EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSCAFG00000020155 (Gene tree)
Gene ID: 490156
Gene Symbol: GFI1
Alias: -
Full Name: growth factor independent 1 transcriptional repressor
Gene Type: protein_coding
Species: Canis_familiaris
Status: putative
Strand: Plus strand
Length: 11819 bases
Position: chr6:56472947-56484765
Accession: 41181
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00000029887	zf-C2H2	PF00096.26	7.5e-27	1	6
ENSCAFP00000029887	zf-C2H2	PF00096.26	7.5e-27	2	6
ENSCAFP00000029887	zf-C2H2	PF00096.26	7.5e-27	3	6
ENSCAFP00000029887	zf-C2H2	PF00096.26	7.5e-27	4	6
ENSCAFP00000029887	zf-C2H2	PF00096.26	7.5e-27	5	6
ENSCAFP00000029887	zf-C2H2	PF00096.26	7.5e-27	6	6
ENSCAFP00000043191	zf-C2H2	PF00096.26	7.5e-27	1	6
ENSCAFP00000043191	zf-C2H2	PF00096.26	7.5e-27	2	6
ENSCAFP00000043191	zf-C2H2	PF00096.26	7.5e-27	3	6
ENSCAFP00000043191	zf-C2H2	PF00096.26	7.5e-27	4	6
ENSCAFP00000043191	zf-C2H2	PF00096.26	7.5e-27	5	6
ENSCAFP00000043191	zf-C2H2	PF00096.26	7.5e-27	6	6
ENSCAFP00000029887	zf-met	PF12874.7	1.2e-07	1	1
ENSCAFP00000043191	zf-met	PF12874.7	1.2e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00000049499	-	3094	-	ENSCAFP00000043191	422 (aa)	XP_022275208	Q5DWN0
ENSCAFT00000032093	-	2605	-	ENSCAFP00000029887	422 (aa)	XP_022275208	Q5DWN0

Gene Model

Click here to download ENSCAFG00000020155's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00000020155's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAFG00000020155	GFI1	52	46.429	ENSCAFG00000029228	ZNF770	65	45.614
ENSCAFG00000020155	GFI1	50	42.857	ENSCAFG00000018071	ZNF317	78	42.857
ENSCAFG00000020155	GFI1	52	43.972	ENSCAFG00000020085	ZFP1	75	43.972

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00000020155	GFI1	100	93.365	ENSG00000162676	GFI1	100	93.365	Homo_sapiens
ENSCAFG00000020155	GFI1	100	62.441	ENSAPOG00000015189	gfi1ab	100	62.207	Acanthochromis_polyacanthus
ENSCAFG00000020155	GFI1	100	60.798	ENSACIG00000016354	gfi1ab	100	62.441	Amphilophus_citrinellus
ENSCAFG00000020155	GFI1	100	54.481	ENSAOCG00000008339	gfi1ab	100	53.538	Amphiprion_ocellaris
ENSCAFG00000020155	GFI1	100	62.676	ENSAPEG00000023870	gfi1ab	100	62.441	Amphiprion_percula
ENSCAFG00000020155	GFI1	100	60.706	ENSATEG00000009167	gfi1ab	89	60.235	Anabas_testudineus
ENSCAFG00000020155	GFI1	87	75.741	ENSAPLG00000015700	GFI1	99	75.741	Anas_platyrhynchos
ENSCAFG00000020155	GFI1	100	71.824	ENSACAG00000004498	GFI1	100	71.132	Anolis_carolinensis
ENSCAFG00000020155	GFI1	100	91.469	ENSANAG00000019656	GFI1	100	91.469	Aotus_nancymaae
ENSCAFG00000020155	GFI1	100	63.170	ENSACLG00000026458	gfi1ab	93	62.238	Astatotilapia_calliptera
ENSCAFG00000020155	GFI1	100	60.656	ENSAMXG00000039600	gfi1ab	100	60.187	Astyanax_mexicanus
ENSCAFG00000020155	GFI1	67	46.205	ENSAMXG00000015228	-	56	62.360	Astyanax_mexicanus
