EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCAFG00000029761 (Gene tree)
Gene ID: 613001
Gene Symbol: PRPF38B
Alias: -
Full Name: pre-mRNA processing factor 38B
Gene Type: protein_coding
Species: Canis_familiaris
Status: putative
Strand: Minus strand
Length: 11012 bases
Position: chr6:43041536-43052547
Accession: 45023
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00000038656	PRP38	PF03371.15	1.4e-57	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00000046306	-	5626	XM_849600	ENSCAFP00000038656	548 (aa)	XP_854693	J9NZD6

Gene Model

Click here to download ENSCAFG00000029761's gene model file

Pathways

Pathway ID	Pathway Name	Source
cfa03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00000029761's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00000029761	PRPF38B	100	96.898	ENSAMEG00000004364	-	100	96.898	Ailuropoda_melanoleuca
ENSCAFG00000029761	PRPF38B	100	97.810	ENSEASG00005000210	PRPF38B	100	97.810	Equus_asinus_asinus
ENSCAFG00000029761	PRPF38B	100	99.088	ENSFCAG00000039965	PRPF38B	100	99.088	Felis_catus
ENSCAFG00000029761	PRPF38B	100	97.273	ENSSTOG00000025032	PRPF38B	100	97.273	Ictidomys_tridecemlineatus
ENSCAFG00000029761	PRPF38B	100	99.089	ENSMPUG00000002738	PRPF38B	100	99.089	Mustela_putorius_furo
ENSCAFG00000029761	PRPF38B	100	89.818	ENSNGAG00000011476	-	100	90.710	Nannospalax_galili
ENSCAFG00000029761	PRPF38B	95	99.035	ENSPTIG00000015015	PRPF38B	98	99.035	Panthera_tigris_altaica
ENSCAFG00000029761	PRPF38B	100	99.636	ENSVVUG00000000684	-	100	99.636	Vulpes_vulpes