EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAFG00000031044 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Canis_familiaris
Status: putative
Strand: Minus strand
Length: 951 bases
Position: chr23:2632682-2633632
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00000007109	RRM_1	PF00076.22	4.2e-14	1	2
ENSCAFP00000007109	RRM_1	PF00076.22	4.2e-14	2	2
ENSCAFP00000007109	HnRNPA1	PF11627.8	3e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00000007675	-	930	-	ENSCAFP00000007109	309 (aa)	-	F1PD20

Gene Model

Click here to download ENSCAFG00000031044's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00000031044's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAFG00000031044	-	100	75.710	ENSCAFG00000000389	-	100	78.549
ENSCAFG00000031044	-	88	67.719	ENSCAFG00000000687	-	94	67.123
ENSCAFG00000031044	-	94	66.667	ENSCAFG00000005164	-	92	66.337
ENSCAFG00000031044	-	100	99.353	ENSCAFG00000030783	-	100	99.353
ENSCAFG00000031044	-	58	53.968	ENSCAFG00000002885	HNRNPA2B1	94	45.745
ENSCAFG00000031044	-	100	66.978	ENSCAFG00000032455	-	100	68.536
ENSCAFG00000031044	-	63	56.585	ENSCAFG00000005307	-	84	56.250
ENSCAFG00000031044	-	94	57.658	ENSCAFG00000025274	-	74	83.673
ENSCAFG00000031044	-	92	48.611	ENSCAFG00000017424	-	100	48.443
ENSCAFG00000031044	-	100	69.255	ENSCAFG00000006327	-	99	68.847
ENSCAFG00000031044	-	94	68.543	ENSCAFG00000003493	-	99	70.000
ENSCAFG00000031044	-	86	68.132	ENSCAFG00000019097	-	99	68.403
ENSCAFG00000031044	-	68	76.389	ENSCAFG00000030052	-	78	77.315
ENSCAFG00000031044	-	95	58.491	ENSCAFG00000006036	-	76	87.755
ENSCAFG00000031044	-	100	65.312	ENSCAFG00000006663	-	94	64.120
ENSCAFG00000031044	-	99	57.278	ENSCAFG00000017316	-	99	66.772
ENSCAFG00000031044	-	94	67.893	ENSCAFG00000017180	-	94	69.900
ENSCAFG00000031044	-	94	53.199	ENSCAFG00000013303	-	91	55.743
ENSCAFG00000031044	-	58	68.085	ENSCAFG00000006580	-	90	89.583
ENSCAFG00000031044	-	79	44.444	ENSCAFG00000006110	-	67	45.783
ENSCAFG00000031044	-	56	61.749	ENSCAFG00000013497	HNRNPA3	89	72.727
ENSCAFG00000031044	-	55	35.260	ENSCAFG00000019528	DAZAP1	67	35.260
ENSCAFG00000031044	-	54	44.571	ENSCAFG00000001132	HNRNPA0	98	41.311

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00000031044	-	94	50.831	ENSCSAG00000004770	-	93	50.166	Chlorocebus_sabaeus
ENSCAFG00000031044	-	66	74.419	ENSDNOG00000036385	-	90	77.083	Dasypus_novemcinctus
ENSCAFG00000031044	-	99	55.732	ENSETEG00000007429	-	99	55.414	Echinops_telfairi
ENSCAFG00000031044	-	96	85.484	ENSETEG00000013374	-	92	44.138	Echinops_telfairi
ENSCAFG00000031044	-	64	43.939	ENSETEG00000005266	-	97	44.670	Echinops_telfairi
ENSCAFG00000031044	-	93	44.595	ENSETEG00000010614	-	93	48.322	Echinops_telfairi
ENSCAFG00000031044	-	85	51.648	ENSELUG00000020089	-	88	52.577	Esox_lucius
ENSCAFG00000031044	-	80	51.181	ENSMPUG00000000096	-	74	53.968	Mustela_putorius_furo
ENSCAFG00000031044	-	87	77.586	ENSOARG00000010092	-	67	84.091	Ovis_aries
ENSCAFG00000031044	-	99	65.300	ENSPPRG00000018110	-	98	69.728	Panthera_pardus
ENSCAFG00000031044	-	100	62.857	ENSRNOG00000046286	AABR07055878.1	99	64.078	Rattus_norvegicus
ENSCAFG00000031044	-	100	62.857	ENSRNOG00000050603	AABR07055875.1	99	64.078	Rattus_norvegicus