EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAFG00000019620 (Gene tree)
Gene ID: 492263
Gene Symbol: -
Alias: -
Full Name: dyskerin pseudouridine synthase 1
Gene Type: protein_coding
Species: Canis_familiaris
Status: putative
Strand: Plus strand
Length: 12402 bases
Position: chrX:122838762-122851163
Accession: 492263
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00000029020	TruB_N	PF01509.18	1.5e-21	1	1
ENSCAFP00000029020	PUA	PF01472.20	1.1e-18	1	1
ENSCAFP00000029020	DKCLD	PF08068.12	1.1e-31	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00000031188	-	2727	XM_005642041	ENSCAFP00000029020	517 (aa)	XP_549382	F6XRK3

Gene Model

Click here to download ENSCAFG00000019620's gene model file

Pathways

Pathway ID	Pathway Name	Source
cfa03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00000019620's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAFG00000019620	-	97	84.032	ENSCAFG00000009311	-	97	84.064

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00000019620	-	97	90.711	ENSG00000130826	DKC1	99	98.568	Homo_sapiens
ENSCAFG00000019620	-	77	85.750	ENSAPOG00000007799	dkc1	87	80.180	Acanthochromis_polyacanthus
ENSCAFG00000019620	-	91	94.692	ENSAMEG00000002776	DKC1	100	92.843	Ailuropoda_melanoleuca
ENSCAFG00000019620	-	88	77.974	ENSACIG00000022614	dkc1	92	78.889	Amphilophus_citrinellus
ENSCAFG00000019620	-	77	85.500	ENSAOCG00000013159	dkc1	90	79.186	Amphiprion_ocellaris
ENSCAFG00000019620	-	81	82.536	ENSAPEG00000002284	dkc1	89	80.000	Amphiprion_percula
ENSCAFG00000019620	-	78	83.942	ENSATEG00000013682	dkc1	88	78.587	Anabas_testudineus
ENSCAFG00000019620	-	86	84.494	ENSACAG00000015600	DKC1	74	85.169	Anolis_carolinensis
ENSCAFG00000019620	-	96	90.637	ENSANAG00000022732	DKC1	97	90.551	Aotus_nancymaae
ENSCAFG00000019620	-	77	86.111	ENSACLG00000015605	dkc1	90	79.101	Astatotilapia_calliptera
ENSCAFG00000019620	-	86	79.505	ENSAMXG00000017108	dkc1	90	77.632	Astyanax_mexicanus
ENSCAFG00000019620	-	100	90.329	ENSBTAG00000013045	DKC1	100	90.522	Bos_taurus
ENSCAFG00000019620	-	80	66.828	WBGene00010478	K01G5.5	98	64.108	Caenorhabditis_elegans
ENSCAFG00000019620	-	97	89.941	ENSCJAG00000004210	DKC1	97	89.587	Callithrix_jacchus
ENSCAFG00000019620	-	100	100.000	ENSCAFG00020008918	-	100	100.000	Canis_lupus_dingo
ENSCAFG00000019620	-	97	82.635	ENSCAFG00020009379	-	93	82.669	Canis_lupus_dingo
ENSCAFG00000019620	-	97	90.600	ENSCHIG00000017392	DKC1	97	90.239	Capra_hircus
ENSCAFG00000019620	-	99	88.676	ENSTSYG00000007681	DKC1	99	89.251	Carlito_syrichta
ENSCAFG00000019620	-	86	88.514	ENSCAPG00000003342	DKC1	91	92.892	Cavia_aperea
ENSCAFG00000019620	-	100	88.145	ENSCPOG00000008825	DKC1	100	88.145	Cavia_porcellus
ENSCAFG00000019620	-	97	82.213	ENSCCAG00000027418	DKC1	100	81.679	Cebus_capucinus
