EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCAFG00000023113 (Gene tree)
Gene ID: 611405
Gene Symbol: SRRM4
Alias: -
Full Name: serine/arginine repetitive matrix 4
Gene Type: protein_coding
Species: Canis_familiaris
Status: putative
Strand: Plus strand
Length: 147001 bases
Position: chr26:15171325-15318325
Accession: 46814
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00000039385	SRRM_C	PF15230.6	2.8e-25	1	1
ENSCAFP00000030575	SRRM_C	PF15230.6	2.8e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00000044060	-	2309	XM_849073	ENSCAFP00000039385	609 (aa)	XP_854166	J9P1G1
ENSCAFT00000035330	-	1833	-	ENSCAFP00000030575	610 (aa)	-	F1Q174

Gene Model

Click here to download ENSCAFG00000023113's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00000023113's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00000023113	SRRM4	86	92.337	ENSG00000139767	SRRM4	85	92.308	Homo_sapiens
ENSCAFG00000023113	SRRM4	79	96.066	ENSAMEG00000016072	SRRM4	89	96.091	Ailuropoda_melanoleuca
ENSCAFG00000023113	SRRM4	65	56.068	ENSAPLG00000009202	SRRM4	91	55.351	Anas_platyrhynchos
ENSCAFG00000023113	SRRM4	85	47.753	ENSACAG00000004139	SRRM4	88	49.907	Anolis_carolinensis
ENSCAFG00000023113	SRRM4	86	91.762	ENSBTAG00000008676	SRRM4	86	91.731	Bos_taurus
ENSCAFG00000023113	SRRM4	86	92.529	ENSCJAG00000009146	SRRM4	85	92.500	Callithrix_jacchus
ENSCAFG00000023113	SRRM4	85	83.270	ENSCAFG00020018665	SRRM4	55	100.000	Canis_lupus_dingo
ENSCAFG00000023113	SRRM4	86	72.727	ENSCHIG00000019151	SRRM4	57	92.381	Capra_hircus
ENSCAFG00000023113	SRRM4	78	90.605	ENSTSYG00000012239	SRRM4	84	90.566	Carlito_syrichta
ENSCAFG00000023113	SRRM4	76	89.677	ENSCAPG00000008729	SRRM4	88	89.700	Cavia_aperea
ENSCAFG00000023113	SRRM4	86	90.613	ENSCPOG00000003544	SRRM4	85	90.577	Cavia_porcellus
ENSCAFG00000023113	SRRM4	86	91.954	ENSCCAG00000022479	SRRM4	85	91.923	Cebus_capucinus
ENSCAFG00000023113	SRRM4	86	91.762	ENSCATG00000036343	SRRM4	85	91.731	Cercocebus_atys
ENSCAFG00000023113	SRRM4	86	91.939	ENSCLAG00000009764	SRRM4	85	91.923	Chinchilla_lanigera
ENSCAFG00000023113	SRRM4	86	91.954	ENSCSAG00000002300	SRRM4	85	91.923	Chlorocebus_sabaeus
ENSCAFG00000023113	SRRM4	86	61.765	ENSCPBG00000012293	SRRM4	87	63.838	Chrysemys_picta_bellii
ENSCAFG00000023113	SRRM4	86	87.931	ENSCANG00000031719	SRRM4	85	88.077	Colobus_angolensis_palliatus
ENSCAFG00000023113	SRRM4	85	82.308	ENSCGRG00001000544	Srrm4	86	82.692	Cricetulus_griseus_chok1gshd
ENSCAFG00000023113	SRRM4	86	77.778	ENSCGRG00000006973	Srrm4	85	75.192	Cricetulus_griseus_crigri
ENSCAFG00000023113	SRRM4	85	89.423	ENSDNOG00000000260	SRRM4	88	89.423	Dasypus_novemcinctus
ENSCAFG00000023113	SRRM4	86	80.115	ENSDORG00000015243	Srrm4	87	80.000	Dipodomys_ordii
ENSCAFG00000023113	SRRM4	85	93.810	ENSEASG00005008759	SRRM4	87	93.846	Equus_asinus_asinus
ENSCAFG00000023113	SRRM4	85	93.810	ENSECAG00000021729	SRRM4	87	93.846	Equus_caballus
ENSCAFG00000023113	SRRM4	100	94.880	ENSFCAG00000010536	SRRM4	100	94.880	Felis_catus
ENSCAFG00000023113	SRRM4	85	87.645	ENSFDAG00000007218	SRRM4	85	89.443	Fukomys_damarensis
ENSCAFG00000023113	SRRM4	59	57.412	ENSGAGG00000017218	SRRM4	82	61.630	Gopherus_agassizii
ENSCAFG00000023113	SRRM4	86	92.529	ENSGGOG00000005338	SRRM4	85	92.500	Gorilla_gorilla
ENSCAFG00000023113	SRRM4	85	91.137	ENSHGLG00000007830	SRRM4	86	91.171	Heterocephalus_glaber_female
ENSCAFG00000023113	SRRM4	78	83.019	ENSHGLG00100008549	SRRM4	95	81.511	Heterocephalus_glaber_male
ENSCAFG00000023113	SRRM4	78	79.498	ENSSTOG00000026642	SRRM4	83	76.939	Ictidomys_tridecemlineatus
ENSCAFG00000023113	SRRM4	83	81.423	ENSJJAG00000016448	Srrm4	81	87.265	Jaculus_jaculus
