EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

Orthologs

Description

Ensembl ID: ENSCAFG00000023501 (Gene tree)
Gene ID: 483186
Gene Symbol: SETDB1
Alias: -
Full Name: SET domain bifurcated 1
Gene Type: protein_coding
Species: Canis_familiaris
Status: putative
Strand: Plus strand
Length: 33362 bases
Position: chr17:60035798-60069159
Accession: 46060
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00000037492	MBD	PF01429.19	1e-12	1	1
ENSCAFP00000041684	MBD	PF01429.19	1.2e-12	1	1
ENSCAFP00000031500	MBD	PF01429.19	1.3e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00000036155	-	3891	-	ENSCAFP00000031500	1296 (aa)	-	E2QW40
ENSCAFT00000049297	-	4200	XM_005630769	ENSCAFP00000041684	1293 (aa)	XP_005630828	J9P7P5
ENSCAFT00000045593	-	3333	-	ENSCAFP00000037492	1111 (aa)	-	J9NWE7

Gene Model

Click here to download ENSCAFG00000023501's gene model file

Pathways

Pathway ID	Pathway Name	Source
cfa00310	Lysine degradation	KEGG
cfa04550	Signaling pathways regulating pluripotency of stem cells	KEGG

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00000023501	SETDB1	100	96.448	ENSG00000143379	SETDB1	100	98.160	Homo_sapiens
ENSCAFG00000023501	SETDB1	89	61.187	ENSAPOG00000016228	setdb1b	99	68.817	Acanthochromis_polyacanthus
ENSCAFG00000023501	SETDB1	100	97.920	ENSAMEG00000001160	SETDB1	100	97.920	Ailuropoda_melanoleuca
ENSCAFG00000023501	SETDB1	92	70.652	ENSACIG00000007359	setdb1b	99	70.652	Amphilophus_citrinellus
ENSCAFG00000023501	SETDB1	89	67.526	ENSAOCG00000005586	setdb1b	98	67.526	Amphiprion_ocellaris
ENSCAFG00000023501	SETDB1	89	67.526	ENSAPEG00000007774	setdb1b	99	67.526	Amphiprion_percula
ENSCAFG00000023501	SETDB1	92	63.014	ENSATEG00000023520	setdb1b	99	69.355	Anabas_testudineus
ENSCAFG00000023501	SETDB1	99	77.768	ENSAPLG00000013908	SETDB1	100	76.220	Anas_platyrhynchos
ENSCAFG00000023501	SETDB1	100	96.528	ENSANAG00000001819	SETDB1	100	96.528	Aotus_nancymaae
ENSCAFG00000023501	SETDB1	88	70.270	ENSACLG00000020489	setdb1b	98	70.811	Astatotilapia_calliptera
ENSCAFG00000023501	SETDB1	83	67.500	ENSAMXG00000016168	setdb1b	80	74.286	Astyanax_mexicanus
ENSCAFG00000023501	SETDB1	74	59.748	ENSAMXG00000010030	setdb1a	59	66.165	Astyanax_mexicanus
ENSCAFG00000023501	SETDB1	100	96.059	ENSBTAG00000000098	SETDB1	100	96.059	Bos_taurus
ENSCAFG00000023501	SETDB1	100	95.150	ENSCJAG00000006972	SETDB1	100	95.150	Callithrix_jacchus
ENSCAFG00000023501	SETDB1	100	99.923	ENSCAFG00020013596	SETDB1	100	99.923	Canis_lupus_dingo
ENSCAFG00000023501	SETDB1	100	95.904	ENSCHIG00000010698	SETDB1	100	95.904	Capra_hircus
ENSCAFG00000023501	SETDB1	81	94.450	ENSTSYG00000012646	SETDB1	100	94.258	Carlito_syrichta
ENSCAFG00000023501	SETDB1	88	94.521	ENSCAPG00000013619	SETDB1	100	79.504	Cavia_aperea
