EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCAFG00000020187 (Gene tree)
Gene ID: 479956
Gene Symbol: HFM1
Alias: -
Full Name: HFM1%2C ATP dependent DNA helicase homolog
Gene Type: protein_coding
Species: Canis_familiaris
Status: putative
Strand: Plus strand
Length: 101949 bases
Position: chr6:57435897-57537845
Accession: 41672
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00000029936	ResIII	PF04851.15	3.5e-11	1	1
ENSCAFP00000030621	ResIII	PF04851.15	3.6e-11	1	1
ENSCAFP00000029936	DEAD	PF00270.29	2.1e-26	1	1
ENSCAFP00000030621	DEAD	PF00270.29	2.2e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00000032148	-	4314	XM_005621938	ENSCAFP00000029936	1437 (aa)	XP_005621995	E2RA34
ENSCAFT00000035369	-	4567	XM_022420504	ENSCAFP00000030621	1466 (aa)	XP_022276212	E2R5U9

Gene Model

Click here to download ENSCAFG00000020187's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00000020187's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00000020187	HFM1	100	86.032	ENSG00000162669	HFM1	100	86.032	Homo_sapiens
ENSCAFG00000020187	HFM1	58	65.362	ENSAPOG00000005304	hfm1	95	65.362	Acanthochromis_polyacanthus
ENSCAFG00000020187	HFM1	100	92.083	ENSAMEG00000000432	HFM1	100	92.083	Ailuropoda_melanoleuca
ENSCAFG00000020187	HFM1	73	57.739	ENSACIG00000021553	hfm1	93	59.483	Amphilophus_citrinellus
ENSCAFG00000020187	HFM1	58	65.755	ENSAOCG00000022839	hfm1	96	68.561	Amphiprion_ocellaris
ENSCAFG00000020187	HFM1	55	68.608	ENSAPEG00000014316	hfm1	96	68.608	Amphiprion_percula
ENSCAFG00000020187	HFM1	72	59.598	ENSATEG00000019181	hfm1	91	58.607	Anabas_testudineus
ENSCAFG00000020187	HFM1	100	61.218	ENSAPLG00000013639	HFM1	100	61.218	Anas_platyrhynchos
ENSCAFG00000020187	HFM1	100	82.859	ENSANAG00000029513	HFM1	100	82.859	Aotus_nancymaae
ENSCAFG00000020187	HFM1	64	63.237	ENSACLG00000009033	hfm1	96	65.186	Astatotilapia_calliptera
ENSCAFG00000020187	HFM1	91	52.470	ENSAMXG00000006108	hfm1	92	52.470	Astyanax_mexicanus
ENSCAFG00000020187	HFM1	100	86.032	ENSBTAG00000020856	HFM1	100	86.032	Bos_taurus
ENSCAFG00000020187	HFM1	100	84.573	ENSCJAG00000001843	HFM1	100	84.573	Callithrix_jacchus
ENSCAFG00000020187	HFM1	100	84.039	ENSTSYG00000014250	HFM1	100	84.039	Carlito_syrichta
ENSCAFG00000020187	HFM1	99	79.083	ENSCPOG00000007421	HFM1	99	79.083	Cavia_porcellus
ENSCAFG00000020187	HFM1	100	84.503	ENSCCAG00000033206	HFM1	100	84.503	Cebus_capucinus
ENSCAFG00000020187	HFM1	100	85.407	ENSCATG00000030987	HFM1	100	85.407	Cercocebus_atys
ENSCAFG00000020187	HFM1	99	82.067	ENSCLAG00000005173	HFM1	98	82.067	Chinchilla_lanigera