ENSCAFG00000023113	SRRM4	85	89.189	ENSLAFG00000003731	SRRM4	84	90.000	Loxodonta_africana
ENSCAFG00000023113	SRRM4	86	92.146	ENSMFAG00000041271	SRRM4	84	92.115	Macaca_fascicularis
ENSCAFG00000023113	SRRM4	84	79.151	ENSMMUG00000021230	SRRM4	61	87.664	Macaca_mulatta
ENSCAFG00000023113	SRRM4	86	91.954	ENSMNEG00000044154	SRRM4	84	91.923	Macaca_nemestrina
ENSCAFG00000023113	SRRM4	86	92.146	ENSMLEG00000034455	SRRM4	85	92.115	Mandrillus_leucophaeus
ENSCAFG00000023113	SRRM4	85	59.662	ENSMGAG00000009082	SRRM4	87	58.349	Meleagris_gallopavo
ENSCAFG00000023113	SRRM4	85	81.731	ENSMAUG00000013203	Srrm4	86	82.115	Mesocricetus_auratus
ENSCAFG00000023113	SRRM4	86	91.188	ENSMICG00000012386	SRRM4	85	91.154	Microcebus_murinus
ENSCAFG00000023113	SRRM4	85	81.923	ENSMOCG00000006737	Srrm4	86	82.308	Microtus_ochrogaster
ENSCAFG00000023113	SRRM4	85	85.385	MGP_CAROLIEiJ_G0027638	Srrm4	85	83.269	Mus_caroli
ENSCAFG00000023113	SRRM4	85	84.971	ENSMUSG00000063919	Srrm4	85	82.885	Mus_musculus
ENSCAFG00000023113	SRRM4	85	83.269	MGP_PahariEiJ_G0024219	Srrm4	85	81.154	Mus_pahari
ENSCAFG00000023113	SRRM4	85	85.000	MGP_SPRETEiJ_G0028637	Srrm4	85	82.885	Mus_spretus
ENSCAFG00000023113	SRRM4	100	95.731	ENSMPUG00000002930	SRRM4	100	95.731	Mustela_putorius_furo
ENSCAFG00000023113	SRRM4	86	89.293	ENSNGAG00000020807	Srrm4	86	89.251	Nannospalax_galili
ENSCAFG00000023113	SRRM4	86	92.146	ENSNLEG00000000200	SRRM4	85	92.115	Nomascus_leucogenys
ENSCAFG00000023113	SRRM4	50	76.344	ENSMEUG00000010419	-	53	77.193	Notamacropus_eugenii
ENSCAFG00000023113	SRRM4	85	81.905	ENSOPRG00000016981	SRRM4	77	81.250	Ochotona_princeps
ENSCAFG00000023113	SRRM4	85	90.962	ENSODEG00000006291	SRRM4	85	90.962	Octodon_degus
ENSCAFG00000023113	SRRM4	85	89.382	ENSOCUG00000004503	SRRM4	77	89.443	Oryctolagus_cuniculus
ENSCAFG00000023113	SRRM4	86	91.188	ENSOGAG00000015431	SRRM4	85	91.154	Otolemur_garnettii
ENSCAFG00000023113	SRRM4	86	91.762	ENSOARG00000002063	SRRM4	86	91.731	Ovis_aries
ENSCAFG00000023113	SRRM4	78	91.841	ENSPPAG00000028134	SRRM4	84	91.807	Pan_paniscus
ENSCAFG00000023113	SRRM4	100	95.800	ENSPPRG00000002659	SRRM4	100	95.800	Panthera_pardus
ENSCAFG00000023113	SRRM4	86	92.529	ENSPTRG00000005517	SRRM4	85	92.500	Pan_troglodytes
ENSCAFG00000023113	SRRM4	86	91.954	ENSPANG00000022544	SRRM4	99	91.765	Papio_anubis
ENSCAFG00000023113	SRRM4	85	82.342	ENSPEMG00000001823	Srrm4	86	86.180	Peromyscus_maniculatus_bairdii
ENSCAFG00000023113	SRRM4	78	79.289	ENSPCAG00000016401	SRRM4	68	80.672	Procavia_capensis
ENSCAFG00000023113	SRRM4	86	92.720	ENSPCOG00000013803	SRRM4	86	92.692	Propithecus_coquereli
ENSCAFG00000023113	SRRM4	78	93.933	ENSPVAG00000017487	SRRM4	85	93.908	Pteropus_vampyrus
ENSCAFG00000023113	SRRM4	85	84.615	ENSRNOG00000001141	Srrm4	86	82.500	Rattus_norvegicus
ENSCAFG00000023113	SRRM4	81	79.837	ENSRBIG00000040107	SRRM4	61	89.971	Rhinopithecus_bieti
ENSCAFG00000023113	SRRM4	81	80.448	ENSRROG00000035868	SRRM4	61	91.117	Rhinopithecus_roxellana
ENSCAFG00000023113	SRRM4	86	84.483	ENSSBOG00000035310	SRRM4	77	92.523	Saimiri_boliviensis_boliviensis
ENSCAFG00000023113	SRRM4	78	64.529	ENSSHAG00000017330	SRRM4	87	64.529	Sarcophilus_harrisii
ENSCAFG00000023113	SRRM4	52	84.543	ENSSARG00000012647	SRRM4	84	70.798	Sorex_araneus
ENSCAFG00000023113	SRRM4	86	92.146	ENSSSCG00000009845	SRRM4	85	92.115	Sus_scrofa
ENSCAFG00000023113	SRRM4	64	57.398	ENSTGUG00000009228	SRRM4	91	57.519	Taeniopygia_guttata
ENSCAFG00000023113	SRRM4	86	59.160	ENSVPAG00000007937	SRRM4	65	93.793	Vicugna_pacos
ENSCAFG00000023113	SRRM4	59	97.297	ENSVVUG00000013334	SRRM4	100	97.297	Vulpes_vulpes