EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAFG00000029401 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Canis_familiaris
Status: putative
Strand: Minus strand
Length: 1916 bases
Position: chrJH374072.1:1234-3149
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00000043066	zf-C3HC	PF07967.13	7.4e-36	1	1
ENSCAFP00000043066	Rsm1	PF08600.10	2.2e-15	1	2
ENSCAFP00000043066	Rsm1	PF08600.10	2.2e-15	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00000048021	-	1530	-	ENSCAFP00000043066	509 (aa)	-	J9PB87

Gene Model

Click here to download ENSCAFG00000029401's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00000029401's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAFG00000029401	-	99	99.602	ENSCAFG00000031850	-	100	99.602
ENSCAFG00000029401	-	99	100.000	ENSCAFG00000028735	-	100	100.000
ENSCAFG00000029401	-	99	98.043	ENSCAFG00000001499	-	99	98.043

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00000029401	-	98	93.014	ENSG00000091732	ZC3HC1	99	93.014	Homo_sapiens
ENSCAFG00000029401	-	93	44.242	ENSAPOG00000009078	zc3hc1	95	44.040	Acanthochromis_polyacanthus
ENSCAFG00000029401	-	99	93.254	ENSAMEG00000005425	ZC3HC1	100	93.254	Ailuropoda_melanoleuca
ENSCAFG00000029401	-	93	42.828	ENSACIG00000019513	zc3hc1	95	42.656	Amphilophus_citrinellus
ENSCAFG00000029401	-	93	45.051	ENSAOCG00000024310	zc3hc1	95	44.848	Amphiprion_ocellaris
ENSCAFG00000029401	-	93	45.051	ENSAPEG00000004907	zc3hc1	95	44.848	Amphiprion_percula
ENSCAFG00000029401	-	80	48.113	ENSATEG00000016898	zc3hc1	85	47.887	Anabas_testudineus
ENSCAFG00000029401	-	87	60.899	ENSAPLG00000003832	ZC3HC1	99	60.899	Anas_platyrhynchos
ENSCAFG00000029401	-	99	60.769	ENSACAG00000001638	ZC3HC1	100	60.769	Anolis_carolinensis
ENSCAFG00000029401	-	99	90.457	ENSANAG00000022213	ZC3HC1	100	90.457	Aotus_nancymaae
ENSCAFG00000029401	-	87	44.111	ENSACLG00000025033	zc3hc1	98	43.897	Astatotilapia_calliptera
ENSCAFG00000029401	-	93	43.154	ENSAMXG00000036792	zc3hc1	97	42.946	Astyanax_mexicanus
ENSCAFG00000029401	-	99	90.438	ENSBTAG00000011247	ZC3HC1	100	90.438	Bos_taurus
ENSCAFG00000029401	-	99	90.837	ENSCJAG00000010536	ZC3HC1	100	90.837	Callithrix_jacchus
ENSCAFG00000029401	-	99	97.619	ENSCAFG00020023333	-	100	97.619	Canis_lupus_dingo
ENSCAFG00000029401	-	99	99.801	ENSCAFG00020006829	-	100	99.801	Canis_lupus_dingo
ENSCAFG00000029401	-	99	84.263	ENSCHIG00000014103	ZC3HC1	100	84.263	Capra_hircus
ENSCAFG00000029401	-	99	88.845	ENSTSYG00000002843	ZC3HC1	100	88.845	Carlito_syrichta
ENSCAFG00000029401	-	89	63.816	ENSCAPG00000016300	ZC3HC1	93	75.000	Cavia_aperea
