EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCAFG00000032033 (Gene tree)
Gene ID: 482558
Gene Symbol: APEX1
Alias: -
Full Name: apurinic/apyrimidinic endodeoxyribonuclease 1
Gene Type: protein_coding
Species: Canis_familiaris
Status: putative
Strand: Plus strand
Length: 6071 bases
Position: chr15:17786744-17792814
Accession: 54195
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00000042629	Exo_endo_phos	PF03372.23	9.7e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00000048382	-	4772	-	ENSCAFP00000042629	318 (aa)	-	J9PA46

Gene Model

Click here to download ENSCAFG00000032033's gene model file

Pathways

Pathway ID	Pathway Name	Source
cfa03410	Base excision repair	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00000032033's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00000032033	APEX1	100	95.283	ENSG00000100823	APEX1	100	95.283	Homo_sapiens
ENSCAFG00000032033	APEX1	88	69.892	ENSAPOG00000017002	apex1	91	69.892	Acanthochromis_polyacanthus
ENSCAFG00000032033	APEX1	100	95.597	ENSAMEG00000005418	APEX1	100	95.597	Ailuropoda_melanoleuca
ENSCAFG00000032033	APEX1	87	71.223	ENSACIG00000010653	apex1	94	71.326	Amphilophus_citrinellus
ENSCAFG00000032033	APEX1	99	65.506	ENSAOCG00000009649	apex1	99	65.300	Amphiprion_ocellaris
ENSCAFG00000032033	APEX1	99	65.506	ENSAPEG00000021453	apex1	99	65.300	Amphiprion_percula
ENSCAFG00000032033	APEX1	99	68.038	ENSATEG00000002883	apex1	97	68.038	Anabas_testudineus
ENSCAFG00000032033	APEX1	100	70.186	ENSACAG00000008099	APEX1	100	70.186	Anolis_carolinensis
ENSCAFG00000032033	APEX1	100	95.912	ENSANAG00000030117	APEX1	100	95.912	Aotus_nancymaae
ENSCAFG00000032033	APEX1	86	71.636	ENSACLG00000018441	apex1	99	66.456	Astatotilapia_calliptera
ENSCAFG00000032033	APEX1	100	65.625	ENSAMXG00000034699	apex1	100	65.625	Astyanax_mexicanus
ENSCAFG00000032033	APEX1	100	93.396	ENSBTAG00000002745	APEX1	100	93.396	Bos_taurus
ENSCAFG00000032033	APEX1	80	44.922	WBGene00001372	exo-3	88	44.922	Caenorhabditis_elegans
ENSCAFG00000032033	APEX1	100	96.541	ENSCJAG00000009726	APEX1	100	96.541	Callithrix_jacchus
ENSCAFG00000032033	APEX1	54	100.000	ENSCAFG00020023002	-	96	100.000	Canis_lupus_dingo
ENSCAFG00000032033	APEX1	100	100.000	ENSCAFG00020014377	-	100	100.000	Canis_lupus_dingo
ENSCAFG00000032033	APEX1	100	93.396	ENSCHIG00000007298	-	100	93.396	Capra_hircus
ENSCAFG00000032033	APEX1	98	74.359	ENSCHIG00000014537	-	99	74.359	Capra_hircus
ENSCAFG00000032033	APEX1	100	93.711	ENSTSYG00000034813	APEX1	100	93.711	Carlito_syrichta
ENSCAFG00000032033	APEX1	85	88.930	ENSCAPG00000016235	APEX1	91	97.458	Cavia_aperea
ENSCAFG00000032033	APEX1	100	94.025	ENSCPOG00000030909	APEX1	100	94.025	Cavia_porcellus
ENSCAFG00000032033	APEX1	100	96.541	ENSCCAG00000033056	-	100	96.541	Cebus_capucinus
ENSCAFG00000032033	APEX1	100	83.019	ENSCCAG00000031931	-	100	83.019	Cebus_capucinus
