAFG00000019546	POLR2E	100	92.857	ENSKMAG00000005954	polr2eb	100	92.857	Kryptolebias_marmoratus
ENSCAFG00000019546	POLR2E	100	92.857	ENSLBEG00000024802	polr2eb	100	92.857	Labrus_bergylta
ENSCAFG00000019546	POLR2E	100	92.857	ENSLACG00000013686	POLR2E	100	92.857	Latimeria_chalumnae
ENSCAFG00000019546	POLR2E	77	96.914	ENSLOCG00000004599	POLR2E	100	96.914	Lepisosteus_oculatus
ENSCAFG00000019546	POLR2E	100	76.887	ENSLAFG00000025587	POLR2E	100	76.887	Loxodonta_africana
ENSCAFG00000019546	POLR2E	100	96.667	ENSMFAG00000002884	POLR2E	100	96.667	Macaca_fascicularis
ENSCAFG00000019546	POLR2E	100	96.667	ENSMMUG00000013927	POLR2E	100	96.667	Macaca_mulatta
ENSCAFG00000019546	POLR2E	100	64.455	ENSMNEG00000033452	-	100	64.455	Macaca_nemestrina
ENSCAFG00000019546	POLR2E	100	96.667	ENSMNEG00000034046	-	100	96.667	Macaca_nemestrina
ENSCAFG00000019546	POLR2E	92	78.238	ENSMLEG00000012405	POLR2E	94	78.238	Mandrillus_leucophaeus
ENSCAFG00000019546	POLR2E	100	92.857	ENSMAMG00000018703	polr2eb	100	92.857	Mastacembelus_armatus
ENSCAFG00000019546	POLR2E	90	92.632	ENSMZEG00005010796	polr2eb	96	92.632	Maylandia_zebra
ENSCAFG00000019546	POLR2E	100	94.787	ENSMGAG00000003769	POLR2E	100	94.787	Meleagris_gallopavo
ENSCAFG00000019546	POLR2E	100	64.762	ENSMAUG00000011003	-	100	64.762	Mesocricetus_auratus
ENSCAFG00000019546	POLR2E	92	94.819	ENSMAUG00000010125	-	100	95.288	Mesocricetus_auratus
ENSCAFG00000019546	POLR2E	100	96.667	ENSMICG00000013063	POLR2E	100	96.667	Microcebus_murinus
ENSCAFG00000019546	POLR2E	100	95.714	ENSMOCG00000013414	Polr2e	100	95.714	Microtus_ochrogaster
ENSCAFG00000019546	POLR2E	91	83.246	ENSMMOG00000001167	polr2eb	88	83.246	Mola_mola
ENSCAFG00000019546	POLR2E	100	78.571	ENSMMOG00000001161	polr2eb	100	78.571	Mola_mola
ENSCAFG00000019546	POLR2E	100	96.190	ENSMODG00000005494	POLR2E	100	96.190	Monodelphis_domestica
ENSCAFG00000019546	POLR2E	100	93.333	ENSMALG00000021888	polr2eb	100	93.333	Monopterus_albus
ENSCAFG00000019546	POLR2E	100	95.714	MGP_CAROLIEiJ_G0015561	Polr2e	100	95.714	Mus_caroli
ENSCAFG00000019546	POLR2E	100	95.714	ENSMUSG00000004667	Polr2e	100	95.714	Mus_musculus
ENSCAFG00000019546	POLR2E	100	95.714	MGP_PahariEiJ_G0030974	Polr2e	100	95.714	Mus_pahari
ENSCAFG00000019546	POLR2E	100	95.714	MGP_SPRETEiJ_G0016379	Polr2e	100	95.714	Mus_spretus
ENSCAFG00000019546	POLR2E	100	95.714	ENSMPUG00000008953	POLR2E	100	95.714	Mustela_putorius_furo
ENSCAFG00000019546	POLR2E	100	96.667	ENSMLUG00000013193	POLR2E	100	96.667	Myotis_lucifugus
ENSCAFG00000019546	POLR2E	66	94.203	ENSMLUG00000006376	-	100	82.716	Myotis_lucifugus
ENSCAFG00000019546	POLR2E	100	95.714	ENSNGAG00000001147	Polr2e	100	95.714	Nannospalax_galili
ENSCAFG00000019546	POLR2E	84	72.881	ENSNGAG00000017344	-	94	72.881	Nannospalax_galili
