EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCAFG00000019972 (Gene tree)
Gene ID: 490136
Gene Symbol: RNPC3
Alias: FLJ20008|KIAA1839|RBM40|SNRNP65
Full Name: RNA binding region (RNP1%2C RRM) containing 3
Gene Type: protein_coding
Species: Canis_familiaris
Status: putative
Strand: Minus strand
Length: 27979 bases
Position: chr6:47016178-47044156
Accession: 490136
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00000029595	RRM_1	PF00076.22	5.3e-18	1	2
ENSCAFP00000029595	RRM_1	PF00076.22	5.3e-18	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00000031786	RNPC3-201	1644	XM_005621848	ENSCAFP00000029595	518 (aa)	XP_005621905	F1PE39

Gene Model

Click here to download ENSCAFG00000019972's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00000019972's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00000019972	RNPC3	100	92.664	ENSG00000185946	RNPC3	100	94.086	Homo_sapiens
ENSCAFG00000019972	RNPC3	95	56.452	ENSAPOG00000017371	rnpc3	97	56.452	Acanthochromis_polyacanthus
ENSCAFG00000019972	RNPC3	100	96.346	ENSAMEG00000001694	RNPC3	100	96.346	Ailuropoda_melanoleuca
ENSCAFG00000019972	RNPC3	95	53.200	ENSACIG00000021043	rnpc3	97	53.200	Amphilophus_citrinellus
ENSCAFG00000019972	RNPC3	95	56.313	ENSAOCG00000014052	rnpc3	95	56.112	Amphiprion_ocellaris
ENSCAFG00000019972	RNPC3	95	56.112	ENSAPEG00000008739	rnpc3	95	55.912	Amphiprion_percula
ENSCAFG00000019972	RNPC3	95	54.092	ENSATEG00000021263	rnpc3	97	54.092	Anabas_testudineus
ENSCAFG00000019972	RNPC3	87	69.163	ENSAPLG00000015605	RNPC3	99	69.824	Anas_platyrhynchos
ENSCAFG00000019972	RNPC3	95	67.276	ENSACAG00000002029	RNPC3	97	67.396	Anolis_carolinensis
ENSCAFG00000019972	RNPC3	100	92.085	ENSANAG00000019950	RNPC3	100	92.085	Aotus_nancymaae
ENSCAFG00000019972	RNPC3	94	54.858	ENSACLG00000014702	rnpc3	96	54.767	Astatotilapia_calliptera
ENSCAFG00000019972	RNPC3	94	57.551	ENSAMXG00000033372	rnpc3	96	57.551	Astyanax_mexicanus
ENSCAFG00000019972	RNPC3	100	93.629	ENSBTAG00000019091	RNPC3	100	93.629	Bos_taurus
ENSCAFG00000019972	RNPC3	100	87.838	ENSCJAG00000035686	RNPC3	100	88.224	Callithrix_jacchus
ENSCAFG00000019972	RNPC3	100	99.807	ENSCAFG00020011300	RNPC3	100	99.807	Canis_lupus_dingo
ENSCAFG00000019972	RNPC3	100	93.436	ENSCHIG00000020361	RNPC3	100	93.436	Capra_hircus
ENSCAFG00000019972	RNPC3	100	90.154	ENSTSYG00000030256	RNPC3	100	90.154	Carlito_syrichta
ENSCAFG00000019972	RNPC3	84	78.490	ENSCAPG00000013600	RNPC3	99	77.346	Cavia_aperea
ENSCAFG00000019972	RNPC3	100	89.768	ENSCPOG00000031638	RNPC3	100	89.768	Cavia_porcellus
ENSCAFG00000019972	RNPC3	100	92.085	ENSCCAG00000024301	RNPC3	100	92.085	Cebus_capucinus
