EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCAFG00000031370 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Canis_familiaris
Status: putative
Strand: Minus strand
Length: 49877 bases
Position: chr7:78431694-78481570
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00000038012	RRM_1	PF00076.22	8.1e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00000048760	-	1736	-	ENSCAFP00000038012	165 (aa)	-	J9NXJ9

Gene Model

Click here to download ENSCAFG00000031370's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00000031370's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00000031370	-	75	82.258	ENSG00000077312	SNRPA	94	95.122	Homo_sapiens
ENSCAFG00000031370	-	52	91.860	ENSCJAG00000045570	-	92	91.860	Callithrix_jacchus
ENSCAFG00000031370	-	79	79.389	ENSCJAG00000014865	-	52	94.231	Callithrix_jacchus
ENSCAFG00000031370	-	52	94.186	ENSCAFG00020017913	-	90	94.186	Canis_lupus_dingo
ENSCAFG00000031370	-	63	94.231	ENSCAFG00020014898	SNRPA	87	91.765	Canis_lupus_dingo
ENSCAFG00000031370	-	50	98.795	ENSCAFG00020024265	-	67	98.795	Canis_lupus_dingo
ENSCAFG00000031370	-	50	66.265	ENSCAFG00020011358	-	94	66.265	Canis_lupus_dingo
ENSCAFG00000031370	-	79	80.000	ENSTSYG00000007632	SNRPA	53	94.231	Carlito_syrichta
ENSCAFG00000031370	-	57	69.149	ENSTSYG00000034767	-	51	69.149	Carlito_syrichta
ENSCAFG00000031370	-	57	68.085	ENSTSYG00000030443	-	52	68.085	Carlito_syrichta
ENSCAFG00000031370	-	57	69.149	ENSTSYG00000029747	-	51	69.149	Carlito_syrichta
ENSCAFG00000031370	-	63	94.231	ENSCATG00000032716	SNRPA	85	95.122	Cercocebus_atys
ENSCAFG00000031370	-	59	71.287	ENSCSAVG00000000396	-	50	67.925	Ciona_savignyi
ENSCAFG00000031370	-	63	94.231	ENSCANG00000038637	SNRPA	84	95.122	Colobus_angolensis_palliatus
ENSCAFG00000031370	-	76	52.000	ENSCGRG00001020641	-	53	58.654	Cricetulus_griseus_chok1gshd
ENSCAFG00000031370	-	76	52.000	ENSCGRG00000010980	-	53	58.654	Cricetulus_griseus_crigri
ENSCAFG00000031370	-	85	65.000	ENSLBEG00000021206	snrpa	51	76.991	Labrus_bergylta
ENSCAFG00000031370	-	63	94.231	ENSMFAG00000041710	SNRPA	85	95.122	Macaca_fascicularis
ENSCAFG00000031370	-	79	80.000	ENSMMUG00000022024	SNRPA	86	95.122	Macaca_mulatta
ENSCAFG00000031370	-	76	82.400	ENSMLEG00000039593	SNRPA	85	95.122	Mandrillus_leucophaeus
ENSCAFG00000031370	-	66	91.743	ENSMICG00000009766	SNRPA	52	93.269	Microcebus_murinus
ENSCAFG00000031370	-	58	70.833	MGP_CAROLIEiJ_G0024372	Snrpb2	68	70.103	Mus_caroli
ENSCAFG00000031370	-	58	70.833	ENSMUSG00000008333	Snrpb2	68	70.103	Mus_musculus
ENSCAFG00000031370	-	58	70.833	MGP_PahariEiJ_G0025817	Snrpb2	68	70.103	Mus_pahari
ENSCAFG00000031370	-	58	70.833	MGP_SPRETEiJ_G0025291	Snrpb2	68	70.103	Mus_spretus
ENSCAFG00000031370	-	50	93.902	ENSODEG00000000626	-	83	93.902	Octodon_degus
ENSCAFG00000031370	-	63	94.231	ENSPANG00000023874	SNRPA	85	95.122	Papio_anubis
ENSCAFG00000031370	-	79	69.466	ENSPMGG00000014087	snrpa	54	79.091	Periophthalmus_magnuspinnatus
ENSCAFG00000031370	-	58	77.083	ENSPMAG00000003771	SNRPA	54	73.529	Petromyzon_marinus
ENSCAFG00000031370	-	66	92.661	ENSPCOG00000025196	SNRPA	82	95.122	Propithecus_coquereli
ENSCAFG00000031370	-	57	71.277	ENSPNYG00000015510	snrpb2	50	54.472	Pundamilia_nyererei
ENSCAFG00000031370	-	82	75.556	ENSRBIG00000008335	SNRPA	84	95.122	Rhinopithecus_bieti
ENSCAFG00000031370	-	63	94.231	ENSRROG00000042727	SNRPA	84	95.122	Rhinopithecus_roxellana
ENSCAFG00000031370	-	58	31.579	YIR009W	MSL1	85	31.579	Saccharomyces_cerevisiae
ENSCAFG00000031370	-	79	79.389	ENSSBOG00000034722	SNRPA	59	95.122	Saimiri_boliviensis_boliviensis
ENSCAFG00000031370	-	75	58.400	ENSSFOG00015000856	SNRPB2	51	63.810	Scleropages_formosus
ENSCAFG00000031370	-	50	95.122	ENSUAMG00000003002	-	89	95.122	Ursus_americanus
ENSCAFG00000031370	-	51	58.333	ENSUMAG00000000069	-	82	50.000	Ursus_maritimus
ENSCAFG00000031370	-	63	94.231	ENSVVUG00000005647	SNRPA	87	91.765	Vulpes_vulpes
ENSCAFG00000031370	-	58	67.708	ENSVVUG00000025808	-	54	64.151	Vulpes_vulpes
ENSCAFG00000031370	-	50	93.976	ENSVVUG00000014183	-	74	93.976	Vulpes_vulpes
ENSCAFG00000031370	-	50	53.659	ENSXCOG00000012134	-	87	53.659	Xiphophorus_couchianus