EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAFG00000023359 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Canis_familiaris
Status: putative
Strand: Minus strand
Length: 774 bases
Position: chr7:59922826-59923599
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00000014841	Nucleoplasmin	PF03066.15	1e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00000016046	-	720	-	ENSCAFP00000014841	240 (aa)	-	E2RAD1

Gene Model

Click here to download ENSCAFG00000023359's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00000023359's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAFG00000023359	-	99	60.305	ENSCAFG00000016912	NPM1	88	60.837
ENSCAFG00000023359	-	99	56.202	ENSCAFG00000007173	-	88	58.935
ENSCAFG00000023359	-	99	51.550	ENSCAFG00000005880	-	86	51.527
ENSCAFG00000023359	-	99	41.016	ENSCAFG00000032713	-	93	42.188
ENSCAFG00000023359	-	55	63.576	ENSCAFG00000031513	-	100	63.576
ENSCAFG00000023359	-	99	51.538	ENSCAFG00000004550	-	87	51.923

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00000023359	-	65	39.053	ENSAPOG00000004268	npm1b	55	39.053	Acanthochromis_polyacanthus
ENSCAFG00000023359	-	99	36.293	ENSAOCG00000012549	npm1b	85	35.907	Amphiprion_ocellaris
ENSCAFG00000023359	-	97	46.063	ENSACAG00000015626	-	85	45.882	Anolis_carolinensis
ENSCAFG00000023359	-	63	39.286	ENSAMXG00000042148	npm1b	63	37.368	Astyanax_mexicanus
ENSCAFG00000023359	-	52	51.799	ENSCPBG00000027172	-	75	51.799	Chrysemys_picta_bellii
ENSCAFG00000023359	-	100	47.328	ENSCPBG00000021221	-	53	47.328	Chrysemys_picta_bellii
ENSCAFG00000023359	-	59	37.908	ENSCSEG00000004530	npm1b	83	34.524	Cynoglossus_semilaevis
ENSCAFG00000023359	-	68	34.659	ENSCVAG00000013016	npm1b	77	32.083	Cyprinodon_variegatus
ENSCAFG00000023359	-	70	41.935	ENSDARG00000037675	npm1b	84	34.902	Danio_rerio
ENSCAFG00000023359	-	93	45.902	ENSFALG00000003320	-	82	46.586	Ficedula_albicollis
ENSCAFG00000023359	-	62	34.969	ENSFHEG00000020794	npm1b	77	31.250	Fundulus_heteroclitus
ENSCAFG00000023359	-	70	37.037	ENSGMOG00000002689	npm1b	64	39.267	Gadus_morhua
ENSCAFG00000023359	-	99	47.104	ENSGALG00000002197	-	64	47.529	Gallus_gallus
ENSCAFG00000023359	-	63	33.929	ENSGAFG00000017709	npm1b	64	34.500	Gambusia_affinis
ENSCAFG00000023359	-	66	33.908	ENSGACG00000016706	npm1b	83	35.341	Gasterosteus_aculeatus
ENSCAFG00000023359	-	100	46.947	ENSGAGG00000020250	-	88	46.947	Gopherus_agassizii
ENSCAFG00000023359	-	67	40.571	ENSHBUG00000019903	npm1b	57	41.989	Haplochromis_burtoni
ENSCAFG00000023359	-	99	33.462	ENSHCOG00000003895	npm1b	85	34.733	Hippocampus_comes
ENSCAFG00000023359	-	58	38.961	ENSIPUG00000020165	npm1b	72	36.111	Ictalurus_punctatus
ENSCAFG00000023359	-	67	37.079	ENSKMAG00000008260	npm1b	64	37.000	Kryptolebias_marmoratus
ENSCAFG00000023359	-	95	31.868	ENSLACG00000001779	-	90	33.074	Latimeria_chalumnae
ENSCAFG00000023359	-	91	46.025	ENSMGAG00000001591	-	86	46.502	Meleagris_gallopavo
ENSCAFG00000023359	-	59	40.373	ENSPKIG00000020050	npm1b	84	35.094	Paramormyrops_kingsleyae
ENSCAFG00000023359	-	98	46.875	ENSPSIG00000011204	-	81	46.538	Pelodiscus_sinensis
ENSCAFG00000023359	-	91	30.380	ENSPMAG00000004930	npm1b	85	32.143	Petromyzon_marinus
ENSCAFG00000023359	-	58	36.601	ENSPFOG00000018357	npm1b	54	35.976	Poecilia_formosa
ENSCAFG00000023359	-	95	34.274	ENSPNAG00000005498	npm1b	84	32.016	Pygocentrus_nattereri
ENSCAFG00000023359	-	95	35.156	ENSSFOG00015005064	npm1b	84	35.547	Scleropages_formosus
ENSCAFG00000023359	-	90	31.556	ENSSMAG00000008088	npm1b	77	33.333	Scophthalmus_maximus
ENSCAFG00000023359	-	65	40.237	ENSSDUG00000007726	npm1b	55	40.237	Seriola_dumerili
ENSCAFG00000023359	-	65	40.237	ENSSLDG00000021396	npm1b	55	40.237	Seriola_lalandi_dorsalis
ENSCAFG00000023359	-	56	51.316	ENSSPUG00000017271	-	77	51.316	Sphenodon_punctatus
ENSCAFG00000023359	-	56	44.218	ENSSPUG00000015604	-	75	44.218	Sphenodon_punctatus
ENSCAFG00000023359	-	99	34.749	ENSSPAG00000011152	npm1b	86	36.398	Stegastes_partitus
ENSCAFG00000023359	-	92	44.672	ENSTGUG00000014970	-	87	45.161	Taeniopygia_guttata
ENSCAFG00000023359	-	100	35.897	ENSXETG00000008403	npm1	87	40.809	Xenopus_tropicalis
ENSCAFG00000023359	-	67	36.782	ENSXMAG00000001986	npm1b	70	34.091	Xiphophorus_maculatus