EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAFG00000023076 (Gene tree)
Gene ID: -
Gene Symbol: PRDM12
Alias: -
Full Name: PR/SET domain 12
Gene Type: protein_coding
Species: Canis_familiaris
Status: putative
Strand: Minus strand
Length: 14165 bases
Position: chr9:53284455-53298619
Accession: 55789
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00000030461	zf-C2H2	PF00096.26	4.9e-13	1	2
ENSCAFP00000030461	zf-C2H2	PF00096.26	4.9e-13	2	2
ENSCAFP00000030461	zf-met	PF12874.7	4.2e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00000035225	-	969	XM_005625442	ENSCAFP00000030461	322 (aa)	-	F1Q2W7

Gene Model

Click here to download ENSCAFG00000023076's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00000023076's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAFG00000023076	PRDM12	64	44.737	ENSCAFG00000004179	PRDM5	95	44.444

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00000023076	PRDM12	99	97.222	ENSG00000130711	PRDM12	88	97.222	Homo_sapiens
ENSCAFG00000023076	PRDM12	99	74.269	ENSAPOG00000016051	prdm12b	81	78.526	Acanthochromis_polyacanthus
ENSCAFG00000023076	PRDM12	95	65.495	ENSAPOG00000018234	-	80	67.586	Acanthochromis_polyacanthus
ENSCAFG00000023076	PRDM12	88	93.262	ENSAMEG00000016234	PRDM12	87	93.262	Ailuropoda_melanoleuca
ENSCAFG00000023076	PRDM12	98	78.704	ENSACIG00000005193	-	79	82.060	Amphilophus_citrinellus
ENSCAFG00000023076	PRDM12	99	73.887	ENSACIG00000019578	prdm12b	82	79.805	Amphilophus_citrinellus
ENSCAFG00000023076	PRDM12	99	75.740	ENSAOCG00000015040	prdm12b	81	80.195	Amphiprion_ocellaris
ENSCAFG00000023076	PRDM12	98	74.691	ENSAPEG00000022849	-	78	79.933	Amphiprion_percula
ENSCAFG00000023076	PRDM12	99	76.418	ENSAPEG00000015092	prdm12b	81	80.984	Amphiprion_percula
ENSCAFG00000023076	PRDM12	99	75.439	ENSATEG00000014595	-	83	83.916	Anabas_testudineus
ENSCAFG00000023076	PRDM12	92	98.316	ENSANAG00000020616	PRDM12	87	98.316	Aotus_nancymaae
ENSCAFG00000023076	PRDM12	85	85.512	ENSACLG00000007631	-	76	82.333	Astatotilapia_calliptera
ENSCAFG00000023076	PRDM12	99	77.846	ENSACLG00000011876	prdm12b	80	82.653	Astatotilapia_calliptera
ENSCAFG00000023076	PRDM12	99	82.622	ENSAMXG00000033665	prdm12b	79	89.384	Astyanax_mexicanus
ENSCAFG00000023076	PRDM12	99	78.505	ENSAMXG00000008540	PRDM12	78	84.859	Astyanax_mexicanus
ENSCAFG00000023076	PRDM12	99	97.819	ENSBTAG00000023797	PRDM12	88	97.819	Bos_taurus
ENSCAFG00000023076	PRDM12	99	97.196	ENSCJAG00000020540	PRDM12	88	97.196	Callithrix_jacchus
ENSCAFG00000023076	PRDM12	99	99.065	ENSCAFG00020024046	PRDM12	88	99.065	Canis_lupus_dingo
ENSCAFG00000023076	PRDM12	99	98.442	ENSCHIG00000025005	PRDM12	88	98.442	Capra_hircus
ENSCAFG00000023076	PRDM12	92	90.236	ENSCPOG00000005901	PRDM12	82	96.667	Cavia_porcellus
