EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAFG00000024858 (Gene tree)
Gene ID: 482796
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Canis_familiaris
Status: putative
Strand: Minus strand
Length: 5151 bases
Position: chr16:14846997-14852147
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00000034143	MMR_HSR1	PF01926.23	2.3e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00000038426	-	924	-	ENSCAFP00000034143	308 (aa)	-	F1PVT5

Gene Model

Click here to download ENSCAFG00000024858's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00000024858's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAFG00000024858	-	61	42.484	ENSCAFG00000004572	GIMAP8	74	43.750
ENSCAFG00000024858	-	52	42.138	ENSCAFG00000004576	GIMAP7	53	42.138
ENSCAFG00000024858	-	56	40.113	ENSCAFG00000004579	GIMAP4	53	40.113
ENSCAFG00000024858	-	53	50.920	ENSCAFG00000024817	-	52	49.153

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00000024858	-	71	60.360	ENSG00000133561	GIMAP6	72	60.190	Homo_sapiens
ENSCAFG00000024858	-	89	73.455	ENSAMEG00000009802	-	79	73.455	Ailuropoda_melanoleuca
ENSCAFG00000024858	-	71	56.710	ENSANAG00000036674	GIMAP6	72	56.621	Aotus_nancymaae
ENSCAFG00000024858	-	88	54.945	ENSBTAG00000050052	-	80	54.945	Bos_taurus
ENSCAFG00000024858	-	89	93.796	ENSCAFG00020006496	-	75	93.796	Canis_lupus_dingo
ENSCAFG00000024858	-	69	57.547	ENSCHIG00000026449	-	67	60.104	Capra_hircus
ENSCAFG00000024858	-	82	59.289	ENSCHIG00000019058	-	77	59.289	Capra_hircus
ENSCAFG00000024858	-	88	56.458	ENSCHIG00000012346	-	79	56.458	Capra_hircus
ENSCAFG00000024858	-	71	59.276	ENSTSYG00000031555	GIMAP6	72	59.524	Carlito_syrichta
ENSCAFG00000024858	-	82	51.190	ENSCPOG00000040378	-	82	50.397	Cavia_porcellus
ENSCAFG00000024858	-	64	65.152	ENSCCAG00000034011	GIMAP6	63	65.591	Cebus_capucinus
ENSCAFG00000024858	-	64	64.646	ENSCATG00000038067	GIMAP6	58	66.310	Cercocebus_atys
ENSCAFG00000024858	-	82	54.545	ENSCLAG00000001242	-	86	54.545	Chinchilla_lanigera
ENSCAFG00000024858	-	64	64.646	ENSCSAG00000006876	GIMAP6	59	60.664	Chlorocebus_sabaeus
ENSCAFG00000024858	-	66	57.619	ENSCANG00000029314	GIMAP6	58	58.571	Colobus_angolensis_palliatus
ENSCAFG00000024858	-	96	47.475	ENSCGRG00001023782	Gimap6	96	47.475	Cricetulus_griseus_chok1gshd
ENSCAFG00000024858	-	96	47.475	ENSCGRG00000014388	Gimap6	96	47.475	Cricetulus_griseus_crigri
ENSCAFG00000024858	-	55	48.214	ENSDORG00000023560	-	99	42.262	Dipodomys_ordii
ENSCAFG00000024858	-	61	66.667	ENSEASG00005007023	GIMAP6	71	66.667	Equus_asinus_asinus
ENSCAFG00000024858	-	89	62.545	ENSECAG00000003981	GIMAP6	79	62.545	Equus_caballus
ENSCAFG00000024858	-	69	64.220	ENSFCAG00000041878	GIMAP6	70	67.150	Felis_catus
ENSCAFG00000024858	-	56	62.209	ENSFDAG00000013097	-	63	62.209	Fukomys_damarensis
ENSCAFG00000024858	-	71	59.910	ENSGGOG00000000613	-	72	60.190	Gorilla_gorilla
ENSCAFG00000024858	-	82	54.941	ENSHGLG00000012994	GIMAP6	72	55.556	Heterocephalus_glaber_female
ENSCAFG00000024858	-	82	54.941	ENSHGLG00100004910	GIMAP6	72	55.556	Heterocephalus_glaber_male
ENSCAFG00000024858	-	71	59.910	ENSMFAG00000043478	GIMAP6	72	61.137	Macaca_fascicularis
ENSCAFG00000024858	-	71	59.910	ENSMMUG00000047276	GIMAP6	72	61.429	Macaca_mulatta
ENSCAFG00000024858	-	71	60.633	ENSMNEG00000029719	GIMAP6	72	60.664	Macaca_nemestrina
