EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAFG00000025525 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: U1 small nuclear ribonucleoprotein C pseudogene
Gene Type: protein_coding
Species: Canis_familiaris
Status: putative
Strand: Minus strand
Length: 480 bases
Position: chr33:10139457-10139936
Accession: 100682636
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00000035629	zf-U1	PF06220.12	3.6e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00000039736	-	480	XM_005639434	ENSCAFP00000035629	159 (aa)	XP_005639491	E2QWB9

Gene Model

Click here to download ENSCAFG00000025525's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00000025525's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAFG00000025525	-	100	76.730	ENSCAFG00000031775	-	100	76.730
ENSCAFG00000025525	-	100	70.807	ENSCAFG00000028988	-	100	70.186

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00000025525	-	100	78.616	ENSG00000124562	SNRPC	100	78.616	Homo_sapiens
ENSCAFG00000025525	-	100	76.730	ENSAMEG00000000963	SNRPC	87	77.707	Ailuropoda_melanoleuca
ENSCAFG00000025525	-	100	75.472	ENSACAG00000015721	SNRPC	87	76.433	Anolis_carolinensis
ENSCAFG00000025525	-	100	61.878	ENSANAG00000019157	-	100	77.358	Aotus_nancymaae
ENSCAFG00000025525	-	99	73.418	ENSANAG00000020588	-	92	73.418	Aotus_nancymaae
ENSCAFG00000025525	-	100	67.925	ENSANAG00000021026	-	100	63.522	Aotus_nancymaae
ENSCAFG00000025525	-	100	78.616	ENSANAG00000019696	-	100	78.616	Aotus_nancymaae
ENSCAFG00000025525	-	100	69.811	ENSANAG00000019726	-	92	71.698	Aotus_nancymaae
ENSCAFG00000025525	-	100	78.616	ENSANAG00000007843	-	100	78.616	Aotus_nancymaae
ENSCAFG00000025525	-	100	59.119	ENSANAG00000021444	-	100	57.862	Aotus_nancymaae
ENSCAFG00000025525	-	100	54.696	ENSAMXG00000032641	snrpc	87	69.375	Astyanax_mexicanus
ENSCAFG00000025525	-	100	78.616	ENSBTAG00000024549	SNRPC	100	78.616	Bos_taurus
ENSCAFG00000025525	-	100	76.101	ENSCJAG00000041822	-	100	76.101	Callithrix_jacchus
ENSCAFG00000025525	-	100	78.616	ENSCJAG00000015321	-	100	78.616	Callithrix_jacchus
ENSCAFG00000025525	-	100	77.358	ENSCJAG00000043055	-	100	77.358	Callithrix_jacchus
ENSCAFG00000025525	-	100	58.989	ENSCAFG00020026577	-	100	60.112	Canis_lupus_dingo
ENSCAFG00000025525	-	100	78.616	ENSCAFG00020005945	-	100	78.616	Canis_lupus_dingo
ENSCAFG00000025525	-	99	68.153	ENSCAFG00020009944	-	90	59.259	Canis_lupus_dingo
ENSCAFG00000025525	-	100	76.730	ENSCAFG00020017383	-	100	76.730	Canis_lupus_dingo
ENSCAFG00000025525	-	100	77.358	ENSCAFG00020005758	-	99	77.707	Canis_lupus_dingo
ENSCAFG00000025525	-	100	77.987	ENSCHIG00000012087	-	100	77.987	Capra_hircus
ENSCAFG00000025525	-	100	68.553	ENSCHIG00000005039	-	100	68.553	Capra_hircus
ENSCAFG00000025525	-	100	66.667	ENSTSYG00000025721	-	100	65.409	Carlito_syrichta
