EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSCAFG00020000481 (Gene tree)
Gene ID
112664161
Gene Symbol
CSDE1
Alias
D1S155E|UNR
Full Name
cold shock domain containing E1
Gene Type
protein_coding
Species
Canis_lupus_dingo
Status
putative
Strand
Plus strand
Length
30370 bases
Position
chrQKWQ01001382.1:11674633-11705002
Accession
29905
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCAFP00020000440CSDPF00313.225.7e-8515
ENSCAFP00020000440CSDPF00313.225.7e-8525
ENSCAFP00020000440CSDPF00313.225.7e-8535
ENSCAFP00020000440CSDPF00313.225.7e-8545
ENSCAFP00020000440CSDPF00313.225.7e-8555
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCAFT00020000535CSDE1-2012692-ENSCAFP00020000440767 (aa)-UPI00005A33EC
Gene Model
Click here to download ENSCAFG00020000481's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00020000481's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCAFG00020000481CSDE110099.348ENSG00000009307CSDE1100100.000Homo_sapiens
ENSCAFG00020000481CSDE110077.922ENSAPOG00000015538csde110077.922Acanthochromis_polyacanthus
ENSCAFG00020000481CSDE110098.566ENSAMEG00000017129CSDE19498.566Ailuropoda_melanoleuca
ENSCAFG00020000481CSDE19077.027ENSACIG00000015175csde110077.027Amphilophus_citrinellus
ENSCAFG00020000481CSDE110078.052ENSAOCG00000011510csde110078.052Amphiprion_ocellaris
ENSCAFG00020000481CSDE110078.052ENSAPEG00000007194csde110078.052Amphiprion_percula
ENSCAFG00020000481CSDE110077.662ENSATEG00000003864csde110077.662Anabas_testudineus
ENSCAFG00020000481CSDE110092.047ENSAPLG00000008797CSDE110092.047Anas_platyrhynchos
ENSCAFG00020000481CSDE110088.095ENSACAG00000003120CSDE110088.095Anolis_carolinensis
ENSCAFG00020000481CSDE19373.050ENSANAG00000028396-9073.050Aotus_nancymaae
ENSCAFG00020000481CSDE110099.087ENSANAG00000024665CSDE19599.087Aotus_nancymaae
ENSCAFG00020000481CSDE110077.633ENSACLG00000013296csde110077.633Astatotilapia_calliptera
ENSCAFG00020000481CSDE110077.302ENSAMXG00000007436csde110077.302Astyanax_mexicanus
ENSCAFG00020000481CSDE110098.696ENSBTAG00000000678CSDE110098.696Bos_taurus
ENSCAFG00020000481CSDE110099.087ENSCJAG00000012565CSDE19499.087Callithrix_jacchus
ENSCAFG00020000481CSDE198100.000ENSCAFG00000009618CSDE194100.000Canis_familiaris
ENSCAFG00020000481CSDE110098.696ENSCHIG00000017250CSDE110098.696Capra_hircus
ENSCAFG00020000481CSDE110098.435ENSTSYG00000003747CSDE110098.435Carlito_syrichta
ENSCAFG00020000481CSDE110068.342ENSCAPG00000015128CSDE110068.342Cavia_aperea
ENSCAFG00020000481CSDE110092.269ENSCPOG00000040388CSDE110092.269Cavia_porcellus
ENSCAFG00020000481CSDE110099.087ENSCCAG00000036794CSDE110098.886Cebus_capucinus
ENSCAFG00020000481CSDE19577.228ENSCCAG00000033677-9976.722Cebus_capucinus
ENSCAFG00020000481CSDE19674.165ENSCCAG00000030878-9174.165Cebus_capucinus
ENSCAFG00020000481CSDE110099.348ENSCATG00000036962CSDE19899.525Cercocebus_atys
ENSCAFG00020000481CSDE110098.827ENSCLAG00000006618CSDE110098.827Chinchilla_lanigera
ENSCAFG00020000481CSDE110095.489ENSCSAG00000001658CSDE19595.489Chlorocebus_sabaeus