ENSCAFG00000020155	GFI1	100	95.261	ENSBTAG00000016723	GFI1	100	95.261	Bos_taurus
ENSCAFG00000020155	GFI1	100	90.995	ENSCJAG00000017609	GFI1	100	90.995	Callithrix_jacchus
ENSCAFG00000020155	GFI1	100	100.000	ENSCAFG00020013371	GFI1	88	100.000	Canis_lupus_dingo
ENSCAFG00000020155	GFI1	100	95.024	ENSCHIG00000016135	GFI1	100	95.024	Capra_hircus
ENSCAFG00000020155	GFI1	100	90.047	ENSCPOG00000011727	GFI1	100	90.047	Cavia_porcellus
ENSCAFG00000020155	GFI1	100	91.706	ENSCCAG00000036072	GFI1	100	91.706	Cebus_capucinus
ENSCAFG00000020155	GFI1	100	92.891	ENSCATG00000037873	GFI1	100	92.891	Cercocebus_atys
ENSCAFG00000020155	GFI1	100	85.545	ENSCLAG00000005915	GFI1	100	83.871	Chinchilla_lanigera
ENSCAFG00000020155	GFI1	86	91.484	ENSCSAG00000001469	GFI1	100	91.484	Chlorocebus_sabaeus
ENSCAFG00000020155	GFI1	100	92.654	ENSCANG00000034077	GFI1	100	92.654	Colobus_angolensis_palliatus
ENSCAFG00000020155	GFI1	100	86.256	ENSCGRG00001015432	Gfi1	100	86.256	Cricetulus_griseus_chok1gshd
ENSCAFG00000020155	GFI1	100	58.741	ENSCSEG00000017729	GFI1	100	57.931	Cynoglossus_semilaevis
ENSCAFG00000020155	GFI1	100	61.449	ENSCVAG00000011828	gfi1ab	100	59.112	Cyprinodon_variegatus
ENSCAFG00000020155	GFI1	100	59.953	ENSCVAG00000004930	GFI1	100	60.140	Cyprinodon_variegatus
ENSCAFG00000020155	GFI1	100	64.486	ENSDARG00000044457	gfi1ab	100	64.486	Danio_rerio
ENSCAFG00000020155	GFI1	100	91.017	ENSDNOG00000000782	GFI1	97	92.435	Dasypus_novemcinctus
ENSCAFG00000020155	GFI1	100	92.908	ENSEASG00005015509	GFI1	86	93.144	Equus_asinus_asinus
ENSCAFG00000020155	GFI1	86	92.033	ENSECAG00000006647	GFI1	92	87.147	Equus_caballus
ENSCAFG00000020155	GFI1	100	85.308	ENSEEUG00000000198	GFI1	100	84.597	Erinaceus_europaeus
ENSCAFG00000020155	GFI1	100	63.805	ENSELUG00000003015	gfi1ab	99	63.573	Esox_lucius
ENSCAFG00000020155	GFI1	100	59.390	ENSELUG00000019033	GFI1	100	58.140	Esox_lucius
ENSCAFG00000020155	GFI1	100	97.630	ENSFCAG00000005914	GFI1	100	97.630	Felis_catus
ENSCAFG00000020155	GFI1	100	59.174	ENSFHEG00000000341	GFI1	100	59.268	Fundulus_heteroclitus
ENSCAFG00000020155	GFI1	100	62.326	ENSFHEG00000010997	gfi1ab	100	61.628	Fundulus_heteroclitus
ENSCAFG00000020155	GFI1	100	61.939	ENSGMOG00000007737	gfi1ab	100	61.939	Gadus_morhua
ENSCAFG00000020155	GFI1	100	74.246	ENSGALG00000043650	GFI1	100	74.246	Gallus_gallus
ENSCAFG00000020155	GFI1	100	58.430	ENSGAFG00000018063	GFI1	100	60.233	Gambusia_affinis
ENSCAFG00000020155	GFI1	100	61.538	ENSGAFG00000016637	gfi1ab	100	60.606	Gambusia_affinis
ENSCAFG00000020155	GFI1	100	62.175	ENSGACG00000004257	gfi1ab	97	62.648	Gasterosteus_aculeatus
ENSCAFG00000020155	GFI1	100	93.365	ENSGGOG00000005320	GFI1	100	93.365	Gorilla_gorilla
ENSCAFG00000020155	GFI1	100	63.294	ENSHBUG00000011969	gfi1ab	100	62.353	Haplochromis_burtoni