ENSCAFG00000019972	RNPC3	98	70.217	ENSCATG00000035930	-	99	68.836	Cercocebus_atys
ENSCAFG00000019972	RNPC3	99	92.248	ENSCATG00000002086	RNPC3	99	92.248	Cercocebus_atys
ENSCAFG00000019972	RNPC3	100	86.486	ENSCLAG00000005169	RNPC3	100	86.486	Chinchilla_lanigera
ENSCAFG00000019972	RNPC3	99	92.054	ENSCSAG00000001519	RNPC3	99	92.054	Chlorocebus_sabaeus
ENSCAFG00000019972	RNPC3	98	69.246	ENSCPBG00000028311	RNPC3	99	69.246	Chrysemys_picta_bellii
ENSCAFG00000019972	RNPC3	58	61.667	ENSCSAVG00000002800	-	74	61.667	Ciona_savignyi
ENSCAFG00000019972	RNPC3	99	92.054	ENSCANG00000031444	RNPC3	99	92.054	Colobus_angolensis_palliatus
ENSCAFG00000019972	RNPC3	99	89.555	ENSCGRG00001019276	Rnpc3	100	89.555	Cricetulus_griseus_chok1gshd
ENSCAFG00000019972	RNPC3	87	89.823	ENSCGRG00000000053	Rnpc3	100	89.823	Cricetulus_griseus_crigri
ENSCAFG00000019972	RNPC3	94	54.582	ENSCSEG00000013475	rnpc3	96	54.286	Cynoglossus_semilaevis
ENSCAFG00000019972	RNPC3	94	55.179	ENSCVAG00000002645	rnpc3	97	54.851	Cyprinodon_variegatus
ENSCAFG00000019972	RNPC3	95	57.631	ENSDARG00000011247	rnpc3	97	58.032	Danio_rerio
ENSCAFG00000019972	RNPC3	100	91.892	ENSDNOG00000047498	-	100	91.892	Dasypus_novemcinctus
ENSCAFG00000019972	RNPC3	100	92.278	ENSDNOG00000044555	-	100	92.278	Dasypus_novemcinctus
ENSCAFG00000019972	RNPC3	99	89.749	ENSDORG00000027343	Rnpc3	99	89.749	Dipodomys_ordii
ENSCAFG00000019972	RNPC3	94	48.919	ENSEBUG00000002068	rnpc3	97	48.718	Eptatretus_burgeri
ENSCAFG00000019972	RNPC3	100	93.629	ENSEASG00005015957	RNPC3	100	93.629	Equus_asinus_asinus
ENSCAFG00000019972	RNPC3	100	93.629	ENSECAG00000021148	RNPC3	100	93.629	Equus_caballus
ENSCAFG00000019972	RNPC3	95	53.425	ENSELUG00000002264	rnpc3	97	51.154	Esox_lucius
ENSCAFG00000019972	RNPC3	100	96.525	ENSFCAG00000024312	RNPC3	100	96.525	Felis_catus
ENSCAFG00000019972	RNPC3	87	71.366	ENSFALG00000002580	RNPC3	99	71.770	Ficedula_albicollis
ENSCAFG00000019972	RNPC3	99	90.522	ENSFDAG00000019948	RNPC3	100	90.522	Fukomys_damarensis
ENSCAFG00000019972	RNPC3	95	51.509	ENSFHEG00000020647	rnpc3	98	50.294	Fundulus_heteroclitus
ENSCAFG00000019972	RNPC3	94	54.747	ENSGMOG00000019213	rnpc3	95	53.213	Gadus_morhua
ENSCAFG00000019972	RNPC3	95	71.515	ENSGALG00000005162	RNPC3	89	70.909	Gallus_gallus
ENSCAFG00000019972	RNPC3	94	53.200	ENSGAFG00000017236	rnpc3	96	53.187	Gambusia_affinis
ENSCAFG00000019972	RNPC3	94	54.990	ENSGACG00000002048	rnpc3	96	54.781	Gasterosteus_aculeatus
ENSCAFG00000019972	RNPC3	95	70.624	ENSGAGG00000008438	RNPC3	98	69.336	Gopherus_agassizii
ENSCAFG00000019972	RNPC3	98	74.753	ENSGGOG00000026201	-	99	74.225	Gorilla_gorilla
ENSCAFG00000019972	RNPC3	78	78.947	ENSHBUG00000015966	rnpc3	82	78.947	Haplochromis_burtoni