ENSCAFG00000025525	-	98	71.795	ENSTSYG00000029745	-	78	71.795	Carlito_syrichta
ENSCAFG00000025525	-	100	78.616	ENSTSYG00000011216	-	100	78.616	Carlito_syrichta
ENSCAFG00000025525	-	89	76.761	ENSCAPG00000005161	SNRPC	100	76.761	Cavia_aperea
ENSCAFG00000025525	-	100	78.616	ENSCPOG00000008563	SNRPC	100	78.616	Cavia_porcellus
ENSCAFG00000025525	-	100	57.233	ENSCCAG00000028293	-	100	55.975	Cebus_capucinus
ENSCAFG00000025525	-	98	60.897	ENSCCAG00000022209	-	95	60.256	Cebus_capucinus
ENSCAFG00000025525	-	100	76.730	ENSCCAG00000036059	-	89	76.730	Cebus_capucinus
ENSCAFG00000025525	-	99	64.331	ENSCCAG00000026624	-	66	64.331	Cebus_capucinus
ENSCAFG00000025525	-	98	75.000	ENSCCAG00000022751	-	95	75.000	Cebus_capucinus
ENSCAFG00000025525	-	100	78.616	ENSCATG00000035787	SNRPC	100	78.616	Cercocebus_atys
ENSCAFG00000025525	-	99	66.242	ENSCLAG00000010242	-	96	63.291	Chinchilla_lanigera
ENSCAFG00000025525	-	100	78.616	ENSCLAG00000016920	SNRPC	100	78.616	Chinchilla_lanigera
ENSCAFG00000025525	-	100	59.551	ENSCSAG00000009821	SNRPC	100	60.674	Chlorocebus_sabaeus
ENSCAFG00000025525	-	100	57.225	ENSCHOG00000011439	SNRPC	88	65.605	Choloepus_hoffmanni
ENSCAFG00000025525	-	100	77.358	ENSCPBG00000027142	SNRPC	100	77.358	Chrysemys_picta_bellii
ENSCAFG00000025525	-	100	78.616	ENSCANG00000028035	SNRPC	100	78.616	Colobus_angolensis_palliatus
ENSCAFG00000025525	-	100	69.182	ENSCGRG00001021483	-	100	69.182	Cricetulus_griseus_chok1gshd
ENSCAFG00000025525	-	100	77.987	ENSCGRG00001009011	-	100	77.987	Cricetulus_griseus_chok1gshd
ENSCAFG00000025525	-	100	76.101	ENSCGRG00000005005	Snrpc	99	77.070	Cricetulus_griseus_crigri
ENSCAFG00000025525	-	100	49.724	ENSDARG00000009871	snrpc	100	69.375	Danio_rerio
ENSCAFG00000025525	-	100	77.358	ENSDNOG00000034699	-	99	77.358	Dasypus_novemcinctus
ENSCAFG00000025525	-	50	86.076	ENSDNOG00000042403	-	70	85.185	Dasypus_novemcinctus
ENSCAFG00000025525	-	100	67.296	ENSDORG00000005955	Snrpc	66	68.790	Dipodomys_ordii
ENSCAFG00000025525	-	95	65.563	ENSDORG00000029823	-	100	65.563	Dipodomys_ordii
ENSCAFG00000025525	-	50	81.013	ENSETEG00000008756	-	79	80.247	Echinops_telfairi
ENSCAFG00000025525	-	98	74.359	ENSETEG00000011265	-	100	74.359	Echinops_telfairi
ENSCAFG00000025525	-	99	48.765	ENSEBUG00000011445	snrpc	92	43.210	Eptatretus_burgeri
ENSCAFG00000025525	-	100	78.616	ENSEASG00005021007	SNRPC	100	78.616	Equus_asinus_asinus
ENSCAFG00000025525	-	100	78.616	ENSECAG00000026848	SNRPC	100	78.616	Equus_caballus
ENSCAFG00000025525	-	100	48.619	ENSELUG00000000815	SNRPC	100	66.875	Esox_lucius
ENSCAFG00000025525	-	100	63.190	ENSELUG00000020489	snrpc	100	57.927	Esox_lucius
ENSCAFG00000025525	-	100	78.616	ENSFCAG00000044077	-	100	78.616	Felis_catus
ENSCAFG00000025525	-	100	77.987	ENSFALG00000003756	SNRPC	100	77.987	Ficedula_albicollis