ENSCAFG00000019620	-	97	89.921	ENSCATG00000033602	DKC1	97	89.567	Cercocebus_atys
ENSCAFG00000019620	-	96	90.200	ENSCLAG00000000720	DKC1	97	90.239	Chinchilla_lanigera
ENSCAFG00000019620	-	97	90.119	ENSCSAG00000006706	DKC1	97	89.764	Chlorocebus_sabaeus
ENSCAFG00000019620	-	82	88.706	ENSCPBG00000005858	DKC1	93	87.788	Chrysemys_picta_bellii
ENSCAFG00000019620	-	84	73.272	ENSCING00000004599	-	83	72.545	Ciona_intestinalis
ENSCAFG00000019620	-	81	74.463	ENSCSAVG00000010047	-	97	73.318	Ciona_savignyi
ENSCAFG00000019620	-	97	90.119	ENSCANG00000027987	DKC1	97	89.764	Colobus_angolensis_palliatus
ENSCAFG00000019620	-	96	64.386	ENSCGRG00001016789	-	94	65.401	Cricetulus_griseus_chok1gshd
ENSCAFG00000019620	-	100	86.616	ENSCGRG00001014574	-	100	86.807	Cricetulus_griseus_chok1gshd
ENSCAFG00000019620	-	98	63.583	ENSCGRG00000014809	-	92	65.401	Cricetulus_griseus_crigri
ENSCAFG00000019620	-	100	86.616	ENSCGRG00000016075	-	100	86.807	Cricetulus_griseus_crigri
ENSCAFG00000019620	-	78	85.360	ENSCSEG00000012633	dkc1	92	79.954	Cynoglossus_semilaevis
ENSCAFG00000019620	-	76	85.787	ENSCVAG00000010155	dkc1	86	79.545	Cyprinodon_variegatus
ENSCAFG00000019620	-	80	83.575	ENSDARG00000016484	dkc1	90	77.412	Danio_rerio
ENSCAFG00000019620	-	100	88.145	ENSDNOG00000004218	DKC1	100	87.572	Dasypus_novemcinctus
ENSCAFG00000019620	-	58	83.667	ENSDORG00000013566	-	100	83.667	Dipodomys_ordii
ENSCAFG00000019620	-	81	71.770	FBgn0259937	Nop60B	89	67.980	Drosophila_melanogaster
ENSCAFG00000019620	-	81	93.556	ENSETEG00000016095	DKC1	85	93.556	Echinops_telfairi
ENSCAFG00000019620	-	65	77.811	ENSEBUG00000015962	dkc1	99	81.911	Eptatretus_burgeri
ENSCAFG00000019620	-	100	93.269	ENSEASG00005007484	DKC1	100	93.269	Equus_asinus_asinus
ENSCAFG00000019620	-	100	93.269	ENSECAG00000023524	DKC1	100	93.269	Equus_caballus
ENSCAFG00000019620	-	84	88.991	ENSEEUG00000003323	DKC1	100	88.761	Erinaceus_europaeus
ENSCAFG00000019620	-	88	77.753	ENSELUG00000014538	dkc1	88	79.730	Esox_lucius
ENSCAFG00000019620	-	100	90.909	ENSFCAG00000006577	DKC1	100	91.876	Felis_catus
ENSCAFG00000019620	-	86	82.000	ENSFALG00000011496	DKC1	83	82.000	Ficedula_albicollis
ENSCAFG00000019620	-	96	88.247	ENSFDAG00000002516	DKC1	100	87.283	Fukomys_damarensis
ENSCAFG00000019620	-	86	78.125	ENSFHEG00000004627	dkc1	88	79.007	Fundulus_heteroclitus
ENSCAFG00000019620	-	76	82.864	ENSGMOG00000017277	dkc1	100	82.864	Gadus_morhua
ENSCAFG00000019620	-	86	84.234	ENSGALG00000005054	DKC1	83	84.234	Gallus_gallus
ENSCAFG00000019620	-	79	83.455	ENSGAFG00000011486	dkc1	76	78.700	Gambusia_affinis
ENSCAFG00000019620	-	77	86.616	ENSGACG00000004373	dkc1	96	88.754	Gasterosteus_aculeatus
ENSCAFG00000019620	-	92	81.031	ENSGAGG00000011330	DKC1	86	83.836	Gopherus_agassizii
