EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAFG00000031888 (Gene tree)
Gene ID: 490042
Gene Symbol: ZNF200
Alias: -
Full Name: zinc finger protein 200
Gene Type: protein_coding
Species: Canis_familiaris
Status: putative
Strand: Plus strand
Length: 15922 bases
Position: chr6:37988373-38004294
Accession: 48672
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00000036277	zf-C2H2	PF00096.26	9.7e-23	1	3
ENSCAFP00000036277	zf-C2H2	PF00096.26	9.7e-23	2	3
ENSCAFP00000036277	zf-C2H2	PF00096.26	9.7e-23	3	3
ENSCAFP00000036277	zf-met	PF12874.7	1.7e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00000050075	-	4311	XM_005621639	ENSCAFP00000036277	403 (aa)	XP_005621696	J9NS02

Gene Model

Click here to download ENSCAFG00000031888's gene model file

Pathways

Pathway ID	Pathway Name	Source
cfa05168	Herpes simplex virus 1 infection	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00000031888's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAFG00000031888	ZNF200	68	46.957	ENSCAFG00000029340	-	99	46.957
ENSCAFG00000031888	ZNF200	67	47.445	ENSCAFG00000030057	ZNF234	99	47.445
ENSCAFG00000031888	ZNF200	67	48.529	ENSCAFG00000023007	-	79	48.529
ENSCAFG00000031888	ZNF200	72	42.718	ENSCAFG00000000017	ZNF236	60	42.718
ENSCAFG00000031888	ZNF200	68	50.000	ENSCAFG00000029288	-	99	50.000
ENSCAFG00000031888	ZNF200	67	46.721	ENSCAFG00000032123	-	99	46.721
ENSCAFG00000031888	ZNF200	93	44.526	ENSCAFG00000031471	-	96	44.526

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00000031888	ZNF200	100	100.000	ENSCAFG00020025815	ZNF200	100	100.000	Canis_lupus_dingo
ENSCAFG00000031888	ZNF200	59	84.519	ENSCHIG00000005451	-	71	84.519	Capra_hircus
ENSCAFG00000031888	ZNF200	97	73.214	ENSCCAG00000023518	ZNF200	99	73.214	Cebus_capucinus
ENSCAFG00000031888	ZNF200	97	80.253	ENSCHOG00000006590	ZNF200	99	80.253	Choloepus_hoffmanni
ENSCAFG00000031888	ZNF200	100	80.835	ENSDNOG00000042651	ZNF200	99	80.835	Dasypus_novemcinctus
ENSCAFG00000031888	ZNF200	100	84.483	ENSECAG00000007791	ZNF200	100	84.483	Equus_caballus
ENSCAFG00000031888	ZNF200	95	75.683	ENSHGLG00000007477	ZNF200	96	75.683	Heterocephalus_glaber_female
ENSCAFG00000031888	ZNF200	95	75.683	ENSHGLG00100003359	ZNF200	96	75.683	Heterocephalus_glaber_male
ENSCAFG00000031888	ZNF200	97	81.980	ENSMLEG00000038087	ZNF200	99	81.980	Mandrillus_leucophaeus
ENSCAFG00000031888	ZNF200	79	82.927	ENSPCAG00000015754	ZNF200	81	82.927	Procavia_capensis
ENSCAFG00000031888	ZNF200	97	82.234	ENSSBOG00000029594	ZNF200	99	82.234	Saimiri_boliviensis_boliviensis
ENSCAFG00000031888	ZNF200	97	85.063	ENSTTRG00000011655	ZNF200	99	85.063	Tursiops_truncatus
ENSCAFG00000031888	ZNF200	100	99.256	ENSVVUG00000008256	ZNF200	100	99.256	Vulpes_vulpes