ENSCAFG00000019972	RNPC3	100	90.734	ENSHGLG00000001708	RNPC3	100	90.734	Heterocephalus_glaber_female
ENSCAFG00000019972	RNPC3	100	90.734	ENSHGLG00100003005	RNPC3	100	90.734	Heterocephalus_glaber_male
ENSCAFG00000019972	RNPC3	95	54.016	ENSHCOG00000017135	rnpc3	97	54.016	Hippocampus_comes
ENSCAFG00000019972	RNPC3	95	56.513	ENSIPUG00000002916	rnpc3	97	56.375	Ictalurus_punctatus
ENSCAFG00000019972	RNPC3	100	90.347	ENSSTOG00000025020	RNPC3	100	90.347	Ictidomys_tridecemlineatus
ENSCAFG00000019972	RNPC3	99	85.687	ENSJJAG00000010203	Rnpc3	100	87.234	Jaculus_jaculus
ENSCAFG00000019972	RNPC3	95	54.949	ENSKMAG00000017358	rnpc3	97	54.365	Kryptolebias_marmoratus
ENSCAFG00000019972	RNPC3	95	55.040	ENSLBEG00000024901	rnpc3	95	55.040	Labrus_bergylta
ENSCAFG00000019972	RNPC3	94	61.943	ENSLACG00000005720	RNPC3	90	62.551	Latimeria_chalumnae
ENSCAFG00000019972	RNPC3	94	58.487	ENSLOCG00000007986	rnpc3	96	60.736	Lepisosteus_oculatus
ENSCAFG00000019972	RNPC3	99	89.942	ENSLAFG00000032342	RNPC3	100	91.296	Loxodonta_africana
ENSCAFG00000019972	RNPC3	99	92.054	ENSMFAG00000002004	RNPC3	99	92.054	Macaca_fascicularis
ENSCAFG00000019972	RNPC3	99	66.860	ENSMFAG00000002917	-	99	67.054	Macaca_fascicularis
ENSCAFG00000019972	RNPC3	99	92.054	ENSMMUG00000018039	RNPC3	99	92.054	Macaca_mulatta
ENSCAFG00000019972	RNPC3	81	83.721	ENSMMUG00000002098	-	91	83.721	Macaca_mulatta
ENSCAFG00000019972	RNPC3	98	63.654	ENSMNEG00000029209	-	99	65.815	Macaca_nemestrina
ENSCAFG00000019972	RNPC3	99	87.403	ENSMNEG00000033950	RNPC3	99	87.403	Macaca_nemestrina
ENSCAFG00000019972	RNPC3	99	92.248	ENSMLEG00000033628	RNPC3	99	92.248	Mandrillus_leucophaeus
ENSCAFG00000019972	RNPC3	98	69.727	ENSMLEG00000034644	-	98	66.408	Mandrillus_leucophaeus
ENSCAFG00000019972	RNPC3	95	51.503	ENSMAMG00000007496	rnpc3	97	50.292	Mastacembelus_armatus
ENSCAFG00000019972	RNPC3	94	53.968	ENSMZEG00005020233	rnpc3	97	53.877	Maylandia_zebra
ENSCAFG00000019972	RNPC3	87	70.769	ENSMGAG00000006381	RNPC3	99	70.989	Meleagris_gallopavo
ENSCAFG00000019972	RNPC3	96	90.782	ENSMAUG00000001358	Rnpc3	100	89.555	Mesocricetus_auratus
ENSCAFG00000019972	RNPC3	99	92.650	ENSMICG00000029591	RNPC3	99	92.650	Microcebus_murinus
ENSCAFG00000019972	RNPC3	97	90.000	ENSMOCG00000013423	Rnpc3	100	88.803	Microtus_ochrogaster
ENSCAFG00000019972	RNPC3	95	51.521	ENSMMOG00000005309	rnpc3	97	51.503	Mola_mola
ENSCAFG00000019972	RNPC3	99	78.337	ENSMODG00000002946	RNPC3	99	78.337	Monodelphis_domestica
ENSCAFG00000019972	RNPC3	94	53.012	ENSMALG00000015471	rnpc3	97	53.012	Monopterus_albus
ENSCAFG00000019972	RNPC3	99	87.427	MGP_CAROLIEiJ_G0025555	Rnpc3	100	87.427	Mus_caroli