ENSCAFG00000032033	APEX1	100	94.654	ENSCATG00000015580	APEX1	100	94.654	Cercocebus_atys
ENSCAFG00000032033	APEX1	100	94.025	ENSCLAG00000001002	APEX1	100	94.025	Chinchilla_lanigera
ENSCAFG00000032033	APEX1	100	94.340	ENSCSAG00000016670	-	100	94.340	Chlorocebus_sabaeus
ENSCAFG00000032033	APEX1	100	94.340	ENSCSAG00000016685	-	100	94.340	Chlorocebus_sabaeus
ENSCAFG00000032033	APEX1	100	70.846	ENSCPBG00000009567	APEX1	100	70.846	Chrysemys_picta_bellii
ENSCAFG00000032033	APEX1	93	53.465	ENSCING00000008137	-	83	58.779	Ciona_intestinalis
ENSCAFG00000032033	APEX1	98	47.604	ENSCSAVG00000007144	-	100	52.510	Ciona_savignyi
ENSCAFG00000032033	APEX1	100	94.969	ENSCANG00000030726	APEX1	100	94.969	Colobus_angolensis_palliatus
ENSCAFG00000032033	APEX1	100	91.824	ENSCGRG00001017046	Apex1	100	91.824	Cricetulus_griseus_chok1gshd
ENSCAFG00000032033	APEX1	100	91.824	ENSCGRG00000008984	Apex1	100	91.824	Cricetulus_griseus_crigri
ENSCAFG00000032033	APEX1	99	65.094	ENSCSEG00000017499	apex1	99	64.465	Cynoglossus_semilaevis
ENSCAFG00000032033	APEX1	88	71.685	ENSCVAG00000022075	apex1	99	66.456	Cyprinodon_variegatus
ENSCAFG00000032033	APEX1	100	66.667	ENSDARG00000045843	apex1	100	65.109	Danio_rerio
ENSCAFG00000032033	APEX1	100	89.308	ENSDNOG00000042234	APEX1	95	89.308	Dasypus_novemcinctus
ENSCAFG00000032033	APEX1	100	94.025	ENSDORG00000001616	Apex1	100	94.025	Dipodomys_ordii
ENSCAFG00000032033	APEX1	100	93.396	ENSETEG00000004855	-	100	93.396	Echinops_telfairi
ENSCAFG00000032033	APEX1	75	64.854	ENSEBUG00000000622	-	92	64.854	Eptatretus_burgeri
ENSCAFG00000032033	APEX1	100	96.226	ENSEASG00005017489	APEX1	74	96.226	Equus_asinus_asinus
ENSCAFG00000032033	APEX1	100	96.226	ENSECAG00000022325	APEX1	82	96.226	Equus_caballus
ENSCAFG00000032033	APEX1	91	93.750	ENSEEUG00000012569	APEX1	100	93.750	Erinaceus_europaeus
ENSCAFG00000032033	APEX1	100	65.723	ENSELUG00000021706	apex1	100	66.562	Esox_lucius
ENSCAFG00000032033	APEX1	100	95.912	ENSFCAG00000030869	APEX1	100	95.912	Felis_catus
ENSCAFG00000032033	APEX1	100	93.082	ENSFDAG00000006120	APEX1	100	93.082	Fukomys_damarensis
ENSCAFG00000032033	APEX1	99	67.722	ENSFHEG00000009031	apex1	83	67.722	Fundulus_heteroclitus
ENSCAFG00000032033	APEX1	99	62.975	ENSGMOG00000007943	apex1	99	62.975	Gadus_morhua
ENSCAFG00000032033	APEX1	88	72.401	ENSGAFG00000005311	apex1	99	67.405	Gambusia_affinis
ENSCAFG00000032033	APEX1	99	66.246	ENSGACG00000019497	apex1	99	69.549	Gasterosteus_aculeatus
ENSCAFG00000032033	APEX1	100	70.533	ENSGAGG00000014999	APEX1	100	70.533	Gopherus_agassizii
ENSCAFG00000032033	APEX1	100	95.283	ENSGGOG00000002128	APEX1	100	95.283	Gorilla_gorilla
ENSCAFG00000032033	APEX1	99	66.456	ENSHBUG00000005894	apex1	99	66.772	Haplochromis_burtoni
ENSCAFG00000032033	APEX1	100	94.025	ENSHGLG00000002848	APEX1	100	94.025	Heterocephalus_glaber_female