ENSCAFG00000029401	-	99	84.661	ENSCPOG00000014034	ZC3HC1	100	84.263	Cavia_porcellus
ENSCAFG00000029401	-	99	74.104	ENSCCAG00000020384	ZC3HC1	100	90.749	Cebus_capucinus
ENSCAFG00000029401	-	99	92.829	ENSCATG00000023130	ZC3HC1	100	92.829	Cercocebus_atys
ENSCAFG00000029401	-	99	60.757	ENSCLAG00000008260	ZC3HC1	100	60.636	Chinchilla_lanigera
ENSCAFG00000029401	-	72	92.077	ENSCSAG00000009881	ZC3HC1	97	92.077	Chlorocebus_sabaeus
ENSCAFG00000029401	-	89	90.466	ENSCHOG00000011846	ZC3HC1	99	90.466	Choloepus_hoffmanni
ENSCAFG00000029401	-	95	69.342	ENSCPBG00000017519	ZC3HC1	100	68.452	Chrysemys_picta_bellii
ENSCAFG00000029401	-	99	92.629	ENSCANG00000029091	ZC3HC1	100	92.629	Colobus_angolensis_palliatus
ENSCAFG00000029401	-	99	88.048	ENSCGRG00001018805	Zc3hc1	100	88.048	Cricetulus_griseus_chok1gshd
ENSCAFG00000029401	-	99	86.853	ENSCGRG00000017114	Zc3hc1	100	86.853	Cricetulus_griseus_crigri
ENSCAFG00000029401	-	94	42.800	ENSCSEG00000009284	zc3hc1	94	42.600	Cynoglossus_semilaevis
ENSCAFG00000029401	-	92	42.623	ENSCVAG00000011566	zc3hc1	94	42.418	Cyprinodon_variegatus
ENSCAFG00000029401	-	94	47.143	ENSDARG00000062651	zc3hc1	95	47.143	Danio_rerio
ENSCAFG00000029401	-	99	89.641	ENSDNOG00000045016	ZC3HC1	100	89.641	Dasypus_novemcinctus
ENSCAFG00000029401	-	99	79.283	ENSDORG00000008697	Zc3hc1	100	79.283	Dipodomys_ordii
ENSCAFG00000029401	-	89	92.257	ENSEASG00005008789	ZC3HC1	97	92.257	Equus_asinus_asinus
ENSCAFG00000029401	-	99	91.849	ENSECAG00000017886	ZC3HC1	100	91.849	Equus_caballus
ENSCAFG00000029401	-	83	82.716	ENSEEUG00000003123	ZC3HC1	84	82.716	Erinaceus_europaeus
ENSCAFG00000029401	-	92	43.611	ENSELUG00000023168	zc3hc1	98	43.605	Esox_lucius
ENSCAFG00000029401	-	99	93.028	ENSFCAG00000010429	ZC3HC1	100	93.028	Felis_catus
ENSCAFG00000029401	-	89	59.829	ENSFALG00000005006	ZC3HC1	100	59.829	Ficedula_albicollis
ENSCAFG00000029401	-	99	87.052	ENSFDAG00000019897	ZC3HC1	100	87.052	Fukomys_damarensis
ENSCAFG00000029401	-	94	42.656	ENSFHEG00000020149	zc3hc1	96	42.105	Fundulus_heteroclitus
ENSCAFG00000029401	-	92	41.458	ENSGMOG00000002914	zc3hc1	95	41.580	Gadus_morhua
ENSCAFG00000029401	-	98	61.753	ENSGALG00000008003	ZC3HC1	99	61.753	Gallus_gallus
ENSCAFG00000029401	-	94	43.750	ENSGAFG00000016095	zc3hc1	96	43.574	Gambusia_affinis
ENSCAFG00000029401	-	92	44.856	ENSGACG00000019706	zc3hc1	94	44.877	Gasterosteus_aculeatus
ENSCAFG00000029401	-	76	70.588	ENSGAGG00000016106	ZC3HC1	100	70.588	Gopherus_agassizii
ENSCAFG00000029401	-	98	92.814	ENSGGOG00000015504	ZC3HC1	99	92.814	Gorilla_gorilla
ENSCAFG00000029401	-	92	43.149	ENSHBUG00000008347	zc3hc1	94	42.945	Haplochromis_burtoni
