EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAFG00000024478 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Canis_familiaris
Status: putative
Strand: Minus strand
Length: 1440 bases
Position: chr22:14028632-14030071
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00000042977	GTP_EFTU	PF00009.27	2.2e-38	1	1
ENSCAFP00000039364	GTP_EFTU_D3	PF03143.17	1.9e-20	1	1
ENSCAFP00000042977	GTP_EFTU_D3	PF03143.17	1.2e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00000047261	-	549	-	ENSCAFP00000039364	183 (aa)	-	J9P1E0
ENSCAFT00000009982	-	1302	-	ENSCAFP00000042977	433 (aa)	-	J9PAZ9

Gene Model

Click here to download ENSCAFG00000024478's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00000024478's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAFG00000024478	-	95	54.023	ENSCAFG00000002934	-	97	52.364
ENSCAFG00000024478	-	97	73.118	ENSCAFG00000009915	-	98	67.478
ENSCAFG00000024478	-	78	61.318	ENSCAFG00000009697	-	99	61.318
ENSCAFG00000024478	-	100	71.965	ENSCAFG00000004640	-	98	71.965
ENSCAFG00000024478	-	99	68.254	ENSCAFG00000014227	-	95	67.416
ENSCAFG00000024478	-	99	70.370	ENSCAFG00000008814	-	98	67.615
ENSCAFG00000024478	-	100	73.846	ENSCAFG00000028808	-	98	73.846
ENSCAFG00000024478	-	71	31.646	ENSCAFG00000017216	TUFM	63	31.646
ENSCAFG00000024478	-	99	74.074	ENSCAFG00000023039	-	98	72.687
ENSCAFG00000024478	-	100	75.824	ENSCAFG00000029427	-	98	75.824
ENSCAFG00000024478	-	97	31.828	ENSCAFG00000018856	GSPT1	82	31.828
ENSCAFG00000024478	-	99	71.277	ENSCAFG00000006937	-	96	67.184
ENSCAFG00000024478	-	100	75.824	ENSCAFG00000018586	-	98	75.824
ENSCAFG00000024478	-	100	65.714	ENSCAFG00000013249	-	99	65.714
ENSCAFG00000024478	-	99	70.067	ENSCAFG00000003316	-	98	70.067
ENSCAFG00000024478	-	100	75.824	ENSCAFG00000009708	-	98	75.824
ENSCAFG00000024478	-	100	74.286	ENSCAFG00000011673	-	99	74.286
ENSCAFG00000024478	-	99	74.074	ENSCAFG00000007079	-	98	65.090
ENSCAFG00000024478	-	99	71.429	ENSCAFG00000024806	-	98	68.958
ENSCAFG00000024478	-	99	70.370	ENSCAFG00000019863	-	98	54.139
ENSCAFG00000024478	-	99	73.545	ENSCAFG00000023540	-	98	71.333
ENSCAFG00000024478	-	99	70.745	ENSCAFG00000008655	-	95	65.541
ENSCAFG00000024478	-	99	76.190	ENSCAFG00000009226	-	98	76.277
ENSCAFG00000024478	-	99	67.111	ENSCAFG00000007877	-	98	67.111
ENSCAFG00000024478	-	99	71.958	ENSCAFG00000017848	-	98	67.401
ENSCAFG00000024478	-	100	54.102	ENSCAFG00000032203	-	98	54.102
ENSCAFG00000024478	-	99	72.487	ENSCAFG00000018228	-	98	68.151
ENSCAFG00000024478	-	99	69.681	ENSCAFG00000031493	-	98	60.948
ENSCAFG00000024478	-	99	72.632	ENSCAFG00000029731	-	98	63.431
ENSCAFG00000024478	-	100	74.725	ENSCAFG00000014497	-	98	74.725
ENSCAFG00000024478	-	99	71.958	ENSCAFG00000008063	-	98	69.401
ENSCAFG00000024478	-	99	72.632	ENSCAFG00000002606	-	98	61.712
ENSCAFG00000024478	-	99	73.016	ENSCAFG00000009957	-	98	68.667
ENSCAFG00000024478	-	100	73.187	ENSCAFG00000031488	-	98	73.187
ENSCAFG00000024478	-	98	70.745	ENSCAFG00000007285	-	99	71.144
ENSCAFG00000024478	-	100	75.824	ENSCAFG00000002656	EEF1A1	98	75.824
ENSCAFG00000024478	-	100	73.187	ENSCAFG00000024406	-	98	73.187
ENSCAFG00000024478	-	96	31.579	ENSCAFG00000000226	HBS1L	62	31.579
ENSCAFG00000024478	-	100	70.288	ENSCAFG00000015899	-	98	70.288
ENSCAFG00000024478	-	99	71.728	ENSCAFG00000007984	-	98	69.518
ENSCAFG00000024478	-	100	65.563	ENSCAFG00000017032	-	98	65.563
ENSCAFG00000024478	-	74	67.372	ENSCAFG00000003424	-	100	67.372
ENSCAFG00000024478	-	99	69.312	ENSCAFG00000009769	-	98	66.960
ENSCAFG00000024478	-	100	74.725	ENSCAFG00000003668	-	98	74.725
ENSCAFG00000024478	-	99	76.190	ENSCAFG00000024474	-	98	74.945
ENSCAFG00000024478	-	100	71.491	ENSCAFG00000009973	-	98	71.491
ENSCAFG00000024478	-	100	75.824	ENSCAFG00000014627	-	98	75.824
ENSCAFG00000024478	-	100	75.165	ENSCAFG00000012222	-	98	75.165