ENSCAFG00000032033	APEX1	100	94.025	ENSHGLG00100017878	APEX1	100	94.025	Heterocephalus_glaber_male
ENSCAFG00000032033	APEX1	99	66.771	ENSHCOG00000009961	apex1	99	67.089	Hippocampus_comes
ENSCAFG00000032033	APEX1	100	67.398	ENSIPUG00000005799	apex1	100	67.085	Ictalurus_punctatus
ENSCAFG00000032033	APEX1	100	94.025	ENSSTOG00000010096	APEX1	100	94.025	Ictidomys_tridecemlineatus
ENSCAFG00000032033	APEX1	100	93.082	ENSJJAG00000012067	-	100	93.082	Jaculus_jaculus
ENSCAFG00000032033	APEX1	100	83.648	ENSJJAG00000003660	-	100	83.648	Jaculus_jaculus
ENSCAFG00000032033	APEX1	94	84.899	ENSJJAG00000020465	-	96	84.899	Jaculus_jaculus
ENSCAFG00000032033	APEX1	99	66.139	ENSKMAG00000021171	apex1	99	66.139	Kryptolebias_marmoratus
ENSCAFG00000032033	APEX1	99	64.669	ENSLBEG00000010248	apex1	99	64.669	Labrus_bergylta
ENSCAFG00000032033	APEX1	100	67.188	ENSLACG00000008617	APEX1	100	65.938	Latimeria_chalumnae
ENSCAFG00000032033	APEX1	100	67.391	ENSLOCG00000015516	apex1	99	67.391	Lepisosteus_oculatus
ENSCAFG00000032033	APEX1	100	93.396	ENSLAFG00000021872	APEX1	100	93.396	Loxodonta_africana
ENSCAFG00000032033	APEX1	100	94.340	ENSMFAG00000002565	APEX1	100	94.340	Macaca_fascicularis
ENSCAFG00000032033	APEX1	100	94.340	ENSMMUG00000048039	APEX1	100	94.340	Macaca_mulatta
ENSCAFG00000032033	APEX1	100	94.340	ENSMNEG00000036944	APEX1	100	94.340	Macaca_nemestrina
ENSCAFG00000032033	APEX1	100	94.654	ENSMLEG00000042125	APEX1	100	94.654	Mandrillus_leucophaeus
ENSCAFG00000032033	APEX1	99	67.192	ENSMAMG00000023526	apex1	99	67.192	Mastacembelus_armatus
ENSCAFG00000032033	APEX1	86	71.636	ENSMZEG00005014187	apex1	99	66.456	Maylandia_zebra
ENSCAFG00000032033	APEX1	100	92.453	ENSMAUG00000013994	Apex1	100	92.453	Mesocricetus_auratus
ENSCAFG00000032033	APEX1	100	95.283	ENSMICG00000043554	APEX1	100	95.283	Microcebus_murinus
ENSCAFG00000032033	APEX1	100	93.082	ENSMOCG00000013721	Apex1	100	93.082	Microtus_ochrogaster
ENSCAFG00000032033	APEX1	99	63.950	ENSMMOG00000010031	apex1	97	63.009	Mola_mola
ENSCAFG00000032033	APEX1	100	84.062	ENSMODG00000007125	APEX1	100	83.642	Monodelphis_domestica
ENSCAFG00000032033	APEX1	88	64.158	ENSMALG00000011699	apex1	75	64.158	Monopterus_albus
ENSCAFG00000032033	APEX1	99	94.953	MGP_CAROLIEiJ_G0019209	Apex1	99	94.953	Mus_caroli
ENSCAFG00000032033	APEX1	100	95.597	ENSMUSG00000035960	Apex1	100	95.597	Mus_musculus
ENSCAFG00000032033	APEX1	100	95.597	MGP_PahariEiJ_G0030232	Apex1	100	95.597	Mus_pahari
ENSCAFG00000032033	APEX1	100	95.597	MGP_SPRETEiJ_G0020101	Apex1	100	95.597	Mus_spretus
ENSCAFG00000032033	APEX1	100	94.062	ENSMLUG00000028957	APEX1	100	94.062	Myotis_lucifugus
ENSCAFG00000032033	APEX1	100	70.440	ENSNGAG00000021748	-	99	70.440	Nannospalax_galili
ENSCAFG00000032033	APEX1	100	93.711	ENSNGAG00000002725	-	100	93.711	Nannospalax_galili
ENSCAFG00000032033	APEX1	86	71.273	ENSNBRG00000005334	apex1	91	66.139	Neolamprologus_brichardi