ENSCAFG00000029401	-	99	88.048	ENSHGLG00000005085	ZC3HC1	100	88.048	Heterocephalus_glaber_female
ENSCAFG00000029401	-	99	87.849	ENSHGLG00100011395	ZC3HC1	100	87.849	Heterocephalus_glaber_male
ENSCAFG00000029401	-	93	43.388	ENSHCOG00000014309	zc3hc1	95	43.093	Hippocampus_comes
ENSCAFG00000029401	-	99	89.641	ENSSTOG00000023599	-	100	89.641	Ictidomys_tridecemlineatus
ENSCAFG00000029401	-	92	44.581	ENSKMAG00000015315	zc3hc1	88	44.172	Kryptolebias_marmoratus
ENSCAFG00000029401	-	93	44.112	ENSLBEG00000017325	zc3hc1	95	43.625	Labrus_bergylta
ENSCAFG00000029401	-	77	55.231	ENSLACG00000013032	ZC3HC1	97	53.771	Latimeria_chalumnae
ENSCAFG00000029401	-	98	51.282	ENSLOCG00000015963	zc3hc1	99	51.575	Lepisosteus_oculatus
ENSCAFG00000029401	-	99	89.130	ENSLAFG00000001292	ZC3HC1	100	89.130	Loxodonta_africana
ENSCAFG00000029401	-	99	93.028	ENSMFAG00000030176	ZC3HC1	100	93.028	Macaca_fascicularis
ENSCAFG00000029401	-	99	92.048	ENSMMUG00000006155	ZC3HC1	100	92.048	Macaca_mulatta
ENSCAFG00000029401	-	99	93.227	ENSMNEG00000011833	ZC3HC1	100	93.227	Macaca_nemestrina
ENSCAFG00000029401	-	99	93.028	ENSMLEG00000027328	ZC3HC1	100	93.028	Mandrillus_leucophaeus
ENSCAFG00000029401	-	94	44.556	ENSMAMG00000010691	zc3hc1	95	44.378	Mastacembelus_armatus
ENSCAFG00000029401	-	92	42.945	ENSMZEG00005007142	zc3hc1	94	42.740	Maylandia_zebra
ENSCAFG00000029401	-	98	60.665	ENSMGAG00000002977	ZC3HC1	99	61.252	Meleagris_gallopavo
ENSCAFG00000029401	-	81	82.169	ENSMAUG00000017032	Zc3hc1	92	82.169	Mesocricetus_auratus
ENSCAFG00000029401	-	99	91.036	ENSMICG00000009167	ZC3HC1	100	91.036	Microcebus_murinus
ENSCAFG00000029401	-	99	87.251	ENSMOCG00000015239	Zc3hc1	100	87.251	Microtus_ochrogaster
ENSCAFG00000029401	-	84	43.459	ENSMMOG00000002204	zc3hc1	98	43.237	Mola_mola
ENSCAFG00000029401	-	99	64.423	ENSMODG00000014630	ZC3HC1	100	64.423	Monodelphis_domestica
ENSCAFG00000029401	-	93	43.265	ENSMALG00000014447	zc3hc1	95	43.800	Monopterus_albus
ENSCAFG00000029401	-	99	87.251	MGP_CAROLIEiJ_G0028183	Zc3hc1	100	87.251	Mus_caroli
ENSCAFG00000029401	-	99	86.653	ENSMUSG00000039130	Zc3hc1	100	86.653	Mus_musculus
ENSCAFG00000029401	-	99	80.876	MGP_PahariEiJ_G0021941	Zc3hc1	100	80.876	Mus_pahari
ENSCAFG00000029401	-	99	86.653	MGP_SPRETEiJ_G0029183	Zc3hc1	100	86.653	Mus_spretus
ENSCAFG00000029401	-	94	93.737	ENSMPUG00000005297	ZC3HC1	95	93.737	Mustela_putorius_furo
ENSCAFG00000029401	-	66	85.131	ENSMLUG00000029228	-	99	85.131	Myotis_lucifugus
ENSCAFG00000029401	-	99	90.495	ENSMLUG00000000063	-	100	90.495	Myotis_lucifugus
ENSCAFG00000029401	-	99	87.873	ENSNGAG00000019014	Zc3hc1	100	87.873	Nannospalax_galili