ENSCAFG00020000481CSDE110091.342ENSCHOG00000000918CSDE18991.342Choloepus_hoffmanni
ENSCAFG00020000481CSDE110092.177ENSCPBG00000016547CSDE110092.177Chrysemys_picta_bellii
ENSCAFG00020000481CSDE19742.189ENSCING00000014465-9642.189Ciona_intestinalis
ENSCAFG00020000481CSDE19642.092ENSCSAVG00000008100-9842.092Ciona_savignyi
ENSCAFG00020000481CSDE19993.419ENSCANG00000031069-10093.419Colobus_angolensis_palliatus
ENSCAFG00020000481CSDE110099.348ENSCANG00000035096CSDE19899.525Colobus_angolensis_palliatus
ENSCAFG00020000481CSDE110098.435ENSCGRG00001016833-10098.435Cricetulus_griseus_chok1gshd
ENSCAFG00020000481CSDE110081.226ENSCGRG00001014011-10081.226Cricetulus_griseus_chok1gshd
ENSCAFG00020000481CSDE110084.783ENSCGRG00000005831-10084.783Cricetulus_griseus_crigri
ENSCAFG00020000481CSDE19698.218ENSCGRG00000002225-10098.218Cricetulus_griseus_crigri
ENSCAFG00020000481CSDE110077.503ENSCSEG00000002620csde110077.503Cynoglossus_semilaevis
ENSCAFG00020000481CSDE110077.013ENSCVAG00000001344csde110077.013Cyprinodon_variegatus
ENSCAFG00020000481CSDE110075.344ENSDARG00000074758csde110075.344Danio_rerio
ENSCAFG00020000481CSDE110098.568ENSDNOG00000010287-9398.568Dasypus_novemcinctus
ENSCAFG00020000481CSDE18070.342ENSDNOG00000034464-10070.342Dasypus_novemcinctus
ENSCAFG00020000481CSDE19998.054ENSDORG00000011609Csde110098.054Dipodomys_ordii
ENSCAFG00020000481CSDE19747.951FBgn0263352Unr7447.581Drosophila_melanogaster
ENSCAFG00020000481CSDE17968.377ENSETEG00000007109-9968.377Echinops_telfairi
ENSCAFG00020000481CSDE19087.184ENSETEG00000006280-10087.184Echinops_telfairi
ENSCAFG00020000481CSDE19977.023ENSETEG00000013678-9977.023Echinops_telfairi
ENSCAFG00020000481CSDE19398.519ENSETEG00000002491-7498.519Echinops_telfairi
ENSCAFG00020000481CSDE19954.310ENSEBUG00000008647csde19952.625Eptatretus_burgeri
ENSCAFG00020000481CSDE110099.218ENSEASG00005006284CSDE110095.363Equus_asinus_asinus
ENSCAFG00020000481CSDE110099.218ENSECAG00000020885CSDE19999.157Equus_caballus
ENSCAFG00020000481CSDE19299.476ENSEEUG00000006286CSDE16899.476Erinaceus_europaeus
ENSCAFG00020000481CSDE110076.197ENSELUG00000015507csde110076.197Esox_lucius
ENSCAFG00020000481CSDE110099.739ENSFCAG00000029266CSDE110099.739Felis_catus
ENSCAFG00020000481CSDE110087.970ENSFALG00000003407CSDE110087.970Ficedula_albicollis
ENSCAFG00020000481CSDE19998.952ENSFDAG00000007882CSDE110098.952Fukomys_damarensis
ENSCAFG00020000481CSDE19877.454ENSFHEG00000010799csde19977.454Fundulus_heteroclitus
ENSCAFG00020000481CSDE19974.529ENSGMOG00000012731csde110074.529Gadus_morhua
ENSCAFG00020000481CSDE19888.363ENSGALG00000002139CSDE19888.363Gallus_gallus
ENSCAFG00020000481CSDE19276.677ENSGAFG00000005241csde19576.677Gambusia_affinis
ENSCAFG00020000481CSDE19975.313ENSGACG00000004544csde110075.313Gasterosteus_aculeatus
ENSCAFG00020000481CSDE110091.786ENSGAGG00000017685CSDE110088.221Gopherus_agassizii
ENSCAFG00020000481CSDE110099.348ENSGGOG00000002164CSDE110099.348Gorilla_gorilla
ENSCAFG00020000481CSDE110077.633ENSHBUG00000020315csde110077.633Haplochromis_burtoni
ENSCAFG00020000481CSDE110089.048ENSHGLG00000009620-10089.309Heterocephalus_glaber_female