ENSCAFG00000025525	-	100	78.616	ENSFDAG00000018111	SNRPC	100	78.616	Fukomys_damarensis
ENSCAFG00000025525	-	100	76.250	ENSGALG00000002773	SNRPC	100	76.250	Gallus_gallus
ENSCAFG00000025525	-	100	77.358	ENSGAGG00000003063	SNRPC	100	77.358	Gopherus_agassizii
ENSCAFG00000025525	-	100	78.616	ENSGGOG00000012499	SNRPC	100	78.616	Gorilla_gorilla
ENSCAFG00000025525	-	81	61.240	ENSHGLG00000005871	-	100	61.635	Heterocephalus_glaber_female
ENSCAFG00000025525	-	100	78.616	ENSHGLG00000013981	SNRPC	100	78.616	Heterocephalus_glaber_female
ENSCAFG00000025525	-	100	57.647	ENSHGLG00000017741	-	100	66.667	Heterocephalus_glaber_female
ENSCAFG00000025525	-	100	78.616	ENSHGLG00100009478	SNRPC	100	78.616	Heterocephalus_glaber_male
ENSCAFG00000025525	-	100	57.647	ENSHGLG00100010786	-	100	66.667	Heterocephalus_glaber_male
ENSCAFG00000025525	-	100	74.843	ENSHGLG00100017764	-	100	74.843	Heterocephalus_glaber_male
ENSCAFG00000025525	-	100	54.144	ENSIPUG00000024851	snrpc	100	68.553	Ictalurus_punctatus
ENSCAFG00000025525	-	100	78.616	ENSSTOG00000013786	SNRPC	100	78.616	Ictidomys_tridecemlineatus
ENSCAFG00000025525	-	100	77.987	ENSJJAG00000021741	Snrpc	100	77.987	Jaculus_jaculus
ENSCAFG00000025525	-	74	71.186	ENSLACG00000013753	SNRPC	88	74.051	Latimeria_chalumnae
ENSCAFG00000025525	-	100	78.616	ENSLAFG00000013534	SNRPC	100	78.616	Loxodonta_africana
ENSCAFG00000025525	-	100	78.616	ENSMFAG00000031764	-	100	78.616	Macaca_fascicularis
ENSCAFG00000025525	-	100	78.616	ENSMFAG00000030525	-	100	78.616	Macaca_fascicularis
ENSCAFG00000025525	-	100	77.358	ENSMMUG00000039415	-	100	77.358	Macaca_mulatta
ENSCAFG00000025525	-	100	72.327	ENSMMUG00000045425	-	100	72.327	Macaca_mulatta
ENSCAFG00000025525	-	100	77.358	ENSMMUG00000000869	-	95	78.205	Macaca_mulatta
ENSCAFG00000025525	-	100	78.616	ENSMNEG00000032731	SNRPC	100	78.616	Macaca_nemestrina
ENSCAFG00000025525	-	97	59.615	ENSMLEG00000039724	-	81	52.830	Mandrillus_leucophaeus
ENSCAFG00000025525	-	100	78.616	ENSMLEG00000033916	-	100	78.616	Mandrillus_leucophaeus
ENSCAFG00000025525	-	97	74.194	ENSMLEG00000040224	-	89	74.194	Mandrillus_leucophaeus
ENSCAFG00000025525	-	100	75.472	ENSMGAG00000006054	SNRPC	100	76.730	Meleagris_gallopavo
ENSCAFG00000025525	-	100	65.409	ENSMICG00000036552	-	87	71.154	Microcebus_murinus
ENSCAFG00000025525	-	100	77.500	ENSMICG00000007339	-	100	78.616	Microcebus_murinus
ENSCAFG00000025525	-	100	78.616	ENSMICG00000032183	-	100	78.616	Microcebus_murinus
ENSCAFG00000025525	-	100	74.214	ENSMICG00000009130	-	100	71.069	Microcebus_murinus
ENSCAFG00000025525	-	100	77.987	ENSMOCG00000017609	Snrpc	100	77.987	Microtus_ochrogaster
ENSCAFG00000025525	-	100	77.987	ENSMODG00000013904	-	100	77.987	Monodelphis_domestica