ENSCAFG00000019620	-	97	90.711	ENSGGOG00000001045	DKC1	97	90.354	Gorilla_gorilla
ENSCAFG00000019620	-	81	82.660	ENSHBUG00000012436	dkc1	89	79.018	Haplochromis_burtoni
ENSCAFG00000019620	-	89	93.028	ENSHGLG00000000649	DKC1	100	87.856	Heterocephalus_glaber_female
ENSCAFG00000019620	-	88	92.936	ENSHGLG00100001153	DKC1	100	87.716	Heterocephalus_glaber_male
ENSCAFG00000019620	-	76	86.076	ENSHCOG00000021099	dkc1	79	85.965	Hippocampus_comes
ENSCAFG00000019620	-	84	80.822	ENSIPUG00000010309	dkc1	84	80.822	Ictalurus_punctatus
ENSCAFG00000019620	-	100	80.497	ENSSTOG00000020149	-	100	80.497	Ictidomys_tridecemlineatus
ENSCAFG00000019620	-	91	91.387	ENSSTOG00000001074	-	96	91.387	Ictidomys_tridecemlineatus
ENSCAFG00000019620	-	97	79.093	ENSSTOG00000011904	-	94	79.331	Ictidomys_tridecemlineatus
ENSCAFG00000019620	-	58	84.333	ENSJJAG00000010086	-	100	84.333	Jaculus_jaculus
ENSCAFG00000019620	-	78	83.127	ENSKMAG00000008010	dkc1	81	83.333	Kryptolebias_marmoratus
ENSCAFG00000019620	-	78	85.037	ENSLBEG00000019122	dkc1	94	77.802	Labrus_bergylta
ENSCAFG00000019620	-	77	88.442	ENSLACG00000014025	DKC1	91	88.442	Latimeria_chalumnae
ENSCAFG00000019620	-	79	85.401	ENSLOCG00000013713	dkc1	84	86.352	Lepisosteus_oculatus
ENSCAFG00000019620	-	97	87.945	ENSLAFG00000000221	DKC1	89	91.258	Loxodonta_africana
ENSCAFG00000019620	-	97	90.711	ENSMFAG00000032398	DKC1	86	90.267	Macaca_fascicularis
ENSCAFG00000019620	-	97	90.119	ENSMMUG00000005768	DKC1	99	88.846	Macaca_mulatta
ENSCAFG00000019620	-	97	90.119	ENSMNEG00000034503	DKC1	97	89.764	Macaca_nemestrina
ENSCAFG00000019620	-	97	90.119	ENSMLEG00000034422	DKC1	97	89.764	Mandrillus_leucophaeus
ENSCAFG00000019620	-	82	82.227	ENSMAMG00000005427	dkc1	93	83.373	Mastacembelus_armatus
ENSCAFG00000019620	-	81	82.898	ENSMZEG00005014503	dkc1	89	79.241	Maylandia_zebra
ENSCAFG00000019620	-	79	83.538	ENSMGAG00000009238	DKC1	85	83.538	Meleagris_gallopavo
ENSCAFG00000019620	-	58	84.000	ENSMAUG00000016454	-	100	84.000	Mesocricetus_auratus
ENSCAFG00000019620	-	86	79.379	ENSMICG00000002818	-	99	83.791	Microcebus_murinus
ENSCAFG00000019620	-	100	89.595	ENSMICG00000038751	-	100	89.981	Microcebus_murinus
ENSCAFG00000019620	-	58	81.000	ENSMOCG00000001169	-	100	81.000	Microtus_ochrogaster
ENSCAFG00000019620	-	77	85.859	ENSMMOG00000020348	dkc1	86	85.859	Mola_mola
ENSCAFG00000019620	-	83	88.345	ENSMODG00000009243	DKC1	75	88.345	Monodelphis_domestica
ENSCAFG00000019620	-	77	85.464	ENSMALG00000009454	dkc1	79	85.464	Monopterus_albus
ENSCAFG00000019620	-	100	77.316	MGP_CAROLIEiJ_G0033191	Dkc1	100	93.243	Mus_caroli
ENSCAFG00000019620	-	100	86.564	ENSMUSG00000031403	Dkc1	100	86.180	Mus_musculus
ENSCAFG00000019620	-	97	87.549	MGP_PahariEiJ_G0031735	Dkc1	97	87.377	Mus_pahari