ENSCAFG00020000481CSDE110089.179ENSHGLG00000003829-10089.179Heterocephalus_glaber_female
ENSCAFG00020000481CSDE19989.222ENSHGLG00000008555-10089.222Heterocephalus_glaber_female
ENSCAFG00020000481CSDE110080.177ENSHGLG00000019549-10080.177Heterocephalus_glaber_female
ENSCAFG00020000481CSDE19985.283ENSHGLG00000007471-9885.283Heterocephalus_glaber_female
ENSCAFG00020000481CSDE19689.755ENSHGLG00000010039-10089.755Heterocephalus_glaber_female
ENSCAFG00020000481CSDE19976.286ENSHGLG00000000650-9976.286Heterocephalus_glaber_female
ENSCAFG00020000481CSDE110080.208ENSHGLG00100001846-10080.208Heterocephalus_glaber_male
ENSCAFG00020000481CSDE19689.532ENSHGLG00100006910-10089.532Heterocephalus_glaber_male
ENSCAFG00020000481CSDE19980.726ENSHGLG00100002245-9980.726Heterocephalus_glaber_male
ENSCAFG00020000481CSDE19383.961ENSHGLG00100004195-10083.961Heterocephalus_glaber_male
ENSCAFG00020000481CSDE110084.485ENSHGLG00100012072-10084.485Heterocephalus_glaber_male
ENSCAFG00020000481CSDE19982.654ENSHGLG00100007287-9882.654Heterocephalus_glaber_male
ENSCAFG00020000481CSDE19681.960ENSHGLG00100004833-10081.960Heterocephalus_glaber_male
ENSCAFG00020000481CSDE110099.087ENSHGLG00100019438-10099.087Heterocephalus_glaber_male
ENSCAFG00020000481CSDE110076.593ENSHCOG00000004158csde110076.593Hippocampus_comes
ENSCAFG00020000481CSDE110077.043ENSIPUG00000000355csde110077.043Ictalurus_punctatus
ENSCAFG00020000481CSDE19281.290ENSSTOG00000032722-9881.290Ictidomys_tridecemlineatus
ENSCAFG00020000481CSDE110080.307ENSSTOG00000030994-10080.307Ictidomys_tridecemlineatus
ENSCAFG00020000481CSDE19998.503ENSJJAG00000019571Csde110098.503Jaculus_jaculus
ENSCAFG00020000481CSDE110074.471ENSKMAG00000005685csde110074.102Kryptolebias_marmoratus
ENSCAFG00020000481CSDE110077.792ENSLBEG00000014770csde110077.792Labrus_bergylta
ENSCAFG00020000481CSDE110076.303ENSLACG00000018452CSDE19476.303Latimeria_chalumnae
ENSCAFG00020000481CSDE110077.792ENSLOCG00000010413csde19477.792Lepisosteus_oculatus
ENSCAFG00020000481CSDE110097.914ENSLAFG00000007150CSDE19697.914Loxodonta_africana
ENSCAFG00020000481CSDE110099.348ENSMFAG00000003674CSDE110099.348Macaca_fascicularis
ENSCAFG00020000481CSDE110099.348ENSMMUG00000001974CSDE110099.348Macaca_mulatta
ENSCAFG00020000481CSDE110099.348ENSMNEG00000045247CSDE19899.525Macaca_nemestrina
ENSCAFG00020000481CSDE110099.087ENSMLEG00000038673CSDE19499.087Mandrillus_leucophaeus
ENSCAFG00020000481CSDE110078.571ENSMAMG00000008821csde110078.571Mastacembelus_armatus
ENSCAFG00020000481CSDE110077.633ENSMZEG00005021675csde110077.633Maylandia_zebra
ENSCAFG00020000481CSDE110091.797ENSMGAG00000016381CSDE110091.797Meleagris_gallopavo
ENSCAFG00020000481CSDE19998.503ENSMAUG00000014031Csde110098.503Mesocricetus_auratus
ENSCAFG00020000481CSDE110098.435ENSMICG00000002050CSDE19998.661Microcebus_murinus
ENSCAFG00020000481CSDE110098.435ENSMOCG00000018960Csde110098.435Microtus_ochrogaster
ENSCAFG00020000481CSDE110077.922ENSMMOG00000015075csde110077.922Mola_mola