ENSCAFG00000025525	-	100	57.233	ENSMALG00000001197	snrpc	100	58.385	Monopterus_albus
ENSCAFG00000025525	-	100	77.987	MGP_CAROLIEiJ_G0021308	Snrpc	100	77.987	Mus_caroli
ENSCAFG00000025525	-	100	77.987	ENSMUSG00000024217	Snrpc	100	77.987	Mus_musculus
ENSCAFG00000025525	-	100	76.730	ENSMPUG00000003210	SNRPC	99	77.707	Mustela_putorius_furo
ENSCAFG00000025525	-	100	76.730	ENSMLUG00000002488	SNRPC	99	77.707	Myotis_lucifugus
ENSCAFG00000025525	-	100	77.987	ENSNGAG00000019686	Snrpc	100	77.987	Nannospalax_galili
ENSCAFG00000025525	-	100	78.616	ENSNLEG00000034810	SNRPC	100	78.616	Nomascus_leucogenys
ENSCAFG00000025525	-	89	76.056	ENSMEUG00000009300	SNRPC	100	76.056	Notamacropus_eugenii
ENSCAFG00000025525	-	100	77.987	ENSODEG00000020201	-	100	77.987	Octodon_degus
ENSCAFG00000025525	-	100	78.616	ENSODEG00000018985	-	100	78.616	Octodon_degus
ENSCAFG00000025525	-	100	78.616	ENSODEG00000020370	-	100	78.616	Octodon_degus
ENSCAFG00000025525	-	100	77.358	ENSODEG00000019633	-	100	77.358	Octodon_degus
ENSCAFG00000025525	-	100	78.616	ENSODEG00000017080	-	100	78.616	Octodon_degus
ENSCAFG00000025525	-	89	73.973	ENSOANG00000003405	SNRPC	100	72.973	Ornithorhynchus_anatinus
ENSCAFG00000025525	-	100	78.616	ENSOCUG00000026668	-	100	78.616	Oryctolagus_cuniculus
ENSCAFG00000025525	-	100	77.987	ENSOCUG00000026430	-	99	77.987	Oryctolagus_cuniculus
ENSCAFG00000025525	-	97	78.065	ENSOGAG00000008755	-	88	77.707	Otolemur_garnettii
ENSCAFG00000025525	-	97	65.584	ENSOGAG00000028405	-	99	65.584	Otolemur_garnettii
ENSCAFG00000025525	-	100	76.730	ENSOGAG00000026269	-	100	76.730	Otolemur_garnettii
ENSCAFG00000025525	-	100	78.616	ENSOARG00000010823	SNRPC	100	78.616	Ovis_aries
ENSCAFG00000025525	-	100	78.616	ENSPPAG00000043871	SNRPC	100	78.616	Pan_paniscus
ENSCAFG00000025525	-	100	57.233	ENSPPRG00000010967	-	89	50.314	Panthera_pardus
ENSCAFG00000025525	-	96	49.020	ENSPPRG00000016017	-	86	46.405	Panthera_pardus
ENSCAFG00000025525	-	100	78.616	ENSPPRG00000008647	-	100	78.616	Panthera_pardus
ENSCAFG00000025525	-	100	49.375	ENSPTIG00000011880	-	88	38.365	Panthera_tigris_altaica
ENSCAFG00000025525	-	97	53.548	ENSPTIG00000013329	-	51	72.152	Panthera_tigris_altaica
ENSCAFG00000025525	-	100	78.616	ENSPTIG00000021867	-	100	78.616	Panthera_tigris_altaica
ENSCAFG00000025525	-	100	78.616	ENSPTRG00000018070	SNRPC	100	78.616	Pan_troglodytes
ENSCAFG00000025525	-	100	78.616	ENSPANG00000022802	-	100	78.616	Papio_anubis
ENSCAFG00000025525	-	100	71.069	ENSPANG00000018228	-	94	71.069	Papio_anubis
ENSCAFG00000025525	-	100	54.396	ENSPKIG00000001671	SNRPC	100	68.125	Paramormyrops_kingsleyae
ENSCAFG00000025525	-	99	75.796	ENSPSIG00000004876	SNRPC	77	75.796	Pelodiscus_sinensis
ENSCAFG00000025525	-	98	55.128	ENSPMGG00000022162	snrpc	100	55.975	Periophthalmus_magnuspinnatus