ENSCAFG00000019546	POLR2E	100	80.476	ENSNBRG00000022772	polr2eb	100	80.476	Neolamprologus_brichardi
ENSCAFG00000019546	POLR2E	100	74.762	ENSNLEG00000031364	-	100	74.762	Nomascus_leucogenys
ENSCAFG00000019546	POLR2E	100	92.891	ENSNLEG00000001207	-	100	92.891	Nomascus_leucogenys
ENSCAFG00000019546	POLR2E	100	83.810	ENSOPRG00000008331	POLR2E	100	83.810	Ochotona_princeps
ENSCAFG00000019546	POLR2E	100	69.524	ENSODEG00000011490	-	100	69.524	Octodon_degus
ENSCAFG00000019546	POLR2E	100	96.667	ENSODEG00000013230	-	100	96.667	Octodon_degus
ENSCAFG00000019546	POLR2E	88	87.500	ENSODEG00000007985	-	99	87.500	Octodon_degus
ENSCAFG00000019546	POLR2E	100	92.857	ENSONIG00000002519	polr2eb	100	92.857	Oreochromis_niloticus
ENSCAFG00000019546	POLR2E	100	93.333	ENSORLG00000015346	polr2eb	100	93.333	Oryzias_latipes
ENSCAFG00000019546	POLR2E	100	93.333	ENSORLG00020020700	polr2e	100	93.333	Oryzias_latipes_hni
ENSCAFG00000019546	POLR2E	100	93.333	ENSORLG00015016842	polr2e	100	93.333	Oryzias_latipes_hsok
ENSCAFG00000019546	POLR2E	100	92.857	ENSOMEG00000002709	polr2eb	100	92.857	Oryzias_melastigma
ENSCAFG00000019546	POLR2E	100	96.667	ENSOGAG00000012311	POLR2E	100	96.667	Otolemur_garnettii
ENSCAFG00000019546	POLR2E	100	96.667	ENSOARG00000010994	POLR2E	100	96.667	Ovis_aries
ENSCAFG00000019546	POLR2E	91	96.335	ENSPPAG00000003145	POLR2E	100	96.335	Pan_paniscus
ENSCAFG00000019546	POLR2E	100	96.190	ENSPPRG00000000777	POLR2E	100	96.190	Panthera_pardus
ENSCAFG00000019546	POLR2E	91	76.562	ENSPTIG00000012237	POLR2E	98	94.079	Panthera_tigris_altaica
ENSCAFG00000019546	POLR2E	100	96.667	ENSPTRG00000010183	POLR2E	100	96.667	Pan_troglodytes
ENSCAFG00000019546	POLR2E	100	96.667	ENSPANG00000018011	POLR2E	100	96.667	Papio_anubis
ENSCAFG00000019546	POLR2E	100	91.905	ENSPKIG00000024123	POLR2E	100	91.905	Paramormyrops_kingsleyae
ENSCAFG00000019546	POLR2E	100	91.905	ENSPKIG00000009607	POLR2E	100	91.905	Paramormyrops_kingsleyae
ENSCAFG00000019546	POLR2E	98	92.195	ENSPSIG00000002870	POLR2E	99	92.195	Pelodiscus_sinensis
ENSCAFG00000019546	POLR2E	100	80.000	ENSPMGG00000014354	polr2eb	100	80.000	Periophthalmus_magnuspinnatus
ENSCAFG00000019546	POLR2E	100	95.714	ENSPEMG00000023261	Polr2e	100	95.714	Peromyscus_maniculatus_bairdii
ENSCAFG00000019546	POLR2E	88	98.370	ENSPCIG00000007312	POLR2E	73	98.370	Phascolarctos_cinereus
ENSCAFG00000019546	POLR2E	100	93.333	ENSPFOG00000005734	polr2eb	100	93.333	Poecilia_formosa
ENSCAFG00000019546	POLR2E	100	93.333	ENSPLAG00000014496	polr2eb	100	93.333	Poecilia_latipinna
ENSCAFG00000019546	POLR2E	100	93.333	ENSPMEG00000008053	polr2eb	100	93.333	Poecilia_mexicana
ENSCAFG00000019546	POLR2E	100	93.333	ENSPREG00000006489	polr2eb	100	93.333	Poecilia_reticulata