ENSCAFG00020000481CSDE110095.059ENSMODG00000004685CSDE110092.105Monodelphis_domestica
ENSCAFG00020000481CSDE110078.052ENSMALG00000007132csde110078.052Monopterus_albus
ENSCAFG00020000481CSDE110098.175MGP_CAROLIEiJ_G0025444Csde110098.175Mus_caroli
ENSCAFG00020000481CSDE110098.305ENSMUSG00000068823Csde110098.353Mus_musculus
ENSCAFG00020000481CSDE110098.566MGP_PahariEiJ_G0026888Csde110098.566Mus_pahari
ENSCAFG00020000481CSDE110098.566MGP_SPRETEiJ_G0026394Csde110098.566Mus_spretus
ENSCAFG00020000481CSDE19895.785ENSMPUG00000005753CSDE19995.785Mustela_putorius_furo
ENSCAFG00020000481CSDE110098.175ENSMLUG00000005681CSDE19498.175Myotis_lucifugus
ENSCAFG00020000481CSDE19671.269ENSNGAG00000012599-10071.269Nannospalax_galili
ENSCAFG00020000481CSDE19998.653ENSNGAG00000021929Csde110098.653Nannospalax_galili
ENSCAFG00020000481CSDE110077.633ENSNBRG00000020808csde110077.633Neolamprologus_brichardi
ENSCAFG00020000481CSDE110099.218ENSNLEG00000004842CSDE19799.218Nomascus_leucogenys
ENSCAFG00020000481CSDE19891.489ENSMEUG00000002677CSDE110091.489Notamacropus_eugenii
ENSCAFG00020000481CSDE19894.048ENSOPRG00000005002CSDE18294.048Ochotona_princeps
ENSCAFG00020000481CSDE19998.653ENSODEG00000007383-10098.653Octodon_degus
ENSCAFG00020000481CSDE19667.478ENSODEG00000005979-9867.478Octodon_degus
ENSCAFG00020000481CSDE110073.072ENSONIG00000009309csde110073.072Oreochromis_niloticus
ENSCAFG00020000481CSDE110075.935ENSOANG00000003346-10075.935Ornithorhynchus_anatinus
ENSCAFG00020000481CSDE110098.566ENSOCUG00000016438CSDE19498.566Oryctolagus_cuniculus
ENSCAFG00020000481CSDE110077.763ENSORLG00000000707csde110077.763Oryzias_latipes
ENSCAFG00020000481CSDE110074.812ENSORLG00020005148csde110073.072Oryzias_latipes_hni
ENSCAFG00020000481CSDE110077.763ENSORLG00015019415csde110077.763Oryzias_latipes_hsok
ENSCAFG00020000481CSDE110078.442ENSOMEG00000015656csde110078.442Oryzias_melastigma
ENSCAFG00020000481CSDE110099.218ENSOGAG00000012127CSDE19499.218Otolemur_garnettii
ENSCAFG00020000481CSDE110098.827ENSOARG00000020034CSDE19498.827Ovis_aries
ENSCAFG00020000481CSDE110099.348ENSPPAG00000025861CSDE110099.348Pan_paniscus
ENSCAFG00020000481CSDE110099.739ENSPPRG00000006747CSDE19499.739Panthera_pardus
ENSCAFG00020000481CSDE110099.739ENSPTIG00000015468CSDE110095.865Panthera_tigris_altaica
ENSCAFG00020000481CSDE110099.348ENSPTRG00000033721CSDE19799.348Pan_troglodytes
ENSCAFG00020000481CSDE110099.348ENSPANG00000018873CSDE110099.348Papio_anubis
ENSCAFG00020000481CSDE110077.373ENSPKIG00000009459csde110077.373Paramormyrops_kingsleyae
ENSCAFG00020000481CSDE19688.717ENSPSIG00000003823CSDE19688.717Pelodiscus_sinensis
ENSCAFG00020000481CSDE110077.532ENSPMGG00000000772csde110077.532Periophthalmus_magnuspinnatus
ENSCAFG00020000481CSDE19998.503ENSPEMG00000020357-10098.503Peromyscus_maniculatus_bairdii
ENSCAFG00020000481CSDE110092.231ENSPCIG00000022587CSDE110092.231Phascolarctos_cinereus
ENSCAFG00020000481CSDE19975.311ENSPFOG00000012664csde110075.776Poecilia_formosa
ENSCAFG00020000481CSDE19771.275ENSPLAG00000017680csde19371.275Poecilia_latipinna
