EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAFG00000028825 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Canis_familiaris
Status: putative
Strand: Plus strand
Length: 943 bases
Position: chr1:38396258-38397200
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00000042537	Ribosomal_L23	PF00276.20	4e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00000047313	-	378	-	ENSCAFP00000042537	126 (aa)	-	J9P9V4

Gene Model

Click here to download ENSCAFG00000028825's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00000028825's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAFG00000028825	-	79	53.922	ENSCAFG00000030594	-	58	55.435
ENSCAFG00000028825	-	92	57.500	ENSCAFG00000018784	-	80	58.400
ENSCAFG00000028825	-	59	54.545	ENSCAFG00000003985	-	53	54.545
ENSCAFG00000028825	-	59	66.234	ENSCAFG00000003753	-	51	66.234
ENSCAFG00000028825	-	92	56.667	ENSCAFG00000002548	-	80	57.600
ENSCAFG00000028825	-	99	45.139	ENSCAFG00000001011	-	83	46.875
ENSCAFG00000028825	-	92	57.500	ENSCAFG00000016268	-	80	58.400
ENSCAFG00000028825	-	94	49.587	ENSCAFG00000007256	-	57	58.824
ENSCAFG00000028825	-	92	56.667	ENSCAFG00000015394	-	80	57.600
ENSCAFG00000028825	-	89	46.957	ENSCAFG00000007718	-	62	56.962
ENSCAFG00000028825	-	68	61.798	ENSCAFG00000017753	-	58	61.798
ENSCAFG00000028825	-	92	57.500	ENSCAFG00000031731	-	80	58.400
ENSCAFG00000028825	-	96	55.200	ENSCAFG00000024427	-	56	65.517
ENSCAFG00000028825	-	100	49.612	ENSCAFG00000019297	-	65	58.696
ENSCAFG00000028825	-	95	52.419	ENSCAFG00000031555	-	56	60.920
ENSCAFG00000028825	-	57	54.054	ENSCAFG00000015308	-	55	51.250
ENSCAFG00000028825	-	71	58.696	ENSCAFG00000000014	-	56	60.920
ENSCAFG00000028825	-	95	56.911	ENSCAFG00000020044	-	80	57.258
ENSCAFG00000028825	-	67	62.069	ENSCAFG00000017678	-	56	62.069
ENSCAFG00000028825	-	95	51.613	ENSCAFG00000030051	-	57	59.770
ENSCAFG00000028825	-	98	53.488	ENSCAFG00000004933	-	63	63.736
ENSCAFG00000028825	-	100	51.389	ENSCAFG00000017449	-	53	69.512
ENSCAFG00000028825	-	95	58.065	ENSCAFG00000001968	-	80	58.400
ENSCAFG00000028825	-	70	56.522	ENSCAFG00000003047	-	61	55.914
ENSCAFG00000028825	-	60	60.256	ENSCAFG00000009706	-	54	60.256
ENSCAFG00000028825	-	96	44.628	ENSCAFG00000003274	-	51	55.405
ENSCAFG00000028825	-	63	58.537	ENSCAFG00000005724	-	55	58.537
ENSCAFG00000028825	-	90	55.645	ENSCAFG00000004370	-	75	55.085
ENSCAFG00000028825	-	87	51.327	ENSCAFG00000018232	-	55	60.000
ENSCAFG00000028825	-	92	57.143	ENSCAFG00000024043	-	55	67.442
ENSCAFG00000028825	-	92	54.167	ENSCAFG00000004003	-	57	64.368
ENSCAFG00000028825	-	78	47.059	ENSCAFG00000004716	-	59	51.136
ENSCAFG00000028825	-	62	61.728	ENSCAFG00000014107	-	53	61.728

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00000028825	-	75	51.579	ENSAMEG00000005208	-	59	53.933	Ailuropoda_melanoleuca
ENSCAFG00000028825	-	66	60.465	ENSCGRG00001011003	-	55	60.465	Cricetulus_griseus_chok1gshd
ENSCAFG00000028825	-	66	60.465	ENSCGRG00000019420	-	55	60.465	Cricetulus_griseus_crigri
ENSCAFG00000028825	-	59	54.545	ENSDNOG00000039276	-	50	54.545	Dasypus_novemcinctus
ENSCAFG00000028825	-	65	45.882	ENSDNOG00000041286	-	54	46.250	Dasypus_novemcinctus
ENSCAFG00000028825	-	54	52.113	MGP_CAROLIEiJ_G0018758	-	59	52.113	Mus_caroli
ENSCAFG00000028825	-	54	54.930	MGP_SPRETEiJ_G0019641	-	59	54.930	Mus_spretus
ENSCAFG00000028825	-	72	51.515	ENSOCUG00000021843	-	66	52.577	Oryctolagus_cuniculus