ENSCAFG00000023076	PRDM12	99	98.131	ENSCCAG00000037485	PRDM12	88	98.131	Cebus_capucinus
ENSCAFG00000023076	PRDM12	99	98.131	ENSCATG00000020327	PRDM12	88	98.131	Cercocebus_atys
ENSCAFG00000023076	PRDM12	90	96.564	ENSCLAG00000005499	PRDM12	80	96.564	Chinchilla_lanigera
ENSCAFG00000023076	PRDM12	99	98.442	ENSCSAG00000014756	PRDM12	88	98.442	Chlorocebus_sabaeus
ENSCAFG00000023076	PRDM12	99	88.474	ENSCPBG00000022628	PRDM12	82	92.784	Chrysemys_picta_bellii
ENSCAFG00000023076	PRDM12	99	97.523	ENSCGRG00001015005	Prdm12	88	97.523	Cricetulus_griseus_chok1gshd
ENSCAFG00000023076	PRDM12	99	73.066	ENSCVAG00000000944	-	80	79.032	Cyprinodon_variegatus
ENSCAFG00000023076	PRDM12	99	77.039	ENSCVAG00000017166	prdm12b	81	82.609	Cyprinodon_variegatus
ENSCAFG00000023076	PRDM12	99	81.138	ENSDARG00000007430	prdm12b	82	86.667	Danio_rerio
ENSCAFG00000023076	PRDM12	99	97.214	ENSDNOG00000042302	PRDM12	88	97.214	Dasypus_novemcinctus
ENSCAFG00000023076	PRDM12	76	70.221	ENSEBUG00000016780	prdm12b	69	67.101	Eptatretus_burgeri
ENSCAFG00000023076	PRDM12	99	97.819	ENSEASG00005008472	PRDM12	88	97.819	Equus_asinus_asinus
ENSCAFG00000023076	PRDM12	99	97.508	ENSECAG00000005933	PRDM12	88	97.508	Equus_caballus
ENSCAFG00000023076	PRDM12	99	75.617	ENSELUG00000013674	PRDM12	77	84.043	Esox_lucius
ENSCAFG00000023076	PRDM12	99	79.403	ENSELUG00000009905	prdm12b	79	85.374	Esox_lucius
ENSCAFG00000023076	PRDM12	99	98.754	ENSFCAG00000043086	PRDM12	88	98.754	Felis_catus
ENSCAFG00000023076	PRDM12	99	89.097	ENSFALG00000001445	PRDM12	73	93.471	Ficedula_albicollis
ENSCAFG00000023076	PRDM12	99	76.647	ENSFHEG00000003944	prdm12b	81	81.788	Fundulus_heteroclitus
ENSCAFG00000023076	PRDM12	96	78.438	ENSFHEG00000007746	-	76	82.192	Fundulus_heteroclitus
ENSCAFG00000023076	PRDM12	90	83.162	ENSGMOG00000011797	prdm12b	82	83.162	Gadus_morhua
ENSCAFG00000023076	PRDM12	99	89.097	ENSGALG00000003895	PRDM12	82	93.471	Gallus_gallus
ENSCAFG00000023076	PRDM12	99	77.410	ENSGAFG00000010827	prdm12b	79	83.446	Gambusia_affinis
ENSCAFG00000023076	PRDM12	99	77.879	ENSGACG00000016713	prdm12b	79	83.729	Gasterosteus_aculeatus
ENSCAFG00000023076	PRDM12	99	88.785	ENSGAGG00000014083	PRDM12	82	93.127	Gopherus_agassizii
ENSCAFG00000023076	PRDM12	99	97.214	ENSGGOG00000010568	PRDM12	88	97.214	Gorilla_gorilla
ENSCAFG00000023076	PRDM12	85	85.512	ENSHBUG00000022537	-	71	82.333	Haplochromis_burtoni
ENSCAFG00000023076	PRDM12	99	76.190	ENSHBUG00000022878	prdm12b	81	80.656	Haplochromis_burtoni
ENSCAFG00000023076	PRDM12	90	96.552	ENSHGLG00000013939	PRDM12	80	96.220	Heterocephalus_glaber_female
ENSCAFG00000023076	PRDM12	87	81.695	ENSHCOG00000003663	prdm12b	77	80.795	Hippocampus_comes
ENSCAFG00000023076	PRDM12	96	78.247	ENSHCOG00000021167	-	77	82.734	Hippocampus_comes