ENSCAFG00000020187	HFM1	68	90.789	ENSCHOG00000011824	-	77	90.789	Choloepus_hoffmanni
ENSCAFG00000020187	HFM1	100	72.099	ENSCGRG00001016995	Hfm1	100	72.099	Cricetulus_griseus_chok1gshd
ENSCAFG00000020187	HFM1	100	76.389	ENSCGRG00000017181	Hfm1	100	76.389	Cricetulus_griseus_crigri
ENSCAFG00000020187	HFM1	71	59.087	ENSCSEG00000017659	hfm1	94	59.087	Cynoglossus_semilaevis
ENSCAFG00000020187	HFM1	79	54.490	ENSDARG00000104288	hfm1	99	54.490	Danio_rerio
ENSCAFG00000020187	HFM1	99	82.148	ENSDNOG00000004776	HFM1	99	82.148	Dasypus_novemcinctus
ENSCAFG00000020187	HFM1	100	77.023	ENSDORG00000014661	Hfm1	100	77.023	Dipodomys_ordii
ENSCAFG00000020187	HFM1	72	85.606	ENSEASG00005015424	HFM1	97	86.726	Equus_asinus_asinus
ENSCAFG00000020187	HFM1	99	88.139	ENSECAG00000024039	HFM1	99	88.139	Equus_caballus
ENSCAFG00000020187	HFM1	63	67.363	ENSELUG00000018944	hfm1	97	67.363	Esox_lucius
ENSCAFG00000020187	HFM1	100	91.319	ENSFCAG00000029116	HFM1	100	91.319	Felis_catus
ENSCAFG00000020187	HFM1	100	60.000	ENSFALG00000001781	HFM1	100	60.616	Ficedula_albicollis
ENSCAFG00000020187	HFM1	99	80.586	ENSFDAG00000020816	HFM1	99	80.586	Fukomys_damarensis
ENSCAFG00000020187	HFM1	66	61.442	ENSGMOG00000017436	hfm1	100	61.442	Gadus_morhua
ENSCAFG00000020187	HFM1	71	61.375	ENSGAFG00000018093	hfm1	92	67.397	Gambusia_affinis
ENSCAFG00000020187	HFM1	66	61.850	ENSGACG00000015686	hfm1	100	61.850	Gasterosteus_aculeatus
ENSCAFG00000020187	HFM1	100	85.893	ENSGGOG00000038524	HFM1	100	85.893	Gorilla_gorilla
ENSCAFG00000020187	HFM1	64	64.662	ENSHBUG00000007309	hfm1	96	59.733	Haplochromis_burtoni
ENSCAFG00000020187	HFM1	56	63.804	ENSHCOG00000019632	hfm1	97	63.804	Hippocampus_comes
ENSCAFG00000020187	HFM1	65	64.995	ENSIPUG00000017020	hfm1	92	65.871	Ictalurus_punctatus
ENSCAFG00000020187	HFM1	100	76.597	ENSJJAG00000017198	Hfm1	99	80.236	Jaculus_jaculus
ENSCAFG00000020187	HFM1	62	62.930	ENSKMAG00000002282	hfm1	99	58.930	Kryptolebias_marmoratus
ENSCAFG00000020187	HFM1	73	59.001	ENSLBEG00000006759	hfm1	96	65.550	Labrus_bergylta
ENSCAFG00000020187	HFM1	72	65.648	ENSLACG00000010698	HFM1	100	65.794	Latimeria_chalumnae
ENSCAFG00000020187	HFM1	76	61.477	ENSLOCG00000004931	hfm1	99	63.318	Lepisosteus_oculatus
ENSCAFG00000020187	HFM1	52	89.906	ENSLAFG00000015903	-	99	89.906	Loxodonta_africana
ENSCAFG00000020187	HFM1	100	82.316	ENSMFAG00000003649	HFM1	100	82.316	Macaca_fascicularis
ENSCAFG00000020187	HFM1	100	84.781	ENSMMUG00000006819	HFM1	100	84.781	Macaca_mulatta