ENSCAFG00000023501	SETDB1	100	94.136	ENSCPOG00000001632	SETDB1	100	94.136	Cavia_porcellus
ENSCAFG00000023501	SETDB1	100	96.379	ENSCCAG00000024882	SETDB1	100	96.379	Cebus_capucinus
ENSCAFG00000023501	SETDB1	100	92.907	ENSCATG00000044888	SETDB1	100	92.907	Cercocebus_atys
ENSCAFG00000023501	SETDB1	100	93.995	ENSCLAG00000000242	SETDB1	100	94.303	Chinchilla_lanigera
ENSCAFG00000023501	SETDB1	100	94.614	ENSCSAG00000018034	SETDB1	100	96.238	Chlorocebus_sabaeus
ENSCAFG00000023501	SETDB1	100	86.543	ENSCHOG00000004013	SETDB1	100	86.234	Choloepus_hoffmanni
ENSCAFG00000023501	SETDB1	99	81.222	ENSCPBG00000008716	SETDB1	100	78.839	Chrysemys_picta_bellii
ENSCAFG00000023501	SETDB1	85	99.495	ENSCANG00000036388	SETDB1	98	95.000	Colobus_angolensis_palliatus
ENSCAFG00000023501	SETDB1	100	92.272	ENSCGRG00001010822	Setdb1	100	91.654	Cricetulus_griseus_chok1gshd
ENSCAFG00000023501	SETDB1	100	91.963	ENSCGRG00000005953	Setdb1	100	91.345	Cricetulus_griseus_crigri
ENSCAFG00000023501	SETDB1	90	63.902	ENSCSEG00000002988	setdb1b	98	69.730	Cynoglossus_semilaevis
ENSCAFG00000023501	SETDB1	90	69.634	ENSCVAG00000008877	setdb1b	99	69.634	Cyprinodon_variegatus
ENSCAFG00000023501	SETDB1	91	62.307	ENSDARG00000099021	setdb1b	99	56.109	Danio_rerio
ENSCAFG00000023501	SETDB1	100	96.533	ENSDNOG00000007754	SETDB1	100	96.533	Dasypus_novemcinctus
ENSCAFG00000023501	SETDB1	100	92.201	ENSDORG00000006830	Setdb1	100	92.278	Dipodomys_ordii
ENSCAFG00000023501	SETDB1	82	47.556	ENSEBUG00000005735	setdb1b	95	47.166	Eptatretus_burgeri
ENSCAFG00000023501	SETDB1	100	96.313	ENSEASG00005002061	SETDB1	100	96.313	Equus_asinus_asinus
ENSCAFG00000023501	SETDB1	100	96.544	ENSECAG00000023954	SETDB1	100	96.544	Equus_caballus
ENSCAFG00000023501	SETDB1	83	97.479	ENSEEUG00000015825	SETDB1	83	97.479	Erinaceus_europaeus
ENSCAFG00000023501	SETDB1	88	76.331	ENSELUG00000013948	setdb1b	98	76.331	Esox_lucius
ENSCAFG00000023501	SETDB1	63	69.149	ENSELUG00000006204	-	71	69.149	Esox_lucius
ENSCAFG00000023501	SETDB1	100	96.133	ENSFCAG00000009655	SETDB1	100	96.133	Felis_catus
ENSCAFG00000023501	SETDB1	100	94.217	ENSFDAG00000021515	SETDB1	100	93.832	Fukomys_damarensis
ENSCAFG00000023501	SETDB1	90	68.586	ENSFHEG00000022195	setdb1b	99	69.634	Fundulus_heteroclitus
ENSCAFG00000023501	SETDB1	87	78.235	ENSGMOG00000005993	setdb1b	93	78.235	Gadus_morhua
ENSCAFG00000023501	SETDB1	99	77.848	ENSGALG00000024051	SETDB1	92	73.652	Gallus_gallus
ENSCAFG00000023501	SETDB1	84	62.545	ENSGAFG00000012805	setdb1b	98	62.000	Gambusia_affinis
ENSCAFG00000023501	SETDB1	87	73.256	ENSGACG00000011675	setdb1b	93	74.419	Gasterosteus_aculeatus
ENSCAFG00000023501	SETDB1	99	81.312	ENSGAGG00000005348	SETDB1	100	78.992	Gopherus_agassizii