ENSCAFG00000025525	-	100	77.987	ENSPEMG00000010773	Snrpc	100	77.987	Peromyscus_maniculatus_bairdii
ENSCAFG00000025525	-	100	70.440	ENSPEMG00000002763	-	100	67.683	Peromyscus_maniculatus_bairdii
ENSCAFG00000025525	-	99	59.873	ENSPMAG00000000602	snrpc	98	56.051	Petromyzon_marinus
ENSCAFG00000025525	-	50	86.076	ENSPPYG00000029902	-	82	85.185	Pongo_abelii
ENSCAFG00000025525	-	100	76.730	ENSPCAG00000016885	SNRPC	90	77.707	Procavia_capensis
ENSCAFG00000025525	-	100	78.616	ENSPCOG00000004904	SNRPC	100	78.616	Propithecus_coquereli
ENSCAFG00000025525	-	100	76.101	ENSPVAG00000015597	SNRPC	87	77.070	Pteropus_vampyrus
ENSCAFG00000025525	-	100	54.444	ENSPNAG00000012799	snrpc	100	65.625	Pygocentrus_nattereri
ENSCAFG00000025525	-	100	77.987	ENSRNOG00000000493	Snrpc	100	77.987	Rattus_norvegicus
ENSCAFG00000025525	-	100	77.987	ENSRBIG00000022998	-	100	77.987	Rhinopithecus_bieti
ENSCAFG00000025525	-	100	72.956	ENSRBIG00000036353	-	83	72.956	Rhinopithecus_bieti
ENSCAFG00000025525	-	100	78.616	ENSRBIG00000037567	-	100	78.616	Rhinopithecus_bieti
ENSCAFG00000025525	-	100	80.000	ENSRBIG00000014819	-	100	73.125	Rhinopithecus_bieti
ENSCAFG00000025525	-	100	78.616	ENSRROG00000041300	SNRPC	100	78.616	Rhinopithecus_roxellana
ENSCAFG00000025525	-	95	65.563	ENSSBOG00000032361	-	94	65.563	Saimiri_boliviensis_boliviensis
ENSCAFG00000025525	-	98	67.949	ENSSBOG00000023189	-	91	67.949	Saimiri_boliviensis_boliviensis
ENSCAFG00000025525	-	100	78.616	ENSSBOG00000031528	-	100	78.616	Saimiri_boliviensis_boliviensis
ENSCAFG00000025525	-	98	70.513	ENSSBOG00000032882	-	93	67.308	Saimiri_boliviensis_boliviensis
ENSCAFG00000025525	-	99	77.070	ENSSHAG00000000945	-	87	77.070	Sarcophilus_harrisii
ENSCAFG00000025525	-	50	78.750	ENSSFOG00015019150	snrpc	100	60.366	Scleropages_formosus
ENSCAFG00000025525	-	100	64.151	ENSSARG00000008970	SNRPC	89	64.151	Sorex_araneus
ENSCAFG00000025525	-	100	77.358	ENSSPUG00000002502	SNRPC	100	77.358	Sphenodon_punctatus
ENSCAFG00000025525	-	100	78.616	ENSSSCG00000001531	SNRPC	100	78.616	Sus_scrofa
ENSCAFG00000025525	-	100	76.730	ENSTGUG00000001773	SNRPC	99	77.215	Taeniopygia_guttata
ENSCAFG00000025525	-	100	57.233	ENSTRUG00000021651	snrpc	100	57.233	Takifugu_rubripes
ENSCAFG00000025525	-	100	55.030	ENSTNIG00000018307	snrpc	100	61.491	Tetraodon_nigroviridis
ENSCAFG00000025525	-	98	74.359	ENSTBEG00000013022	-	100	65.839	Tupaia_belangeri
ENSCAFG00000025525	-	100	76.730	ENSTTRG00000007827	SNRPC	86	77.707	Tursiops_truncatus
ENSCAFG00000025525	-	89	61.972	ENSVPAG00000003106	SNRPC	79	61.972	Vicugna_pacos
ENSCAFG00000025525	-	97	75.974	ENSVVUG00000010467	-	87	76.282	Vulpes_vulpes
ENSCAFG00000025525	-	100	77.358	ENSVVUG00000021947	-	100	77.358	Vulpes_vulpes
ENSCAFG00000025525	-	100	71.698	ENSXETG00000024721	snrpc	100	71.698	Xenopus_tropicalis