ENSCAFG00000019972	RNPC3	99	87.814	ENSMUSG00000027981	Rnpc3	100	87.814	Mus_musculus
ENSCAFG00000019972	RNPC3	99	87.814	MGP_PahariEiJ_G0027001	Rnpc3	100	87.814	Mus_pahari
ENSCAFG00000019972	RNPC3	99	87.234	MGP_SPRETEiJ_G0026505	Rnpc3	100	87.234	Mus_spretus
ENSCAFG00000019972	RNPC3	100	96.139	ENSMPUG00000007349	RNPC3	100	96.139	Mustela_putorius_furo
ENSCAFG00000019972	RNPC3	100	90.154	ENSMLUG00000028743	RNPC3	100	90.154	Myotis_lucifugus
ENSCAFG00000019972	RNPC3	99	88.760	ENSNGAG00000010939	Rnpc3	99	88.760	Nannospalax_galili
ENSCAFG00000019972	RNPC3	94	54.564	ENSNBRG00000012196	rnpc3	93	54.564	Neolamprologus_brichardi
ENSCAFG00000019972	RNPC3	100	92.471	ENSNLEG00000012013	RNPC3	100	92.471	Nomascus_leucogenys
ENSCAFG00000019972	RNPC3	100	88.224	ENSODEG00000007612	RNPC3	100	88.224	Octodon_degus
ENSCAFG00000019972	RNPC3	94	54.858	ENSONIG00000004770	rnpc3	99	54.970	Oreochromis_niloticus
ENSCAFG00000019972	RNPC3	90	77.897	ENSOANG00000008220	RNPC3	99	78.326	Ornithorhynchus_anatinus
ENSCAFG00000019972	RNPC3	100	91.120	ENSOCUG00000004016	RNPC3	100	91.120	Oryctolagus_cuniculus
ENSCAFG00000019972	RNPC3	95	53.722	ENSORLG00000005694	rnpc3	97	51.953	Oryzias_latipes
ENSCAFG00000019972	RNPC3	95	54.234	ENSORLG00020005513	rnpc3	97	52.539	Oryzias_latipes_hni
ENSCAFG00000019972	RNPC3	95	53.831	ENSORLG00015002179	rnpc3	97	52.148	Oryzias_latipes_hsok
ENSCAFG00000019972	RNPC3	95	54.343	ENSOMEG00000017737	rnpc3	97	55.847	Oryzias_melastigma
ENSCAFG00000019972	RNPC3	100	92.471	ENSOGAG00000026182	RNPC3	100	92.471	Otolemur_garnettii
ENSCAFG00000019972	RNPC3	100	93.243	ENSOARG00000018719	RNPC3	100	93.243	Ovis_aries
ENSCAFG00000019972	RNPC3	100	92.293	ENSPPAG00000037459	RNPC3	100	92.293	Pan_paniscus
ENSCAFG00000019972	RNPC3	100	74.710	ENSPPAG00000030278	-	100	74.903	Pan_paniscus
ENSCAFG00000019972	RNPC3	100	97.297	ENSPPRG00000020246	RNPC3	100	97.297	Panthera_pardus
ENSCAFG00000019972	RNPC3	98	97.244	ENSPTIG00000009887	RNPC3	100	97.244	Panthera_tigris_altaica
ENSCAFG00000019972	RNPC3	100	92.471	ENSPTRG00000033902	RNPC3	100	92.471	Pan_troglodytes
ENSCAFG00000019972	RNPC3	100	74.710	ENSPTRG00000044227	-	100	74.710	Pan_troglodytes
ENSCAFG00000019972	RNPC3	98	72.888	ENSPANG00000029957	-	100	71.709	Papio_anubis
ENSCAFG00000019972	RNPC3	99	92.248	ENSPANG00000012137	RNPC3	99	92.248	Papio_anubis
ENSCAFG00000019972	RNPC3	95	52.157	ENSPKIG00000008828	rnpc3	95	51.772	Paramormyrops_kingsleyae
ENSCAFG00000019972	RNPC3	63	68.373	ENSPSIG00000007396	RNPC3	99	66.867	Pelodiscus_sinensis
ENSCAFG00000019972	RNPC3	93	51.822	ENSPMGG00000011742	rnpc3	95	52.333	Periophthalmus_magnuspinnatus
ENSCAFG00000019972	RNPC3	88	88.840	ENSPEMG00000020112	Rnpc3	100	89.602	Peromyscus_maniculatus_bairdii