ENSCAFG00000023076	PRDM12	99	82.121	ENSIPUG00000017053	prdm12b	79	88.316	Ictalurus_punctatus
ENSCAFG00000023076	PRDM12	95	78.964	ENSIPUG00000019544	PRDM12	76	87.037	Ictalurus_punctatus
ENSCAFG00000023076	PRDM12	99	93.417	ENSSTOG00000005986	PRDM12	76	98.282	Ictidomys_tridecemlineatus
ENSCAFG00000023076	PRDM12	89	97.909	ENSJJAG00000005424	Prdm12	87	97.909	Jaculus_jaculus
ENSCAFG00000023076	PRDM12	89	77.848	ENSKMAG00000016921	prdm12b	78	78.165	Kryptolebias_marmoratus
ENSCAFG00000023076	PRDM12	99	77.607	ENSKMAG00000021205	-	80	84.266	Kryptolebias_marmoratus
ENSCAFG00000023076	PRDM12	99	75.146	ENSLBEG00000007776	-	77	82.935	Labrus_bergylta
ENSCAFG00000023076	PRDM12	99	75.893	ENSLBEG00000017769	prdm12b	77	84.247	Labrus_bergylta
ENSCAFG00000023076	PRDM12	99	85.981	ENSLACG00000017560	PRDM12	82	90.034	Latimeria_chalumnae
ENSCAFG00000023076	PRDM12	99	80.734	ENSLOCG00000005429	prdm12b	82	86.532	Lepisosteus_oculatus
ENSCAFG00000023076	PRDM12	90	96.970	ENSLAFG00000006979	PRDM12	80	96.970	Loxodonta_africana
ENSCAFG00000023076	PRDM12	99	95.370	ENSMFAG00000040322	PRDM12	88	95.370	Macaca_fascicularis
ENSCAFG00000023076	PRDM12	99	98.131	ENSMNEG00000037234	PRDM12	88	98.131	Macaca_nemestrina
ENSCAFG00000023076	PRDM12	99	75.953	ENSMAMG00000013212	prdm12b	79	84.068	Mastacembelus_armatus
ENSCAFG00000023076	PRDM12	85	86.182	ENSMAMG00000018988	-	75	82.935	Mastacembelus_armatus
ENSCAFG00000023076	PRDM12	85	85.512	ENSMZEG00005000415	PRDM12	76	82.333	Maylandia_zebra
ENSCAFG00000023076	PRDM12	93	93.289	ENSMGAG00000005438	PRDM12	82	93.471	Meleagris_gallopavo
ENSCAFG00000023076	PRDM12	99	95.652	ENSMAUG00000013040	Prdm12	80	97.595	Mesocricetus_auratus
ENSCAFG00000023076	PRDM12	99	97.196	ENSMICG00000015480	PRDM12	88	97.196	Microcebus_murinus
ENSCAFG00000023076	PRDM12	98	93.671	ENSMOCG00000021026	Prdm12	82	97.659	Microtus_ochrogaster
ENSCAFG00000023076	PRDM12	99	90.654	ENSMODG00000012108	PRDM12	82	95.189	Monodelphis_domestica
ENSCAFG00000023076	PRDM12	95	74.841	ENSMALG00000021901	prdm12b	84	81.818	Monopterus_albus
ENSCAFG00000023076	PRDM12	99	97.516	MGP_CAROLIEiJ_G0023414	Prdm12	88	97.516	Mus_caroli
ENSCAFG00000023076	PRDM12	99	97.516	ENSMUSG00000079466	Prdm12	88	97.516	Mus_musculus
ENSCAFG00000023076	PRDM12	99	97.516	MGP_PahariEiJ_G0024871	Prdm12	88	97.516	Mus_pahari
ENSCAFG00000023076	PRDM12	99	97.516	MGP_SPRETEiJ_G0024331	Prdm12	88	97.516	Mus_spretus
ENSCAFG00000023076	PRDM12	88	97.535	ENSNGAG00000018480	Prdm12	82	97.561	Nannospalax_galili
ENSCAFG00000023076	PRDM12	98	74.286	ENSNBRG00000024312	-	78	79.505	Neolamprologus_brichardi
ENSCAFG00000023076	PRDM12	99	74.852	ENSNBRG00000006727	prdm12b	82	79.870	Neolamprologus_brichardi