ENSCAFG00000020155	GFI1	100	89.573	ENSHGLG00000008020	GFI1	100	89.573	Heterocephalus_glaber_female
ENSCAFG00000020155	GFI1	100	89.573	ENSHGLG00100000610	GFI1	100	89.573	Heterocephalus_glaber_male
ENSCAFG00000020155	GFI1	100	56.604	ENSHCOG00000019555	GFI1	84	88.710	Hippocampus_comes
ENSCAFG00000020155	GFI1	100	57.077	ENSIPUG00000013414	GFI1	100	57.773	Ictalurus_punctatus
ENSCAFG00000020155	GFI1	100	62.500	ENSIPUG00000010071	gfi1ab	87	62.264	Ictalurus_punctatus
ENSCAFG00000020155	GFI1	100	91.232	ENSSTOG00000014583	GFI1	100	91.232	Ictidomys_tridecemlineatus
ENSCAFG00000020155	GFI1	100	63.700	ENSKMAG00000003810	gfi1ab	100	63.232	Kryptolebias_marmoratus
ENSCAFG00000020155	GFI1	100	62.911	ENSLBEG00000027776	gfi1ab	100	62.676	Labrus_bergylta
ENSCAFG00000020155	GFI1	100	70.327	ENSLACG00000013362	GFI1	98	70.000	Latimeria_chalumnae
ENSCAFG00000020155	GFI1	99	68.571	ENSLACG00000017590	-	99	68.571	Latimeria_chalumnae
ENSCAFG00000020155	GFI1	100	67.206	ENSLOCG00000004711	gfi1ab	100	66.513	Lepisosteus_oculatus
ENSCAFG00000020155	GFI1	100	86.730	ENSLAFG00000018346	GFI1	100	85.545	Loxodonta_africana
ENSCAFG00000020155	GFI1	100	92.891	ENSMFAG00000045801	GFI1	100	92.891	Macaca_fascicularis
ENSCAFG00000020155	GFI1	100	92.891	ENSMNEG00000036338	GFI1	100	92.891	Macaca_nemestrina
ENSCAFG00000020155	GFI1	100	92.891	ENSMLEG00000036181	GFI1	100	92.891	Mandrillus_leucophaeus
ENSCAFG00000020155	GFI1	100	64.085	ENSMAMG00000008125	gfi1ab	100	61.972	Mastacembelus_armatus
ENSCAFG00000020155	GFI1	100	63.403	ENSMZEG00005009895	gfi1ab	100	62.471	Maylandia_zebra
ENSCAFG00000020155	GFI1	88	76.613	ENSMGAG00000008187	GFI1	100	76.613	Meleagris_gallopavo
ENSCAFG00000020155	GFI1	100	93.365	ENSMICG00000047208	GFI1	100	93.365	Microcebus_murinus
ENSCAFG00000020155	GFI1	100	58.891	ENSMMOG00000005556	gfi1ab	100	58.430	Mola_mola
ENSCAFG00000020155	GFI1	100	80.320	ENSMODG00000011802	GFI1	100	79.176	Monodelphis_domestica
ENSCAFG00000020155	GFI1	100	62.972	ENSMALG00000014672	gfi1ab	100	61.647	Monopterus_albus
ENSCAFG00000020155	GFI1	100	87.707	MGP_CAROLIEiJ_G0027508	Gfi1	100	100.000	Mus_caroli
ENSCAFG00000020155	GFI1	100	87.234	ENSMUSG00000029275	Gfi1	100	87.234	Mus_musculus
ENSCAFG00000020155	GFI1	100	86.761	MGP_PahariEiJ_G0017280	Gfi1	100	100.000	Mus_pahari
ENSCAFG00000020155	GFI1	100	86.998	MGP_SPRETEiJ_G0028507	Gfi1	100	86.998	Mus_spretus
ENSCAFG00000020155	GFI1	100	86.019	ENSMPUG00000004178	GFI1	97	86.019	Mustela_putorius_furo
ENSCAFG00000020155	GFI1	100	90.566	ENSMLUG00000015191	GFI1	97	90.330	Myotis_lucifugus
ENSCAFG00000020155	GFI1	100	62.442	ENSNBRG00000015774	gfi1ab	100	60.369	Neolamprologus_brichardi
ENSCAFG00000020155	GFI1	93	91.560	ENSNLEG00000010470	GFI1	97	91.560	Nomascus_leucogenys