ENSCAFG00000019546	POLR2E	100	89.100	ENSPPYG00000009305	POLR2E	100	89.100	Pongo_abelii
ENSCAFG00000019546	POLR2E	50	98.113	ENSPCAG00000016605	POLR2E	95	98.113	Procavia_capensis
ENSCAFG00000019546	POLR2E	100	96.667	ENSPCOG00000014491	POLR2E	100	96.667	Propithecus_coquereli
ENSCAFG00000019546	POLR2E	65	100.000	ENSPVAG00000007718	-	65	100.000	Pteropus_vampyrus
ENSCAFG00000019546	POLR2E	90	92.632	ENSPNYG00000019797	polr2eb	96	92.632	Pundamilia_nyererei
ENSCAFG00000019546	POLR2E	100	92.381	ENSPNAG00000026263	POLR2E	100	92.381	Pygocentrus_nattereri
ENSCAFG00000019546	POLR2E	100	95.714	ENSRNOG00000013545	Polr2e	100	95.714	Rattus_norvegicus
ENSCAFG00000019546	POLR2E	100	96.667	ENSRBIG00000028726	-	100	96.667	Rhinopithecus_bieti
ENSCAFG00000019546	POLR2E	100	72.038	ENSRBIG00000027259	-	100	72.038	Rhinopithecus_bieti
ENSCAFG00000019546	POLR2E	100	96.667	ENSRROG00000043763	POLR2E	100	96.667	Rhinopithecus_roxellana
ENSCAFG00000019546	POLR2E	99	41.743	YBR154C	RPB5	98	41.743	Saccharomyces_cerevisiae
ENSCAFG00000019546	POLR2E	100	96.667	ENSSBOG00000027241	POLR2E	100	96.667	Saimiri_boliviensis_boliviensis
ENSCAFG00000019546	POLR2E	100	96.190	ENSSHAG00000010690	POLR2E	100	96.190	Sarcophilus_harrisii
ENSCAFG00000019546	POLR2E	100	92.857	ENSSFOG00015006073	polr2e	100	92.857	Scleropages_formosus
ENSCAFG00000019546	POLR2E	100	92.857	ENSSMAG00000012782	polr2eb	100	92.857	Scophthalmus_maximus
ENSCAFG00000019546	POLR2E	100	92.857	ENSSDUG00000003352	polr2eb	100	92.857	Seriola_dumerili
ENSCAFG00000019546	POLR2E	100	92.857	ENSSLDG00000004965	polr2eb	100	92.857	Seriola_lalandi_dorsalis
ENSCAFG00000019546	POLR2E	100	94.762	ENSSPUG00000006114	POLR2E	100	94.762	Sphenodon_punctatus
ENSCAFG00000019546	POLR2E	100	92.857	ENSSPAG00000017556	polr2eb	100	92.857	Stegastes_partitus
ENSCAFG00000019546	POLR2E	100	96.667	ENSSSCG00000021472	POLR2E	100	96.667	Sus_scrofa
ENSCAFG00000019546	POLR2E	66	90.000	ENSTGUG00000000922	POLR2E	99	90.000	Taeniopygia_guttata
ENSCAFG00000019546	POLR2E	95	88.945	ENSTRUG00000018238	polr2eb	100	80.000	Takifugu_rubripes
ENSCAFG00000019546	POLR2E	100	92.857	ENSTNIG00000013187	polr2eb	100	92.857	Tetraodon_nigroviridis
ENSCAFG00000019546	POLR2E	100	96.190	ENSTTRG00000001484	POLR2E	100	96.190	Tursiops_truncatus
ENSCAFG00000019546	POLR2E	92	93.299	ENSUAMG00000009166	POLR2E	100	83.333	Ursus_americanus
ENSCAFG00000019546	POLR2E	100	96.667	ENSVVUG00000022818	POLR2E	54	96.667	Vulpes_vulpes
ENSCAFG00000019546	POLR2E	100	94.762	ENSXETG00000003291	polr2e	100	94.762	Xenopus_tropicalis
ENSCAFG00000019546	POLR2E	100	80.476	ENSXCOG00000009197	polr2eb	100	80.476	Xiphophorus_couchianus
ENSCAFG00000019546	POLR2E	100	93.333	ENSXMAG00000026495	polr2eb	100	93.333	Xiphophorus_maculatus