ENSCAFG00000024858	-	58	63.441	ENSMLEG00000029734	GIMAP6	58	58.571	Mandrillus_leucophaeus
ENSCAFG00000024858	-	95	46.758	ENSMAUG00000011214	Gimap6	95	46.758	Mesocricetus_auratus
ENSCAFG00000024858	-	64	55.981	ENSMICG00000033278	-	62	60.000	Microcebus_murinus
ENSCAFG00000024858	-	82	50.198	ENSMOCG00000018308	Gimap6	81	49.603	Microtus_ochrogaster
ENSCAFG00000024858	-	59	49.457	ENSMODG00000029183	-	52	49.457	Monodelphis_domestica
ENSCAFG00000024858	-	97	45.819	MGP_CAROLIEiJ_G0028350	Gimap6	97	45.819	Mus_caroli
ENSCAFG00000024858	-	97	45.485	ENSMUSG00000047867	Gimap6	97	45.485	Mus_musculus
ENSCAFG00000024858	-	97	45.151	MGP_SPRETEiJ_G0029353	Gimap6	97	45.151	Mus_spretus
ENSCAFG00000024858	-	71	56.109	ENSMLUG00000010888	GIMAP6	72	56.190	Myotis_lucifugus
ENSCAFG00000024858	-	75	54.741	ENSNGAG00000009129	Gimap6	75	54.741	Nannospalax_galili
ENSCAFG00000024858	-	59	52.432	ENSMEUG00000003871	-	76	52.432	Notamacropus_eugenii
ENSCAFG00000024858	-	67	59.420	ENSOCUG00000026993	-	61	62.366	Oryctolagus_cuniculus
ENSCAFG00000024858	-	67	59.903	ENSOCUG00000023856	-	61	62.366	Oryctolagus_cuniculus
ENSCAFG00000024858	-	68	54.286	ENSOGAG00000029466	-	71	54.286	Otolemur_garnettii
ENSCAFG00000024858	-	88	56.777	ENSOARG00000001356	-	79	56.777	Ovis_aries
ENSCAFG00000024858	-	71	60.360	ENSPPAG00000033178	GIMAP6	72	60.190	Pan_paniscus
ENSCAFG00000024858	-	64	60.000	ENSPTRG00000019860	GIMAP6	56	60.000	Pan_troglodytes
ENSCAFG00000024858	-	71	60.360	ENSPTRG00000045753	-	72	60.190	Pan_troglodytes
ENSCAFG00000024858	-	71	61.086	ENSPANG00000032121	GIMAP6	72	61.137	Papio_anubis
ENSCAFG00000024858	-	92	47.703	ENSPEMG00000011262	Gimap6	91	47.703	Peromyscus_maniculatus_bairdii
ENSCAFG00000024858	-	59	38.021	ENSPCIG00000016010	-	56	37.696	Phascolarctos_cinereus
ENSCAFG00000024858	-	64	65.152	ENSPPYG00000029783	-	64	65.241	Pongo_abelii
ENSCAFG00000024858	-	64	60.406	ENSPCOG00000027875	-	79	61.081	Propithecus_coquereli
ENSCAFG00000024858	-	97	44.695	ENSRNOG00000033338	Gimap6	99	44.695	Rattus_norvegicus
ENSCAFG00000024858	-	67	63.768	ENSRBIG00000031547	GIMAP6	72	60.664	Rhinopithecus_bieti
ENSCAFG00000024858	-	71	59.459	ENSRROG00000045462	GIMAP6	72	60.664	Rhinopithecus_roxellana
ENSCAFG00000024858	-	64	63.131	ENSSBOG00000022715	GIMAP6	63	63.978	Saimiri_boliviensis_boliviensis
ENSCAFG00000024858	-	57	53.073	ENSSHAG00000000570	-	67	53.073	Sarcophilus_harrisii
ENSCAFG00000024858	-	71	56.109	ENSSARG00000000290	-	70	57.561	Sorex_araneus
ENSCAFG00000024858	-	62	57.592	ENSSARG00000011388	-	73	57.592	Sorex_araneus
ENSCAFG00000024858	-	87	58.148	ENSSSCG00000027196	-	93	57.407	Sus_scrofa
ENSCAFG00000024858	-	53	68.098	ENSTTRG00000017002	-	56	62.963	Tursiops_truncatus
ENSCAFG00000024858	-	54	80.606	ENSUAMG00000002021	-	66	74.603	Ursus_americanus
ENSCAFG00000024858	-	54	78.182	ENSUAMG00000000534	-	66	72.487	Ursus_americanus
ENSCAFG00000024858	-	54	80.606	ENSUAMG00000004052	-	66	74.603	Ursus_americanus
ENSCAFG00000024858	-	83	69.922	ENSUAMG00000005395	-	92	66.429	Ursus_americanus
ENSCAFG00000024858	-	83	69.141	ENSUAMG00000003158	-	92	65.714	Ursus_americanus
ENSCAFG00000024858	-	56	77.011	ENSUMAG00000000464	-	84	77.011	Ursus_maritimus
ENSCAFG00000024858	-	83	96.094	ENSVVUG00000009155	-	63	94.141	Vulpes_vulpes