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00000024478	-	99	49.111	ENSAMEG00000007333	-	98	49.446	Ailuropoda_melanoleuca
ENSCAFG00000024478	-	98	67.021	ENSAMEG00000003518	-	97	66.667	Ailuropoda_melanoleuca
ENSCAFG00000024478	-	99	50.794	ENSAMEG00000009199	-	97	43.694	Ailuropoda_melanoleuca
ENSCAFG00000024478	-	99	53.191	ENSAMEG00000003526	-	99	53.191	Ailuropoda_melanoleuca
ENSCAFG00000024478	-	92	58.621	ENSDNOG00000036688	-	98	50.000	Dasypus_novemcinctus
ENSCAFG00000024478	-	96	59.397	ENSDNOG00000043951	-	95	59.397	Dasypus_novemcinctus
ENSCAFG00000024478	-	99	58.730	ENSDNOG00000046924	-	91	57.812	Dasypus_novemcinctus
ENSCAFG00000024478	-	80	58.824	ENSDNOG00000036941	-	97	46.633	Dasypus_novemcinctus
ENSCAFG00000024478	-	99	48.786	ENSDNOG00000040076	-	98	48.786	Dasypus_novemcinctus
ENSCAFG00000024478	-	99	57.672	ENSMPUG00000000302	-	98	59.722	Mustela_putorius_furo
ENSCAFG00000024478	-	95	48.471	ENSMPUG00000010722	-	97	48.471	Mustela_putorius_furo
ENSCAFG00000024478	-	99	56.614	ENSMPUG00000011817	-	95	54.062	Mustela_putorius_furo
ENSCAFG00000024478	-	100	51.860	ENSMPUG00000006981	-	98	51.860	Mustela_putorius_furo
ENSCAFG00000024478	-	92	58.857	ENSMLUG00000023141	-	96	52.381	Myotis_lucifugus
ENSCAFG00000024478	-	97	51.630	ENSOCUG00000026580	-	98	46.814	Oryctolagus_cuniculus
ENSCAFG00000024478	-	100	44.469	ENSOCUG00000007020	-	98	44.469	Oryctolagus_cuniculus
ENSCAFG00000024478	-	99	48.222	ENSOARG00000009283	-	98	48.222	Ovis_aries
ENSCAFG00000024478	-	98	54.787	ENSSHAG00000015279	-	99	47.244	Sarcophilus_harrisii