ENSCAFG00000032033	APEX1	100	94.969	ENSNLEG00000010839	APEX1	100	94.969	Nomascus_leucogenys
ENSCAFG00000032033	APEX1	100	86.478	ENSMEUG00000014519	APEX1	100	85.266	Notamacropus_eugenii
ENSCAFG00000032033	APEX1	100	93.396	ENSOPRG00000014029	APEX1	100	93.082	Ochotona_princeps
ENSCAFG00000032033	APEX1	100	94.340	ENSODEG00000001703	-	100	94.340	Octodon_degus
ENSCAFG00000032033	APEX1	97	75.405	ENSODEG00000004777	-	99	75.405	Octodon_degus
ENSCAFG00000032033	APEX1	100	70.988	ENSODEG00000006583	-	100	70.988	Octodon_degus
ENSCAFG00000032033	APEX1	87	71.583	ENSONIG00000012089	apex1	99	66.772	Oreochromis_niloticus
ENSCAFG00000032033	APEX1	90	82.807	ENSOANG00000008836	APEX1	80	79.012	Ornithorhynchus_anatinus
ENSCAFG00000032033	APEX1	100	95.283	ENSOCUG00000005022	APEX1	100	95.283	Oryctolagus_cuniculus
ENSCAFG00000032033	APEX1	99	67.925	ENSORLG00000012378	apex1	99	67.925	Oryzias_latipes
ENSCAFG00000032033	APEX1	99	67.925	ENSORLG00020021371	apex1	99	67.925	Oryzias_latipes_hni
ENSCAFG00000032033	APEX1	99	67.925	ENSORLG00015020089	apex1	99	67.925	Oryzias_latipes_hsok
ENSCAFG00000032033	APEX1	99	66.981	ENSOMEG00000018876	apex1	99	66.981	Oryzias_melastigma
ENSCAFG00000032033	APEX1	100	94.340	ENSOGAG00000013335	-	100	94.340	Otolemur_garnettii
ENSCAFG00000032033	APEX1	98	83.974	ENSOGAG00000029355	-	100	83.974	Otolemur_garnettii
ENSCAFG00000032033	APEX1	99	78.165	ENSOARG00000014424	-	100	78.165	Ovis_aries
ENSCAFG00000032033	APEX1	97	88.961	ENSOARG00000001876	-	100	88.961	Ovis_aries
ENSCAFG00000032033	APEX1	100	92.453	ENSOARG00000019740	-	100	92.453	Ovis_aries
ENSCAFG00000032033	APEX1	100	95.597	ENSPPAG00000038760	APEX1	100	95.597	Pan_paniscus
ENSCAFG00000032033	APEX1	100	96.226	ENSPPRG00000011794	APEX1	100	96.226	Panthera_pardus
ENSCAFG00000032033	APEX1	100	95.912	ENSPTIG00000014829	APEX1	100	95.912	Panthera_tigris_altaica
ENSCAFG00000032033	APEX1	100	95.597	ENSPTRG00000006093	APEX1	100	95.597	Pan_troglodytes
ENSCAFG00000032033	APEX1	100	94.654	ENSPANG00000022757	APEX1	100	94.654	Papio_anubis
ENSCAFG00000032033	APEX1	87	69.675	ENSPKIG00000003504	apex1	100	66.149	Paramormyrops_kingsleyae
ENSCAFG00000032033	APEX1	76	67.078	ENSPMGG00000016596	apex1	73	67.078	Periophthalmus_magnuspinnatus
ENSCAFG00000032033	APEX1	100	94.654	ENSPEMG00000019097	Apex1	100	94.654	Peromyscus_maniculatus_bairdii
ENSCAFG00000032033	APEX1	94	66.333	ENSPMAG00000007275	-	95	68.683	Petromyzon_marinus
ENSCAFG00000032033	APEX1	100	84.013	ENSPCIG00000023274	APEX1	100	84.639	Phascolarctos_cinereus
ENSCAFG00000032033	APEX1	88	72.760	ENSPFOG00000004178	apex1	99	67.405	Poecilia_formosa
ENSCAFG00000032033	APEX1	88	72.401	ENSPLAG00000012779	apex1	99	67.823	Poecilia_latipinna
ENSCAFG00000032033	APEX1	88	72.760	ENSPMEG00000019623	apex1	99	67.405	Poecilia_mexicana
ENSCAFG00000032033	APEX1	88	72.043	ENSPREG00000014298	apex1	99	66.772	Poecilia_reticulata