ENSCAFG00000020155	GFI1	100	91.232	ENSOPRG00000001473	GFI1	100	91.232	Ochotona_princeps
ENSCAFG00000020155	GFI1	100	63.084	ENSONIG00000019246	gfi1ab	100	62.150	Oreochromis_niloticus
ENSCAFG00000020155	GFI1	86	89.071	ENSOCUG00000023553	GFI1	93	90.164	Oryctolagus_cuniculus
ENSCAFG00000020155	GFI1	100	61.124	ENSORLG00000013806	gfi1ab	100	60.656	Oryzias_latipes
ENSCAFG00000020155	GFI1	100	59.016	ENSORLG00000005060	GFI1	100	58.879	Oryzias_latipes
ENSCAFG00000020155	GFI1	75	62.080	ENSORLG00020002817	GFI1	90	60.059	Oryzias_latipes_hni
ENSCAFG00000020155	GFI1	100	60.941	ENSORLG00020001602	gfi1ab	100	61.124	Oryzias_latipes_hni
ENSCAFG00000020155	GFI1	100	59.579	ENSORLG00015006070	GFI1	100	58.145	Oryzias_latipes_hsok
ENSCAFG00000020155	GFI1	100	58.837	ENSOMEG00000016722	GFI1	100	59.207	Oryzias_melastigma
ENSCAFG00000020155	GFI1	100	77.488	ENSOGAG00000027913	GFI1	100	78.199	Otolemur_garnettii
ENSCAFG00000020155	GFI1	69	97.143	ENSOARG00000016329	GFI1	94	97.143	Ovis_aries
ENSCAFG00000020155	GFI1	100	76.471	ENSPPAG00000042186	GFI1	100	67.062	Pan_paniscus
ENSCAFG00000020155	GFI1	100	97.630	ENSPPRG00000007521	GFI1	100	97.630	Panthera_pardus
ENSCAFG00000020155	GFI1	100	93.128	ENSPTRG00000043053	GFI1	100	93.128	Pan_troglodytes
ENSCAFG00000020155	GFI1	100	92.891	ENSPANG00000016433	GFI1	100	92.891	Papio_anubis
ENSCAFG00000020155	GFI1	100	65.899	ENSPKIG00000004263	GFI1	100	64.747	Paramormyrops_kingsleyae
ENSCAFG00000020155	GFI1	88	76.139	ENSPSIG00000008734	GFI1	97	76.139	Pelodiscus_sinensis
ENSCAFG00000020155	GFI1	100	58.726	ENSPMGG00000012546	gfi1ab	100	59.059	Periophthalmus_magnuspinnatus
ENSCAFG00000020155	GFI1	100	82.326	ENSPCIG00000013728	GFI1	100	81.628	Phascolarctos_cinereus
ENSCAFG00000020155	GFI1	100	61.111	ENSPFOG00000023214	gfi1ab	100	60.185	Poecilia_formosa
ENSCAFG00000020155	GFI1	100	61.111	ENSPLAG00000010879	gfi1ab	98	76.471	Poecilia_latipinna
ENSCAFG00000020155	GFI1	100	58.986	ENSPLAG00000005376	GFI1	91	60.606	Poecilia_latipinna
ENSCAFG00000020155	GFI1	100	58.986	ENSPMEG00000019299	GFI1	100	60.373	Poecilia_mexicana
ENSCAFG00000020155	GFI1	100	62.118	ENSPMEG00000013694	gfi1ab	100	61.882	Poecilia_mexicana
ENSCAFG00000020155	GFI1	100	54.795	ENSPREG00000007997	GFI1	93	82.564	Poecilia_reticulata
ENSCAFG00000020155	GFI1	100	62.093	ENSPREG00000014097	gfi1ab	100	61.395	Poecilia_reticulata
ENSCAFG00000020155	GFI1	100	79.765	ENSPCAG00000011020	GFI1	100	79.765	Procavia_capensis
ENSCAFG00000020155	GFI1	100	92.654	ENSPCOG00000020540	GFI1	100	92.654	Propithecus_coquereli
ENSCAFG00000020155	GFI1	100	88.626	ENSPVAG00000006928	GFI1	100	88.863	Pteropus_vampyrus
ENSCAFG00000020155	GFI1	100	63.170	ENSPNYG00000021183	gfi1ab	100	62.238	Pundamilia_nyererei
ENSCAFG00000020155	GFI1	100	55.684	ENSPNAG00000028014	GFI1	100	55.220	Pygocentrus_nattereri