ENSCAFG00000023501	SETDB1	100	96.373	ENSGGOG00000016308	SETDB1	100	96.373	Gorilla_gorilla
ENSCAFG00000023501	SETDB1	88	70.270	ENSHBUG00000004618	setdb1b	98	70.811	Haplochromis_burtoni
ENSCAFG00000023501	SETDB1	100	94.136	ENSHGLG00000011098	SETDB1	100	94.136	Heterocephalus_glaber_female
ENSCAFG00000023501	SETDB1	100	93.514	ENSHGLG00100009789	SETDB1	100	93.514	Heterocephalus_glaber_male
ENSCAFG00000023501	SETDB1	91	63.443	ENSHCOG00000014567	setdb1b	98	68.649	Hippocampus_comes
ENSCAFG00000023501	SETDB1	87	72.989	ENSIPUG00000004536	setdb1	98	72.989	Ictalurus_punctatus
ENSCAFG00000023501	SETDB1	100	93.774	ENSSTOG00000006770	SETDB1	100	94.002	Ictidomys_tridecemlineatus
ENSCAFG00000023501	SETDB1	89	67.895	ENSKMAG00000001197	setdb1b	99	68.421	Kryptolebias_marmoratus
ENSCAFG00000023501	SETDB1	93	67.568	ENSLBEG00000025862	setdb1b	96	68.108	Labrus_bergylta
ENSCAFG00000023501	SETDB1	99	70.502	ENSLACG00000011159	SETDB1	100	68.901	Latimeria_chalumnae
ENSCAFG00000023501	SETDB1	100	93.440	ENSLAFG00000004006	SETDB1	100	93.440	Loxodonta_africana
ENSCAFG00000023501	SETDB1	100	96.680	ENSMFAG00000042328	SETDB1	100	96.680	Macaca_fascicularis
ENSCAFG00000023501	SETDB1	100	96.451	ENSMMUG00000023235	SETDB1	100	96.451	Macaca_mulatta
ENSCAFG00000023501	SETDB1	100	96.602	ENSMNEG00000017223	SETDB1	100	96.602	Macaca_nemestrina
ENSCAFG00000023501	SETDB1	100	96.680	ENSMLEG00000033050	SETDB1	100	96.680	Mandrillus_leucophaeus
ENSCAFG00000023501	SETDB1	88	69.444	ENSMAMG00000015176	setdb1b	85	70.000	Mastacembelus_armatus
ENSCAFG00000023501	SETDB1	88	70.270	ENSMZEG00005016099	setdb1b	98	70.811	Maylandia_zebra
ENSCAFG00000023501	SETDB1	85	75.195	ENSMGAG00000001018	SETDB1	97	70.759	Meleagris_gallopavo
ENSCAFG00000023501	SETDB1	95	91.532	ENSMAUG00000021391	Setdb1	100	92.391	Mesocricetus_auratus
ENSCAFG00000023501	SETDB1	100	95.605	ENSMICG00000000425	SETDB1	100	94.834	Microcebus_murinus
ENSCAFG00000023501	SETDB1	100	91.846	ENSMOCG00000017407	Setdb1	100	91.846	Microtus_ochrogaster
ENSCAFG00000023501	SETDB1	89	65.196	ENSMMOG00000016162	setdb1b	99	69.730	Mola_mola
ENSCAFG00000023501	SETDB1	99	87.714	ENSMODG00000018821	SETDB1	90	87.393	Monodelphis_domestica
ENSCAFG00000023501	SETDB1	63	67.989	ENSMALG00000007801	setdb1b	95	62.528	Monopterus_albus
ENSCAFG00000023501	SETDB1	100	90.992	MGP_CAROLIEiJ_G0025342	Setdb1	100	90.763	Mus_caroli
ENSCAFG00000023501	SETDB1	100	90.251	ENSMUSG00000015697	Setdb1	100	90.175	Mus_musculus
ENSCAFG00000023501	SETDB1	100	93.119	ENSMPUG00000004298	SETDB1	100	93.119	Mustela_putorius_furo
ENSCAFG00000023501	SETDB1	100	92.045	ENSMLUG00000010486	SETDB1	100	91.970	Myotis_lucifugus
ENSCAFG00000023501	SETDB1	100	91.879	ENSNGAG00000020151	Setdb1	100	91.029	Nannospalax_galili