ENSCAFG00000023076	PRDM12	99	79.128	ENSMEUG00000003828	PRDM12	82	82.474	Notamacropus_eugenii
ENSCAFG00000023076	PRDM12	89	97.561	ENSOPRG00000008680	PRDM12	87	97.561	Ochotona_princeps
ENSCAFG00000023076	PRDM12	93	97.000	ENSODEG00000016282	PRDM12	56	97.000	Octodon_degus
ENSCAFG00000023076	PRDM12	70	89.868	ENSOANG00000001043	PRDM12	91	96.954	Ornithorhynchus_anatinus
ENSCAFG00000023076	PRDM12	91	94.539	ENSOCUG00000008241	PRDM12	91	95.789	Oryctolagus_cuniculus
ENSCAFG00000023076	PRDM12	99	75.221	ENSORLG00000007114	prdm12b	80	80.592	Oryzias_latipes
ENSCAFG00000023076	PRDM12	88	81.605	ENSORLG00000017558	-	77	81.940	Oryzias_latipes
ENSCAFG00000023076	PRDM12	88	81.333	ENSORLG00020013167	-	77	81.667	Oryzias_latipes_hni
ENSCAFG00000023076	PRDM12	99	74.556	ENSORLG00020019565	prdm12b	80	80.263	Oryzias_latipes_hni
ENSCAFG00000023076	PRDM12	89	79.934	ENSORLG00015007621	prdm12b	80	79.934	Oryzias_latipes_hsok
ENSCAFG00000023076	PRDM12	88	81.605	ENSORLG00015003435	-	77	81.940	Oryzias_latipes_hsok
ENSCAFG00000023076	PRDM12	99	75.976	ENSOMEG00000007762	-	80	81.879	Oryzias_melastigma
ENSCAFG00000023076	PRDM12	99	74.487	ENSOMEG00000004134	prdm12b	80	80.130	Oryzias_melastigma
ENSCAFG00000023076	PRDM12	90	98.966	ENSOGAG00000007557	PRDM12	87	98.966	Otolemur_garnettii
ENSCAFG00000023076	PRDM12	76	97.131	ENSPPAG00000031506	-	85	95.200	Pan_paniscus
ENSCAFG00000023076	PRDM12	99	84.783	ENSPPRG00000023024	PRDM12	74	88.699	Panthera_pardus
ENSCAFG00000023076	PRDM12	99	97.523	ENSPTRG00000021475	PRDM12	88	97.523	Pan_troglodytes
ENSCAFG00000023076	PRDM12	99	97.523	ENSPTRG00000043324	-	88	97.523	Pan_troglodytes
ENSCAFG00000023076	PRDM12	99	98.131	ENSPANG00000025967	PRDM12	88	98.131	Papio_anubis
ENSCAFG00000023076	PRDM12	99	80.060	ENSPKIG00000007228	prdm12b	82	85.621	Paramormyrops_kingsleyae
ENSCAFG00000023076	PRDM12	93	78.571	ENSPKIG00000004305	PRDM12	82	81.100	Paramormyrops_kingsleyae
ENSCAFG00000023076	PRDM12	99	87.850	ENSPSIG00000006739	PRDM12	82	92.096	Pelodiscus_sinensis
ENSCAFG00000023076	PRDM12	99	74.556	ENSPMGG00000002356	-	76	83.162	Periophthalmus_magnuspinnatus
ENSCAFG00000023076	PRDM12	99	77.576	ENSPMGG00000008867	prdm12b	80	83.333	Periophthalmus_magnuspinnatus
ENSCAFG00000023076	PRDM12	94	94.408	ENSPEMG00000009969	Prdm12	79	97.924	Peromyscus_maniculatus_bairdii
ENSCAFG00000023076	PRDM12	99	90.966	ENSPCIG00000024119	PRDM12	82	95.533	Phascolarctos_cinereus
ENSCAFG00000023076	PRDM12	99	77.477	ENSPFOG00000019841	prdm12b	82	82.392	Poecilia_formosa
ENSCAFG00000023076	PRDM12	89	83.959	ENSPLAG00000016626	prdm12b	78	83.446	Poecilia_latipinna
ENSCAFG00000023076	PRDM12	99	77.313	ENSPMEG00000016698	prdm12b	80	83.446	Poecilia_mexicana
ENSCAFG00000023076	PRDM12	99	76.991	ENSPREG00000015073	prdm12b	78	83.278	Poecilia_reticulata