ENSCAFG00000029401	-	92	43.033	ENSNBRG00000004577	zc3hc1	94	42.828	Neolamprologus_brichardi
ENSCAFG00000029401	-	98	91.417	ENSNLEG00000012698	ZC3HC1	99	91.417	Nomascus_leucogenys
ENSCAFG00000029401	-	99	78.287	ENSMEUG00000011023	ZC3HC1	98	79.352	Notamacropus_eugenii
ENSCAFG00000029401	-	64	80.620	ENSOPRG00000007867	-	67	80.620	Ochotona_princeps
ENSCAFG00000029401	-	99	84.263	ENSODEG00000014604	ZC3HC1	100	84.551	Octodon_degus
ENSCAFG00000029401	-	92	43.354	ENSONIG00000011644	zc3hc1	94	43.149	Oreochromis_niloticus
ENSCAFG00000029401	-	89	68.750	ENSOANG00000011460	ZC3HC1	100	68.750	Ornithorhynchus_anatinus
ENSCAFG00000029401	-	99	85.149	ENSOCUG00000017137	ZC3HC1	100	85.149	Oryctolagus_cuniculus
ENSCAFG00000029401	-	94	43.293	ENSORLG00000014409	zc3hc1	94	43.293	Oryzias_latipes
ENSCAFG00000029401	-	94	43.089	ENSORLG00020015874	zc3hc1	94	43.089	Oryzias_latipes_hni
ENSCAFG00000029401	-	94	42.683	ENSORLG00015014641	zc3hc1	94	42.683	Oryzias_latipes_hsok
ENSCAFG00000029401	-	94	44.813	ENSOMEG00000000215	zc3hc1	95	44.764	Oryzias_melastigma
ENSCAFG00000029401	-	94	44.813	ENSOMEG00000020604	zc3hc1	95	44.764	Oryzias_melastigma
ENSCAFG00000029401	-	99	85.458	ENSOGAG00000026193	ZC3HC1	100	85.458	Otolemur_garnettii
ENSCAFG00000029401	-	99	90.570	ENSOARG00000004907	ZC3HC1	99	90.570	Ovis_aries
ENSCAFG00000029401	-	98	93.014	ENSPPAG00000043172	ZC3HC1	99	93.014	Pan_paniscus
ENSCAFG00000029401	-	99	92.430	ENSPPRG00000001004	ZC3HC1	100	92.430	Panthera_pardus
ENSCAFG00000029401	-	99	93.028	ENSPTIG00000007823	ZC3HC1	100	93.028	Panthera_tigris_altaica
ENSCAFG00000029401	-	98	92.615	ENSPTRG00000019685	ZC3HC1	99	92.615	Pan_troglodytes
ENSCAFG00000029401	-	99	91.650	ENSPANG00000014229	ZC3HC1	100	91.650	Papio_anubis
ENSCAFG00000029401	-	93	48.233	ENSPKIG00000007172	zc3hc1	95	48.233	Paramormyrops_kingsleyae
ENSCAFG00000029401	-	92	63.466	ENSPSIG00000016646	ZC3HC1	100	61.014	Pelodiscus_sinensis
ENSCAFG00000029401	-	93	40.927	ENSPMGG00000003548	zc3hc1	95	41.331	Periophthalmus_magnuspinnatus
ENSCAFG00000029401	-	99	88.048	ENSPEMG00000000514	Zc3hc1	100	88.048	Peromyscus_maniculatus_bairdii
ENSCAFG00000029401	-	98	75.848	ENSPCIG00000020619	ZC3HC1	100	78.920	Phascolarctos_cinereus
ENSCAFG00000029401	-	94	43.548	ENSPFOG00000003466	zc3hc1	96	43.373	Poecilia_formosa
ENSCAFG00000029401	-	94	43.145	ENSPLAG00000022211	zc3hc1	96	42.972	Poecilia_latipinna
ENSCAFG00000029401	-	94	43.548	ENSPMEG00000001458	zc3hc1	96	43.373	Poecilia_mexicana
ENSCAFG00000029401	-	94	43.347	ENSPREG00000004004	zc3hc1	96	43.173	Poecilia_reticulata