ENSCAFG00000020187	HFM1	54	69.794	ENSMAMG00000004623	hfm1	97	66.264	Mastacembelus_armatus
ENSCAFG00000020187	HFM1	71	58.246	ENSMZEG00005004679	hfm1	96	65.186	Maylandia_zebra
ENSCAFG00000020187	HFM1	54	78.571	ENSMGAG00000008437	HFM1	98	78.571	Meleagris_gallopavo
ENSCAFG00000020187	HFM1	100	76.544	ENSMAUG00000018858	Hfm1	100	76.544	Mesocricetus_auratus
ENSCAFG00000020187	HFM1	100	84.594	ENSMICG00000037935	HFM1	100	84.594	Microcebus_murinus
ENSCAFG00000020187	HFM1	100	75.191	ENSMOCG00000014812	Hfm1	100	75.191	Microtus_ochrogaster
ENSCAFG00000020187	HFM1	62	63.524	ENSMMOG00000006148	hfm1	96	63.647	Mola_mola
ENSCAFG00000020187	HFM1	65	63.501	ENSMALG00000002401	hfm1	94	66.627	Monopterus_albus
ENSCAFG00000020187	HFM1	96	72.960	MGP_CAROLIEiJ_G0027496	Hfm1	99	72.960	Mus_caroli
ENSCAFG00000020187	HFM1	100	75.678	ENSMUSG00000043410	Hfm1	100	75.678	Mus_musculus
ENSCAFG00000020187	HFM1	100	75.261	MGP_PahariEiJ_G0017268	Hfm1	100	75.261	Mus_pahari
ENSCAFG00000020187	HFM1	100	75.330	MGP_SPRETEiJ_G0028495	Hfm1	100	75.330	Mus_spretus
ENSCAFG00000020187	HFM1	99	90.252	ENSMPUG00000004594	HFM1	99	90.252	Mustela_putorius_furo
ENSCAFG00000020187	HFM1	100	84.913	ENSMLUG00000010200	HFM1	100	84.913	Myotis_lucifugus
ENSCAFG00000020187	HFM1	71	55.778	ENSNBRG00000002910	hfm1	97	65.291	Neolamprologus_brichardi
ENSCAFG00000020187	HFM1	100	81.856	ENSNLEG00000010285	HFM1	100	81.856	Nomascus_leucogenys
ENSCAFG00000020187	HFM1	84	67.816	ENSMEUG00000015788	HFM1	84	67.816	Notamacropus_eugenii
ENSCAFG00000020187	HFM1	84	76.732	ENSOPRG00000013916	HFM1	84	76.732	Ochotona_princeps
ENSCAFG00000020187	HFM1	71	61.412	ENSONIG00000010590	hfm1	99	61.627	Oreochromis_niloticus
ENSCAFG00000020187	HFM1	56	65.025	ENSORLG00000026844	hfm1	99	65.025	Oryzias_latipes
ENSCAFG00000020187	HFM1	66	56.334	ENSORLG00020002951	hfm1	99	48.134	Oryzias_latipes_hni
ENSCAFG00000020187	HFM1	74	58.114	ENSOMEG00000016474	hfm1	90	51.116	Oryzias_melastigma
ENSCAFG00000020187	HFM1	85	87.031	ENSOGAG00000032369	HFM1	99	87.031	Otolemur_garnettii
ENSCAFG00000020187	HFM1	100	86.111	ENSOARG00000015812	HFM1	100	86.111	Ovis_aries
ENSCAFG00000020187	HFM1	92	87.330	ENSPPAG00000024582	HFM1	99	87.330	Pan_paniscus
ENSCAFG00000020187	HFM1	100	91.528	ENSPPRG00000003270	HFM1	100	91.528	Panthera_pardus
ENSCAFG00000020187	HFM1	100	91.458	ENSPTIG00000018881	HFM1	100	91.458	Panthera_tigris_altaica
ENSCAFG00000020187	HFM1	100	86.101	ENSPTRG00000000948	HFM1	100	86.101	Pan_troglodytes
ENSCAFG00000020187	HFM1	100	85.129	ENSPANG00000009838	HFM1	100	85.129	Papio_anubis