ENSCAFG00000019972	RNPC3	96	45.873	ENSPMAG00000003778	rnpc3	98	45.785	Petromyzon_marinus
ENSCAFG00000019972	RNPC3	99	79.304	ENSPCIG00000004415	-	99	79.304	Phascolarctos_cinereus
ENSCAFG00000019972	RNPC3	96	53.094	ENSPFOG00000009895	rnpc3	97	53.320	Poecilia_formosa
ENSCAFG00000019972	RNPC3	96	52.894	ENSPLAG00000012023	rnpc3	97	53.119	Poecilia_latipinna
ENSCAFG00000019972	RNPC3	96	53.293	ENSPMEG00000003663	rnpc3	97	53.521	Poecilia_mexicana
ENSCAFG00000019972	RNPC3	96	53.094	ENSPREG00000010206	rnpc3	99	52.539	Poecilia_reticulata
ENSCAFG00000019972	RNPC3	84	88.736	ENSPPYG00000001102	RNPC3	99	88.736	Pongo_abelii
ENSCAFG00000019972	RNPC3	94	54.656	ENSPNYG00000020603	rnpc3	96	54.564	Pundamilia_nyererei
ENSCAFG00000019972	RNPC3	95	54.762	ENSPNAG00000000524	rnpc3	89	54.960	Pygocentrus_nattereri
ENSCAFG00000019972	RNPC3	99	87.234	ENSRNOG00000017310	Rnpc3	100	87.234	Rattus_norvegicus
ENSCAFG00000019972	RNPC3	99	86.847	ENSRBIG00000043897	RNPC3	99	86.847	Rhinopithecus_bieti
ENSCAFG00000019972	RNPC3	99	92.636	ENSRROG00000032334	RNPC3	99	92.636	Rhinopithecus_roxellana
ENSCAFG00000019972	RNPC3	100	91.313	ENSSBOG00000024473	RNPC3	100	91.313	Saimiri_boliviensis_boliviensis
ENSCAFG00000019972	RNPC3	99	78.723	ENSSHAG00000011859	RNPC3	99	78.723	Sarcophilus_harrisii
ENSCAFG00000019972	RNPC3	95	59.394	ENSSFOG00015013055	rnpc3	99	57.367	Scleropages_formosus
ENSCAFG00000019972	RNPC3	95	52.295	ENSSMAG00000020346	rnpc3	97	50.581	Scophthalmus_maximus
ENSCAFG00000019972	RNPC3	94	54.871	ENSSDUG00000006600	rnpc3	96	54.871	Seriola_dumerili
ENSCAFG00000019972	RNPC3	94	55.289	ENSSLDG00000007979	rnpc3	96	55.289	Seriola_lalandi_dorsalis
ENSCAFG00000019972	RNPC3	95	71.255	ENSSPUG00000008539	-	94	71.602	Sphenodon_punctatus
ENSCAFG00000019972	RNPC3	96	65.800	ENSSPUG00000003872	-	93	65.800	Sphenodon_punctatus
ENSCAFG00000019972	RNPC3	95	55.285	ENSSPAG00000005633	rnpc3	97	56.098	Stegastes_partitus
ENSCAFG00000019972	RNPC3	100	93.243	ENSSSCG00000037254	RNPC3	100	91.892	Sus_scrofa
ENSCAFG00000019972	RNPC3	87	71.302	ENSTGUG00000004795	-	99	70.419	Taeniopygia_guttata
ENSCAFG00000019972	RNPC3	95	55.110	ENSTNIG00000018963	rnpc3	97	55.110	Tetraodon_nigroviridis
ENSCAFG00000019972	RNPC3	98	97.638	ENSUMAG00000007775	RNPC3	100	97.638	Ursus_maritimus
ENSCAFG00000019972	RNPC3	100	99.807	ENSVVUG00000000331	RNPC3	100	99.807	Vulpes_vulpes
ENSCAFG00000019972	RNPC3	95	52.600	ENSXETG00000025027	rnpc3	97	52.600	Xenopus_tropicalis
ENSCAFG00000019972	RNPC3	96	52.335	ENSXCOG00000005013	rnpc3	97	51.331	Xiphophorus_couchianus
ENSCAFG00000019972	RNPC3	96	53.267	ENSXMAG00000006495	rnpc3	97	53.479	Xiphophorus_maculatus