ENSCAFG00020000481CSDE19871.320ENSPMEG00000005094csde19671.320Poecilia_mexicana
ENSCAFG00020000481CSDE110073.724ENSPREG00000011631csde110071.566Poecilia_reticulata
ENSCAFG00020000481CSDE110095.363ENSPPYG00000000996CSDE110095.363Pongo_abelii
ENSCAFG00020000481CSDE110094.263ENSPCAG00000014368CSDE19494.263Procavia_capensis
ENSCAFG00020000481CSDE19082.482ENSPCOG00000008223-9282.482Propithecus_coquereli
ENSCAFG00020000481CSDE110099.087ENSPCOG00000017893CSDE110099.087Propithecus_coquereli
ENSCAFG00020000481CSDE110092.960ENSPVAG00000008225CSDE19592.960Pteropus_vampyrus
ENSCAFG00020000481CSDE110077.633ENSPNYG00000013745csde110077.633Pundamilia_nyererei
ENSCAFG00020000481CSDE110077.792ENSPNAG00000001958csde110077.792Pygocentrus_nattereri
ENSCAFG00020000481CSDE110094.612ENSRNOG00000061058Csde110094.612Rattus_norvegicus
ENSCAFG00020000481CSDE110093.628ENSRBIG00000038966-9493.628Rhinopithecus_bieti
ENSCAFG00020000481CSDE110095.573ENSRBIG00000038088-9997.696Rhinopithecus_bieti
ENSCAFG00020000481CSDE110099.348ENSRROG00000043101CSDE19899.289Rhinopithecus_roxellana
ENSCAFG00020000481CSDE110099.087ENSSBOG00000035592CSDE19599.087Saimiri_boliviensis_boliviensis
ENSCAFG00020000481CSDE110095.828ENSSHAG00000009831CSDE110095.828Sarcophilus_harrisii
ENSCAFG00020000481CSDE110077.113ENSSFOG00015007498csde110077.113Scleropages_formosus
ENSCAFG00020000481CSDE110078.442ENSSMAG00000007203csde110078.442Scophthalmus_maximus
ENSCAFG00020000481CSDE110077.922ENSSDUG00000015380csde110077.922Seriola_dumerili
ENSCAFG00020000481CSDE110077.922ENSSLDG00000008819csde110077.922Seriola_lalandi_dorsalis
ENSCAFG00020000481CSDE110097.784ENSSARG00000000738CSDE19497.784Sorex_araneus
ENSCAFG00020000481CSDE110091.525ENSSPUG00000008714CSDE110091.525Sphenodon_punctatus
ENSCAFG00020000481CSDE110077.792ENSSPAG00000000716csde110077.792Stegastes_partitus
ENSCAFG00020000481CSDE110099.218ENSSSCG00000006752CSDE110099.218Sus_scrofa
ENSCAFG00020000481CSDE110087.000ENSTGUG00000000972CSDE110087.000Taeniopygia_guttata
ENSCAFG00020000481CSDE110074.772ENSTRUG00000007996csde110074.772Takifugu_rubripes
ENSCAFG00020000481CSDE19373.180ENSTNIG00000010878csde110073.180Tetraodon_nigroviridis
ENSCAFG00020000481CSDE19299.387ENSTBEG00000011880-6299.387Tupaia_belangeri
ENSCAFG00020000481CSDE110098.566ENSTTRG00000015583CSDE19498.566Tursiops_truncatus
ENSCAFG00020000481CSDE18999.357ENSUAMG00000021779-10099.357Ursus_americanus
ENSCAFG00020000481CSDE18995.008ENSUAMG00000024289-9995.008Ursus_americanus
ENSCAFG00020000481CSDE110091.917ENSUMAG00000009720-9791.917Ursus_maritimus
ENSCAFG00020000481CSDE18699.525ENSUMAG00000011714-9999.525Ursus_maritimus
ENSCAFG00020000481CSDE110098.592ENSVPAG00000000749CSDE17998.592Vicugna_pacos
ENSCAFG00020000481CSDE19395.468ENSVVUG00000009890CSDE19495.468Vulpes_vulpes
ENSCAFG00020000481CSDE110082.272ENSXETG00000021448csde110082.272Xenopus_tropicalis
ENSCAFG00020000481CSDE19285.455ENSXCOG00000000035csde18585.455Xiphophorus_couchianus
ENSCAFG00020000481CSDE19877.984ENSXMAG00000009080csde19877.984Xiphophorus_maculatus

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