ENSCAFG00000020155	GFI1	99	49.793	ENSPNAG00000014299	-	58	62.147	Pygocentrus_nattereri
ENSCAFG00000020155	GFI1	100	62.588	ENSPNAG00000027258	gfi1ab	100	60.656	Pygocentrus_nattereri
ENSCAFG00000020155	GFI1	100	86.998	ENSRNOG00000002042	Gfi1	100	86.998	Rattus_norvegicus
ENSCAFG00000020155	GFI1	100	92.891	ENSRBIG00000036467	GFI1	100	92.891	Rhinopithecus_bieti
ENSCAFG00000020155	GFI1	100	92.891	ENSRROG00000031687	GFI1	100	92.891	Rhinopithecus_roxellana
ENSCAFG00000020155	GFI1	100	91.706	ENSSBOG00000031300	GFI1	100	91.706	Saimiri_boliviensis_boliviensis
ENSCAFG00000020155	GFI1	100	67.056	ENSSFOG00015020295	gfi1	100	66.589	Scleropages_formosus
ENSCAFG00000020155	GFI1	100	62.295	ENSSMAG00000002782	gfi1ab	100	62.150	Scophthalmus_maximus
ENSCAFG00000020155	GFI1	100	62.353	ENSSDUG00000022410	gfi1ab	100	62.353	Seriola_dumerili
ENSCAFG00000020155	GFI1	100	62.588	ENSSLDG00000020163	gfi1ab	100	62.588	Seriola_lalandi_dorsalis
ENSCAFG00000020155	GFI1	82	76.471	ENSSPAG00000009140	gfi1ab	100	76.471	Stegastes_partitus
ENSCAFG00000020155	GFI1	100	94.787	ENSSSCG00000006902	GFI1	100	94.787	Sus_scrofa
ENSCAFG00000020155	GFI1	88	76.550	ENSTGUG00000006060	GFI1	100	76.550	Taeniopygia_guttata
ENSCAFG00000020155	GFI1	100	60.047	ENSTRUG00000000415	gfi1ab	100	59.813	Takifugu_rubripes
ENSCAFG00000020155	GFI1	100	60.798	ENSTNIG00000000651	gfi1ab	97	60.235	Tetraodon_nigroviridis
ENSCAFG00000020155	GFI1	100	94.076	ENSTTRG00000000082	GFI1	100	94.076	Tursiops_truncatus
ENSCAFG00000020155	GFI1	100	91.489	ENSUAMG00000021124	GFI1	91	91.726	Ursus_americanus
ENSCAFG00000020155	GFI1	100	68.868	ENSXETG00000023006	gfi1	98	68.322	Xenopus_tropicalis
ENSCAFG00000020155	GFI1	100	53.968	ENSXMAG00000009274	GFI1	70	53.125	Xiphophorus_maculatus
ENSCAFG00000020155	GFI1	100	61.628	ENSXMAG00000010523	gfi1ab	100	60.698	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000122	negative regulation of transcription by RNA polymerase II	-	IEA	Process
GO:0001227	DNA-binding transcription repressor activity, RNA polymerase II-specific	-	IEA	Function
GO:0010956	negative regulation of calcidiol 1-monooxygenase activity	-	IEA	Process
GO:0010977	negative regulation of neuron projection development	-	ISS	Process
GO:0016363	nuclear matrix	-	IEA	Component
GO:0016604	nuclear body	-	IEA	Component
GO:0017053	transcriptional repressor complex	-	ISS	Component
GO:0030097	hemopoiesis	-	IEA	Process
GO:0034121	regulation of toll-like receptor signaling pathway	-	IEA	Process
GO:0044212	transcription regulatory region DNA binding	-	IEA	Function
GO:0046872	metal ion binding	-	IEA	Function
GO:0051569	regulation of histone H3-K4 methylation	-	IEA	Process
GO:0070105	positive regulation of interleukin-6-mediated signaling pathway	-	IEA	Process
GO:0071222	cellular response to lipopolysaccharide	-	IEA	Process