EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAFG00000023007 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: zinc finger protein 500
Gene Type: protein_coding
Species: Canis_familiaris
Status: putative
Strand: Plus strand
Length: 6900 bases
Position: chr6:36655169-36662068
Accession: 490023
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00000028299	zf-C2H2	PF00096.26	1.7e-30	1	5
ENSCAFP00000028299	zf-C2H2	PF00096.26	1.7e-30	2	5
ENSCAFP00000028299	zf-C2H2	PF00096.26	1.7e-30	3	5
ENSCAFP00000028299	zf-C2H2	PF00096.26	1.7e-30	4	5
ENSCAFP00000028299	zf-C2H2	PF00096.26	1.7e-30	5	5
ENSCAFP00000028299	zf-met	PF12874.7	0.00035	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00000030459	-	1665	XM_005621590	ENSCAFP00000028299	279 (aa)	XP_005621647	F1Q138

Gene Model

Click here to download ENSCAFG00000023007's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00000023007's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAFG00000023007	-	79	48.529	ENSCAFG00000031888	ZNF200	67	48.529
ENSCAFG00000023007	-	53	38.462	ENSCAFG00000004179	PRDM5	80	38.462
ENSCAFG00000023007	-	79	58.163	ENSCAFG00000031471	-	95	58.163
ENSCAFG00000023007	-	51	58.772	ENSCAFG00000029649	-	99	58.772
ENSCAFG00000023007	-	54	54.676	ENSCAFG00000032330	-	91	54.676
ENSCAFG00000023007	-	80	57.391	ENSCAFG00000029340	-	99	57.391
ENSCAFG00000023007	-	51	53.333	ENSCAFG00000018071	ZNF317	82	53.333
ENSCAFG00000023007	-	63	45.833	ENSCAFG00000008559	ZNF319	91	45.833
ENSCAFG00000023007	-	80	57.895	ENSCAFG00000029288	-	98	57.895
ENSCAFG00000023007	-	53	41.379	ENSCAFG00000016964	MAZ	53	35.862
ENSCAFG00000023007	-	59	60.993	ENSCAFG00000031857	ZNF235	67	60.993
ENSCAFG00000023007	-	77	38.596	ENSCAFG00000029228	ZNF770	79	38.596
ENSCAFG00000023007	-	51	46.552	ENSCAFG00000002564	ZNF865	60	46.552
ENSCAFG00000023007	-	66	50.602	ENSCAFG00000002561	-	92	50.602
ENSCAFG00000023007	-	51	58.156	ENSCAFG00000032037	-	100	58.156
ENSCAFG00000023007	-	53	53.901	ENSCAFG00000015170	ZNF81	66	53.901
ENSCAFG00000023007	-	51	60.241	ENSCAFG00000029911	ZNF768	52	60.241
ENSCAFG00000023007	-	80	54.610	ENSCAFG00000032123	-	99	54.610
ENSCAFG00000023007	-	69	55.319	ENSCAFG00000030117	ZNF599	70	55.319
ENSCAFG00000023007	-	61	49.107	ENSCAFG00000004926	ZNF574	54	49.123
ENSCAFG00000023007	-	66	56.738	ENSCAFG00000028550	-	92	56.738
ENSCAFG00000023007	-	62	58.865	ENSCAFG00000029028	ZNF226	72	58.865
ENSCAFG00000023007	-	52	42.683	ENSCAFG00000006638	SNAI2	54	42.683
ENSCAFG00000023007	-	85	57.447	ENSCAFG00000030057	ZNF234	98	57.447
ENSCAFG00000023007	-	80	56.738	ENSCAFG00000020085	ZFP1	99	56.738
ENSCAFG00000023007	-	51	49.091	ENSCAFG00000000017	ZNF236	50	49.091
ENSCAFG00000023007	-	53	38.824	ENSCAFG00000006794	GTF3A	58	38.824

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00000023007	-	84	64.202	ENSCJAG00000019885	ZNF500	53	64.479	Callithrix_jacchus
ENSCAFG00000023007	-	100	100.000	ENSCAFG00020024945	-	100	100.000	Canis_lupus_dingo
ENSCAFG00000023007	-	55	58.559	ENSGAGG00000006848	-	55	58.559	Gopherus_agassizii