ENSCAFG00000023076	PRDM12	96	79.221	ENSPREG00000003211	-	81	80.743	Poecilia_reticulata
ENSCAFG00000023076	PRDM12	96	95.779	ENSPPYG00000019694	PRDM12	83	97.595	Pongo_abelii
ENSCAFG00000023076	PRDM12	99	98.142	ENSPCOG00000022255	PRDM12	88	98.142	Propithecus_coquereli
ENSCAFG00000023076	PRDM12	99	97.214	ENSPVAG00000001511	PRDM12	88	97.214	Pteropus_vampyrus
ENSCAFG00000023076	PRDM12	99	75.740	ENSPNYG00000009607	prdm12b	82	80.130	Pundamilia_nyererei
ENSCAFG00000023076	PRDM12	85	85.512	ENSPNYG00000013589	-	76	82.333	Pundamilia_nyererei
ENSCAFG00000023076	PRDM12	99	82.477	ENSPNAG00000024532	prdm12b	79	89.726	Pygocentrus_nattereri
ENSCAFG00000023076	PRDM12	99	75.152	ENSPNAG00000013396	PRDM12	77	81.882	Pygocentrus_nattereri
ENSCAFG00000023076	PRDM12	99	97.516	ENSRNOG00000009218	Prdm12	88	97.516	Rattus_norvegicus
ENSCAFG00000023076	PRDM12	85	98.175	ENSRBIG00000042712	PRDM12	79	95.455	Rhinopithecus_bieti
ENSCAFG00000023076	PRDM12	86	98.201	ENSRROG00000043554	PRDM12	87	98.201	Rhinopithecus_roxellana
ENSCAFG00000023076	PRDM12	99	90.062	ENSSHAG00000015972	PRDM12	82	94.521	Sarcophilus_harrisii
ENSCAFG00000023076	PRDM12	99	73.199	ENSSMAG00000003754	prdm12b	79	79.935	Scophthalmus_maximus
ENSCAFG00000023076	PRDM12	92	82.724	ENSSDUG00000019071	-	78	85.211	Seriola_dumerili
ENSCAFG00000023076	PRDM12	99	74.927	ENSSDUG00000023498	prdm12b	79	81.250	Seriola_dumerili
ENSCAFG00000023076	PRDM12	99	79.257	ENSSLDG00000013562	-	81	86.219	Seriola_lalandi_dorsalis
ENSCAFG00000023076	PRDM12	99	75.294	ENSSLDG00000009557	prdm12b	79	82.060	Seriola_lalandi_dorsalis
ENSCAFG00000023076	PRDM12	99	88.162	ENSSPUG00000013424	PRDM12	82	92.440	Sphenodon_punctatus
ENSCAFG00000023076	PRDM12	96	66.867	ENSSPAG00000022420	-	74	77.860	Stegastes_partitus
ENSCAFG00000023076	PRDM12	99	75.516	ENSSPAG00000018824	prdm12b	79	82.000	Stegastes_partitus
ENSCAFG00000023076	PRDM12	99	99.065	ENSSSCG00000005703	PRDM12	88	99.065	Sus_scrofa
ENSCAFG00000023076	PRDM12	99	77.083	ENSTRUG00000018659	prdm12b	81	82.943	Takifugu_rubripes
ENSCAFG00000023076	PRDM12	96	78.275	ENSTRUG00000013239	-	77	86.131	Takifugu_rubripes
ENSCAFG00000023076	PRDM12	96	78.710	ENSTNIG00000005859	-	76	85.609	Tetraodon_nigroviridis
ENSCAFG00000023076	PRDM12	99	76.558	ENSTNIG00000009020	prdm12b	80	83.165	Tetraodon_nigroviridis
ENSCAFG00000023076	PRDM12	95	98.039	ENSUAMG00000009653	PRDM12	85	98.039	Ursus_americanus
ENSCAFG00000023076	PRDM12	90	98.962	ENSVVUG00000027662	PRDM12	69	98.962	Vulpes_vulpes
ENSCAFG00000023076	PRDM12	99	77.576	ENSXCOG00000002836	prdm12b	79	83.108	Xiphophorus_couchianus
ENSCAFG00000023076	PRDM12	99	76.877	ENSXMAG00000005537	prdm12b	80	82.274	Xiphophorus_maculatus
ENSCAFG00000023076	PRDM12	99	74.194	ENSXMAG00000028012	-	78	81.481	Xiphophorus_maculatus