ENSCAFG00000023501	SETDB1	88	70.811	ENSNBRG00000003147	setdb1b	99	71.351	Neolamprologus_brichardi
ENSCAFG00000023501	SETDB1	100	92.155	ENSNLEG00000009996	SETDB1	100	92.155	Nomascus_leucogenys
ENSCAFG00000023501	SETDB1	88	88.391	ENSMEUG00000006544	-	87	89.069	Notamacropus_eugenii
ENSCAFG00000023501	SETDB1	100	80.880	ENSMEUG00000000555	-	100	79.491	Notamacropus_eugenii
ENSCAFG00000023501	SETDB1	97	91.806	ENSOPRG00000015349	SETDB1	100	91.726	Ochotona_princeps
ENSCAFG00000023501	SETDB1	100	94.440	ENSODEG00000012471	SETDB1	100	94.440	Octodon_degus
ENSCAFG00000023501	SETDB1	88	70.270	ENSONIG00000006454	setdb1b	98	70.811	Oreochromis_niloticus
ENSCAFG00000023501	SETDB1	100	93.841	ENSOCUG00000003642	SETDB1	100	94.072	Oryctolagus_cuniculus
ENSCAFG00000023501	SETDB1	91	65.842	ENSORLG00000010602	setdb1b	98	68.041	Oryzias_latipes
ENSCAFG00000023501	SETDB1	59	81.402	ENSORLG00020008638	setdb1b	97	60.706	Oryzias_latipes_hni
ENSCAFG00000023501	SETDB1	91	64.251	ENSORLG00015014543	setdb1b	98	66.332	Oryzias_latipes_hsok
ENSCAFG00000023501	SETDB1	90	66.169	ENSOMEG00000009457	setdb1b	98	69.271	Oryzias_melastigma
ENSCAFG00000023501	SETDB1	100	92.093	ENSOGAG00000010320	SETDB1	100	89.069	Otolemur_garnettii
ENSCAFG00000023501	SETDB1	100	95.689	ENSOARG00000020880	SETDB1	100	95.689	Ovis_aries
ENSCAFG00000023501	SETDB1	100	96.293	ENSPPAG00000041015	SETDB1	100	96.142	Pan_paniscus
ENSCAFG00000023501	SETDB1	100	97.757	ENSPPRG00000005462	SETDB1	100	97.757	Panthera_pardus
ENSCAFG00000023501	SETDB1	100	97.061	ENSPTIG00000014233	SETDB1	100	97.061	Panthera_tigris_altaica
ENSCAFG00000023501	SETDB1	100	96.216	ENSPTRG00000001267	SETDB1	100	96.065	Pan_troglodytes
ENSCAFG00000023501	SETDB1	100	93.981	ENSPANG00000020214	SETDB1	100	93.981	Papio_anubis
ENSCAFG00000023501	SETDB1	99	57.827	ENSPKIG00000010963	setdb1b	97	72.826	Paramormyrops_kingsleyae
ENSCAFG00000023501	SETDB1	66	79.973	ENSPSIG00000008407	SETDB1	85	79.838	Pelodiscus_sinensis
ENSCAFG00000023501	SETDB1	100	91.637	ENSPEMG00000010553	Setdb1	100	92.219	Peromyscus_maniculatus_bairdii
ENSCAFG00000023501	SETDB1	99	55.961	ENSPMAG00000001573	setdb1b	100	50.850	Petromyzon_marinus
ENSCAFG00000023501	SETDB1	99	57.167	ENSPFOG00000004429	setdb1b	97	70.811	Poecilia_formosa
ENSCAFG00000023501	SETDB1	99	59.582	ENSPFOG00000004623	-	99	56.213	Poecilia_formosa
ENSCAFG00000023501	SETDB1	86	62.000	ENSPLAG00000017117	setdb1b	98	63.333	Poecilia_latipinna
ENSCAFG00000023501	SETDB1	89	68.617	ENSPLAG00000019076	-	99	69.681	Poecilia_latipinna
ENSCAFG00000023501	SETDB1	89	68.617	ENSPMEG00000006468	setdb1b	98	69.681	Poecilia_mexicana
ENSCAFG00000023501	SETDB1	89	68.617	ENSPREG00000017459	setdb1b	98	69.149	Poecilia_reticulata