ENSCAFG00000019620	-	100	86.180	MGP_SPRETEiJ_G0034351	Dkc1	100	85.797	Mus_spretus
ENSCAFG00000019620	-	99	92.233	ENSMPUG00000016136	DKC1	96	92.233	Mustela_putorius_furo
ENSCAFG00000019620	-	91	86.229	ENSMLUG00000011918	DKC1	100	83.051	Myotis_lucifugus
ENSCAFG00000019620	-	58	84.333	ENSNGAG00000015724	-	100	84.333	Nannospalax_galili
ENSCAFG00000019620	-	77	86.616	ENSNBRG00000005638	dkc1	80	86.616	Neolamprologus_brichardi
ENSCAFG00000019620	-	97	90.909	ENSNLEG00000014323	DKC1	100	90.076	Nomascus_leucogenys
ENSCAFG00000019620	-	91	78.769	ENSMEUG00000001066	DKC1	95	82.648	Notamacropus_eugenii
ENSCAFG00000019620	-	71	89.617	ENSOPRG00000005248	DKC1	73	89.617	Ochotona_princeps
ENSCAFG00000019620	-	58	85.333	ENSODEG00000000549	-	100	85.333	Octodon_degus
ENSCAFG00000019620	-	84	94.725	ENSODEG00000011816	-	89	91.810	Octodon_degus
ENSCAFG00000019620	-	81	84.086	ENSONIG00000013889	dkc1	89	80.313	Oreochromis_niloticus
ENSCAFG00000019620	-	57	63.107	ENSOANG00000022295	-	83	63.754	Ornithorhynchus_anatinus
ENSCAFG00000019620	-	84	88.303	ENSOANG00000008713	-	87	88.303	Ornithorhynchus_anatinus
ENSCAFG00000019620	-	97	90.099	ENSOCUG00000012646	DKC1	100	88.740	Oryctolagus_cuniculus
ENSCAFG00000019620	-	76	85.934	ENSORLG00000018748	dkc1	89	76.821	Oryzias_latipes
ENSCAFG00000019620	-	78	84.367	ENSOMEG00000005786	dkc1	82	85.774	Oryzias_melastigma
ENSCAFG00000019620	-	97	90.909	ENSOGAG00000003399	DKC1	97	90.730	Otolemur_garnettii
ENSCAFG00000019620	-	97	89.600	ENSOARG00000003047	DKC1	97	89.243	Ovis_aries
ENSCAFG00000019620	-	97	90.316	ENSPPAG00000023820	DKC1	100	89.695	Pan_paniscus
ENSCAFG00000019620	-	91	92.569	ENSPPRG00000009104	DKC1	100	92.070	Panthera_pardus
ENSCAFG00000019620	-	90	90.558	ENSPTIG00000017469	DKC1	99	89.062	Panthera_tigris_altaica
ENSCAFG00000019620	-	97	90.711	ENSPTRG00000043416	-	84	90.748	Pan_troglodytes
ENSCAFG00000019620	-	97	90.711	ENSPTRG00000022449	DKC1	97	90.354	Pan_troglodytes
ENSCAFG00000019620	-	97	90.119	ENSPANG00000011978	DKC1	97	89.764	Papio_anubis
ENSCAFG00000019620	-	88	79.341	ENSPKIG00000008443	dkc1	95	78.681	Paramormyrops_kingsleyae
ENSCAFG00000019620	-	71	90.323	ENSPSIG00000013765	DKC1	86	93.017	Pelodiscus_sinensis
ENSCAFG00000019620	-	77	82.071	ENSPMGG00000004097	dkc1	73	82.071	Periophthalmus_magnuspinnatus
ENSCAFG00000019620	-	97	54.635	ENSPEMG00000013348	Dkc1	100	96.410	Peromyscus_maniculatus_bairdii
ENSCAFG00000019620	-	83	89.744	ENSPCIG00000016706	DKC1	76	84.946	Phascolarctos_cinereus
ENSCAFG00000019620	-	80	83.738	ENSPFOG00000018653	dkc1	89	79.195	Poecilia_formosa
ENSCAFG00000019620	-	80	83.738	ENSPLAG00000003272	dkc1	80	79.195	Poecilia_latipinna
ENSCAFG00000019620	-	81	82.423	ENSPMEG00000010413	dkc1	89	79.596	Poecilia_mexicana
ENSCAFG00000019620	-	80	83.981	ENSPREG00000004100	dkc1	87	78.146	Poecilia_reticulata