ENSCAFG00000029401	-	98	85.089	ENSPPYG00000017998	ZC3HC1	99	85.089	Pongo_abelii
ENSCAFG00000029401	-	90	85.000	ENSPCAG00000001182	ZC3HC1	100	85.000	Procavia_capensis
ENSCAFG00000029401	-	99	92.032	ENSPCOG00000017354	ZC3HC1	100	92.032	Propithecus_coquereli
ENSCAFG00000029401	-	99	84.861	ENSPVAG00000003195	ZC3HC1	100	84.861	Pteropus_vampyrus
ENSCAFG00000029401	-	92	42.945	ENSPNYG00000020692	zc3hc1	94	42.740	Pundamilia_nyererei
ENSCAFG00000029401	-	92	44.748	ENSPNAG00000020746	zc3hc1	95	44.328	Pygocentrus_nattereri
ENSCAFG00000029401	-	99	86.481	ENSRNOG00000010154	Zc3hc1	100	86.481	Rattus_norvegicus
ENSCAFG00000029401	-	89	92.715	ENSRBIG00000029409	ZC3HC1	100	92.715	Rhinopithecus_bieti
ENSCAFG00000029401	-	99	92.629	ENSRROG00000041831	ZC3HC1	100	92.629	Rhinopithecus_roxellana
ENSCAFG00000029401	-	87	90.441	ENSSBOG00000032787	ZC3HC1	100	90.441	Saimiri_boliviensis_boliviensis
ENSCAFG00000029401	-	91	78.710	ENSSHAG00000002529	ZC3HC1	100	78.710	Sarcophilus_harrisii
ENSCAFG00000029401	-	93	48.875	ENSSFOG00015003667	zc3hc1	91	47.648	Scleropages_formosus
ENSCAFG00000029401	-	94	43.838	ENSSMAG00000000647	zc3hc1	86	44.444	Scophthalmus_maximus
ENSCAFG00000029401	-	93	45.214	ENSSDUG00000004241	zc3hc1	93	45.030	Seriola_dumerili
ENSCAFG00000029401	-	93	45.010	ENSSLDG00000025056	zc3hc1	93	44.828	Seriola_lalandi_dorsalis
ENSCAFG00000029401	-	98	80.240	ENSSARG00000012013	ZC3HC1	99	80.240	Sorex_araneus
ENSCAFG00000029401	-	84	58.447	ENSSPUG00000000778	ZC3HC1	86	58.447	Sphenodon_punctatus
ENSCAFG00000029401	-	93	45.436	ENSSPAG00000020041	zc3hc1	95	45.253	Stegastes_partitus
ENSCAFG00000029401	-	99	90.040	ENSSSCG00000016565	ZC3HC1	100	90.040	Sus_scrofa
ENSCAFG00000029401	-	92	41.922	ENSTRUG00000020077	zc3hc1	95	41.700	Takifugu_rubripes
ENSCAFG00000029401	-	93	42.268	ENSTNIG00000007585	zc3hc1	99	42.505	Tetraodon_nigroviridis
ENSCAFG00000029401	-	98	80.639	ENSTBEG00000005216	ZC3HC1	99	80.639	Tupaia_belangeri
ENSCAFG00000029401	-	94	90.833	ENSTTRG00000008458	ZC3HC1	100	90.833	Tursiops_truncatus
ENSCAFG00000029401	-	99	94.024	ENSUAMG00000020249	ZC3HC1	100	94.024	Ursus_americanus
ENSCAFG00000029401	-	99	93.426	ENSUMAG00000009268	ZC3HC1	100	93.426	Ursus_maritimus
ENSCAFG00000029401	-	77	94.000	ENSVPAG00000010846	ZC3HC1	77	94.000	Vicugna_pacos
ENSCAFG00000029401	-	94	98.750	ENSVVUG00000012386	ZC3HC1	99	98.750	Vulpes_vulpes
ENSCAFG00000029401	-	90	53.004	ENSXETG00000033900	zc3hc1	95	53.004	Xenopus_tropicalis
ENSCAFG00000029401	-	94	43.030	ENSXCOG00000013570	zc3hc1	96	42.857	Xiphophorus_couchianus
ENSCAFG00000029401	-	86	45.154	ENSXMAG00000010979	zc3hc1	95	44.902	Xiphophorus_maculatus