ENSCAFG00000020187	HFM1	63	66.851	ENSPKIG00000003810	hfm1	95	68.210	Paramormyrops_kingsleyae
ENSCAFG00000020187	HFM1	57	65.012	ENSPMGG00000011059	hfm1	100	65.012	Periophthalmus_magnuspinnatus
ENSCAFG00000020187	HFM1	100	77.623	ENSPEMG00000022852	Hfm1	100	77.623	Peromyscus_maniculatus_bairdii
ENSCAFG00000020187	HFM1	99	68.188	ENSPCIG00000014233	HFM1	99	68.188	Phascolarctos_cinereus
ENSCAFG00000020187	HFM1	72	61.603	ENSPFOG00000017194	hfm1	100	62.252	Poecilia_formosa
ENSCAFG00000020187	HFM1	73	61.660	ENSPLAG00000000571	hfm1	92	63.592	Poecilia_latipinna
ENSCAFG00000020187	HFM1	73	61.296	ENSPMEG00000019475	hfm1	93	63.198	Poecilia_mexicana
ENSCAFG00000020187	HFM1	71	63.137	ENSPREG00000007803	hfm1	92	66.748	Poecilia_reticulata
ENSCAFG00000020187	HFM1	100	85.823	ENSPPYG00000001163	HFM1	100	85.823	Pongo_abelii
ENSCAFG00000020187	HFM1	74	83.051	ENSPCAG00000004289	-	74	83.051	Procavia_capensis
ENSCAFG00000020187	HFM1	100	77.623	ENSPVAG00000009713	HFM1	100	77.623	Pteropus_vampyrus
ENSCAFG00000020187	HFM1	64	63.130	ENSPNYG00000001795	hfm1	96	65.186	Pundamilia_nyererei
ENSCAFG00000020187	HFM1	59	67.574	ENSPNAG00000010865	hfm1	84	67.574	Pygocentrus_nattereri
ENSCAFG00000020187	HFM1	100	74.218	ENSRNOG00000023299	Hfm1	100	74.218	Rattus_norvegicus
ENSCAFG00000020187	HFM1	100	85.198	ENSRROG00000045569	HFM1	100	85.198	Rhinopithecus_roxellana
ENSCAFG00000020187	HFM1	100	82.349	ENSSBOG00000027456	HFM1	100	82.349	Saimiri_boliviensis_boliviensis
ENSCAFG00000020187	HFM1	60	72.055	ENSSHAG00000014616	-	98	72.055	Sarcophilus_harrisii
ENSCAFG00000020187	HFM1	93	52.635	ENSSFOG00015020129	hfm1	93	55.994	Scleropages_formosus
ENSCAFG00000020187	HFM1	62	65.548	ENSSMAG00000006907	hfm1	87	65.548	Scophthalmus_maximus
ENSCAFG00000020187	HFM1	57	66.223	ENSSDUG00000011424	hfm1	93	66.223	Seriola_dumerili
ENSCAFG00000020187	HFM1	57	66.345	ENSSLDG00000016386	hfm1	92	66.345	Seriola_lalandi_dorsalis
ENSCAFG00000020187	HFM1	68	58.158	ENSSPAG00000001023	hfm1	95	66.114	Stegastes_partitus
ENSCAFG00000020187	HFM1	99	84.610	ENSSSCG00000006912	HFM1	98	86.533	Sus_scrofa
ENSCAFG00000020187	HFM1	66	75.862	ENSTGUG00000006172	HFM1	100	75.862	Taeniopygia_guttata
ENSCAFG00000020187	HFM1	100	82.361	ENSTTRG00000013933	HFM1	100	82.361	Tursiops_truncatus
ENSCAFG00000020187	HFM1	93	85.333	ENSVPAG00000011331	HFM1	93	85.333	Vicugna_pacos
ENSCAFG00000020187	HFM1	72	90.616	ENSVVUG00000020760	HFM1	96	97.380	Vulpes_vulpes
ENSCAFG00000020187	HFM1	57	67.600	ENSXMAG00000004178	hfm1	91	67.600	Xiphophorus_maculatus