ENSCAFG00000032033	APEX1	100	94.654	ENSPPYG00000005565	APEX1	100	94.654	Pongo_abelii
ENSCAFG00000032033	APEX1	100	91.195	ENSPCAG00000010376	APEX1	100	91.195	Procavia_capensis
ENSCAFG00000032033	APEX1	100	95.283	ENSPCOG00000021564	APEX1	100	95.283	Propithecus_coquereli
ENSCAFG00000032033	APEX1	100	94.688	ENSPVAG00000010736	APEX1	100	94.688	Pteropus_vampyrus
ENSCAFG00000032033	APEX1	86	71.636	ENSPNYG00000023940	apex1	99	66.456	Pundamilia_nyererei
ENSCAFG00000032033	APEX1	93	65.203	ENSPNAG00000020897	apex1	96	65.085	Pygocentrus_nattereri
ENSCAFG00000032033	APEX1	100	94.654	ENSRNOG00000009663	Apex1	100	94.654	Rattus_norvegicus
ENSCAFG00000032033	APEX1	100	94.654	ENSRBIG00000038325	APEX1	99	94.654	Rhinopithecus_bieti
ENSCAFG00000032033	APEX1	100	96.226	ENSSBOG00000018921	-	100	96.226	Saimiri_boliviensis_boliviensis
ENSCAFG00000032033	APEX1	100	81.761	ENSSBOG00000031372	-	100	79.874	Saimiri_boliviensis_boliviensis
ENSCAFG00000032033	APEX1	100	83.025	ENSSHAG00000013524	APEX1	100	83.025	Sarcophilus_harrisii
ENSCAFG00000032033	APEX1	100	63.208	ENSSFOG00015001948	apex1	100	63.208	Scleropages_formosus
ENSCAFG00000032033	APEX1	87	69.424	ENSSMAG00000013348	apex1	99	64.873	Scophthalmus_maximus
ENSCAFG00000032033	APEX1	99	65.615	ENSSDUG00000016377	apex1	99	65.506	Seriola_dumerili
ENSCAFG00000032033	APEX1	99	66.246	ENSSLDG00000023005	apex1	99	66.139	Seriola_lalandi_dorsalis
ENSCAFG00000032033	APEX1	90	73.333	ENSSPUG00000000531	APEX1	95	73.239	Sphenodon_punctatus
ENSCAFG00000032033	APEX1	99	65.823	ENSSPAG00000000458	apex1	99	65.823	Stegastes_partitus
ENSCAFG00000032033	APEX1	93	59.603	ENSSSCG00000039705	-	92	60.211	Sus_scrofa
ENSCAFG00000032033	APEX1	100	95.283	ENSSSCG00000040060	-	100	95.283	Sus_scrofa
ENSCAFG00000032033	APEX1	74	60.593	ENSTGUG00000014378	APEX1	100	60.593	Taeniopygia_guttata
ENSCAFG00000032033	APEX1	87	67.626	ENSTRUG00000004268	apex1	95	63.608	Takifugu_rubripes
ENSCAFG00000032033	APEX1	99	64.241	ENSTNIG00000005778	apex1	99	63.608	Tetraodon_nigroviridis
ENSCAFG00000032033	APEX1	100	91.509	ENSTBEG00000006405	APEX1	100	91.509	Tupaia_belangeri
ENSCAFG00000032033	APEX1	74	95.763	ENSTTRG00000007860	APEX1	100	95.763	Tursiops_truncatus
ENSCAFG00000032033	APEX1	100	95.912	ENSUAMG00000010457	APEX1	100	95.912	Ursus_americanus
ENSCAFG00000032033	APEX1	100	95.912	ENSUMAG00000009178	APEX1	100	95.912	Ursus_maritimus
ENSCAFG00000032033	APEX1	74	91.102	ENSVPAG00000005083	APEX1	100	91.102	Vicugna_pacos
ENSCAFG00000032033	APEX1	100	99.371	ENSVVUG00000009010	APEX1	100	99.371	Vulpes_vulpes
ENSCAFG00000032033	APEX1	100	65.831	ENSXETG00000024773	apex1	100	65.831	Xenopus_tropicalis
ENSCAFG00000032033	APEX1	99	68.038	ENSXCOG00000015233	apex1	99	68.038	Xiphophorus_couchianus
ENSCAFG00000032033	APEX1	100	67.296	ENSXMAG00000006195	apex1	99	68.038	Xiphophorus_maculatus