ENSCAFG00000019620	-	96	90.619	ENSPPYG00000020892	DKC1	100	89.788	Pongo_abelii
ENSCAFG00000019620	-	72	94.920	ENSPCAG00000015034	DKC1	73	94.920	Procavia_capensis
ENSCAFG00000019620	-	97	90.514	ENSPCOG00000026874	DKC1	100	90.076	Propithecus_coquereli
ENSCAFG00000019620	-	97	88.492	ENSPVAG00000009222	DKC1	97	88.317	Pteropus_vampyrus
ENSCAFG00000019620	-	77	86.111	ENSPNYG00000020063	dkc1	79	86.111	Pundamilia_nyererei
ENSCAFG00000019620	-	90	79.355	ENSPNAG00000005780	dkc1	93	76.759	Pygocentrus_nattereri
ENSCAFG00000019620	-	97	80.517	ENSRNOG00000055562	Dkc1	99	79.961	Rattus_norvegicus
ENSCAFG00000019620	-	97	90.119	ENSRBIG00000028457	DKC1	86	89.695	Rhinopithecus_bieti
ENSCAFG00000019620	-	97	90.119	ENSRROG00000044780	DKC1	97	89.764	Rhinopithecus_roxellana
ENSCAFG00000019620	-	74	71.354	YLR175W	-	85	67.386	Saccharomyces_cerevisiae
ENSCAFG00000019620	-	99	89.808	ENSSBOG00000033746	DKC1	99	90.192	Saimiri_boliviensis_boliviensis
ENSCAFG00000019620	-	90	84.946	ENSSHAG00000002463	DKC1	95	84.946	Sarcophilus_harrisii
ENSCAFG00000019620	-	84	82.798	ENSSFOG00015009585	dkc1	85	82.798	Scleropages_formosus
ENSCAFG00000019620	-	87	79.065	ENSSMAG00000002552	dkc1	88	80.227	Scophthalmus_maximus
ENSCAFG00000019620	-	77	86.250	ENSSDUG00000009963	dkc1	90	79.601	Seriola_dumerili
ENSCAFG00000019620	-	76	87.023	ENSSLDG00000019342	dkc1	89	82.588	Seriola_lalandi_dorsalis
ENSCAFG00000019620	-	95	82.556	ENSSARG00000001822	DKC1	97	82.258	Sorex_araneus
ENSCAFG00000019620	-	85	85.261	ENSSPUG00000018907	DKC1	83	85.135	Sphenodon_punctatus
ENSCAFG00000019620	-	91	75.052	ENSSPAG00000002585	dkc1	85	79.018	Stegastes_partitus
ENSCAFG00000019620	-	100	91.747	ENSSSCG00000012823	DKC1	100	91.747	Sus_scrofa
ENSCAFG00000019620	-	79	83.538	ENSTGUG00000006781	DKC1	89	82.567	Taeniopygia_guttata
ENSCAFG00000019620	-	78	85.536	ENSTRUG00000004413	dkc1	81	85.536	Takifugu_rubripes
ENSCAFG00000019620	-	78	68.796	ENSTNIG00000002582	dkc1	78	69.403	Tetraodon_nigroviridis
ENSCAFG00000019620	-	71	84.987	ENSTBEG00000011262	DKC1	100	84.987	Tupaia_belangeri
ENSCAFG00000019620	-	74	92.459	ENSTTRG00000008089	DKC1	76	92.459	Tursiops_truncatus
ENSCAFG00000019620	-	95	94.501	ENSUAMG00000022721	DKC1	95	96.452	Ursus_americanus
ENSCAFG00000019620	-	95	94.297	ENSUMAG00000016899	DKC1	97	95.455	Ursus_maritimus
ENSCAFG00000019620	-	97	77.535	ENSVVUG00000021671	-	92	76.984	Vulpes_vulpes
ENSCAFG00000019620	-	99	97.881	ENSVVUG00000020734	-	89	97.881	Vulpes_vulpes
ENSCAFG00000019620	-	91	78.692	ENSXETG00000032517	DKC1	85	81.027	Xenopus_tropicalis
ENSCAFG00000019620	-	77	85.354	ENSXCOG00000005498	dkc1	95	77.827	Xiphophorus_couchianus
ENSCAFG00000019620	-	80	83.495	ENSXMAG00000004919	dkc1	89	78.747	Xiphophorus_maculatus