ENSCAFG00000023501	SETDB1	100	96.371	ENSPPYG00000000887	SETDB1	100	96.371	Pongo_abelii
ENSCAFG00000023501	SETDB1	85	93.116	ENSPCAG00000002527	SETDB1	100	93.116	Procavia_capensis
ENSCAFG00000023501	SETDB1	100	96.062	ENSPCOG00000027869	SETDB1	100	95.985	Propithecus_coquereli
ENSCAFG00000023501	SETDB1	94	93.666	ENSPVAG00000004355	SETDB1	93	93.822	Pteropus_vampyrus
ENSCAFG00000023501	SETDB1	89	70.811	ENSPNYG00000003997	setdb1b	90	70.811	Pundamilia_nyererei
ENSCAFG00000023501	SETDB1	89	64.953	ENSPNAG00000021617	setdb1b	52	71.196	Pygocentrus_nattereri
ENSCAFG00000023501	SETDB1	100	90.367	ENSRNOG00000021143	Setdb1	100	90.138	Rattus_norvegicus
ENSCAFG00000023501	SETDB1	100	96.680	ENSRBIG00000042359	SETDB1	100	96.680	Rhinopithecus_bieti
ENSCAFG00000023501	SETDB1	100	96.528	ENSRROG00000032628	SETDB1	100	96.528	Rhinopithecus_roxellana
ENSCAFG00000023501	SETDB1	100	96.083	ENSSBOG00000028608	SETDB1	100	96.083	Saimiri_boliviensis_boliviensis
ENSCAFG00000023501	SETDB1	100	86.862	ENSSHAG00000012701	SETDB1	100	86.476	Sarcophilus_harrisii
ENSCAFG00000023501	SETDB1	87	69.849	ENSSFOG00015022183	setdb1	96	76.571	Scleropages_formosus
ENSCAFG00000023501	SETDB1	70	60.352	ENSSMAG00000015398	setdb1b	99	66.667	Scophthalmus_maximus
ENSCAFG00000023501	SETDB1	93	63.636	ENSSDUG00000007513	setdb1b	99	69.792	Seriola_dumerili
ENSCAFG00000023501	SETDB1	90	63.636	ENSSLDG00000015209	setdb1b	99	70.103	Seriola_lalandi_dorsalis
ENSCAFG00000023501	SETDB1	99	78.300	ENSSPUG00000002969	SETDB1	100	75.910	Sphenodon_punctatus
ENSCAFG00000023501	SETDB1	100	94.977	ENSSSCG00000006645	SETDB1	100	94.900	Sus_scrofa
ENSCAFG00000023501	SETDB1	99	74.466	ENSTGUG00000004684	SETDB1	100	73.517	Taeniopygia_guttata
ENSCAFG00000023501	SETDB1	92	67.380	ENSTRUG00000014641	setdb1b	97	67.380	Takifugu_rubripes
ENSCAFG00000023501	SETDB1	99	57.204	ENSTNIG00000008065	setdb1b	94	68.478	Tetraodon_nigroviridis
ENSCAFG00000023501	SETDB1	100	94.624	ENSTBEG00000009306	SETDB1	100	95.847	Tupaia_belangeri
ENSCAFG00000023501	SETDB1	90	93.506	ENSTTRG00000006966	SETDB1	89	94.106	Tursiops_truncatus
ENSCAFG00000023501	SETDB1	100	97.614	ENSUAMG00000026724	SETDB1	100	97.614	Ursus_americanus
ENSCAFG00000023501	SETDB1	100	93.623	ENSUMAG00000003141	SETDB1	100	93.623	Ursus_maritimus
ENSCAFG00000023501	SETDB1	74	97.611	ENSVPAG00000005440	SETDB1	78	97.611	Vicugna_pacos
ENSCAFG00000023501	SETDB1	100	99.614	ENSVVUG00000011637	SETDB1	100	99.614	Vulpes_vulpes
ENSCAFG00000023501	SETDB1	99	71.958	ENSXETG00000008936	setdb1	99	69.741	Xenopus_tropicalis
ENSCAFG00000023501	SETDB1	99	58.698	ENSXCOG00000019497	setdb1b	87	73.446	Xiphophorus_couchianus
ENSCAFG00000023501	SETDB1	90	68.617	ENSXMAG00000016600	setdb1b	99	69.149	Xiphophorus_maculatus