EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAFG00020000852 (Gene tree)
Gene ID: 112657626
Gene Symbol: -
Alias: -
Full Name: SRA stem-loop interacting RNA binding protein
Gene Type: protein_coding
Species: Canis_lupus_dingo
Status: putative
Strand: Minus strand
Length: 7854 bases
Position: chrQKWQ01001014.1:23543004-23550857
Accession: 112657626
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00020000861	RRM_1	PF00076.22	5.8e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00020001037	-	336	-	ENSCAFP00020000861	111 (aa)	XP_025299444	UPI00005A195F

Gene Model

Click here to download ENSCAFG00020000852's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00020000852's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAFG00020000852	-	100	92.793	ENSCAFG00020015876	-	90	94.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00020000852	-	92	77.451	ENSBTAG00000050457	-	98	78.000	Bos_taurus
ENSCAFG00020000852	-	100	86.486	ENSBTAG00000008135	SLIRP	90	85.000	Bos_taurus
ENSCAFG00020000852	-	100	100.000	ENSCAFG00000017230	SLIRP	100	100.000	Canis_familiaris
ENSCAFG00020000852	-	100	86.486	ENSCHIG00000019077	-	93	86.000	Capra_hircus
ENSCAFG00020000852	-	100	76.577	ENSCHIG00000002964	-	90	77.000	Capra_hircus
ENSCAFG00020000852	-	100	77.477	ENSCPOG00000001500	-	90	77.000	Cavia_porcellus
ENSCAFG00020000852	-	100	72.973	ENSCLAG00000008545	-	90	72.000	Chinchilla_lanigera
ENSCAFG00020000852	-	78	63.218	ENSDNOG00000041397	-	79	63.218	Dasypus_novemcinctus
ENSCAFG00020000852	-	100	86.486	ENSECAG00000000712	SLIRP	90	86.000	Equus_caballus
ENSCAFG00020000852	-	89	80.808	ENSJJAG00000018723	-	100	78.378	Jaculus_jaculus
ENSCAFG00020000852	-	100	78.378	MGP_PahariEiJ_G0029754	-	90	80.000	Mus_pahari
ENSCAFG00020000852	-	90	80.000	ENSMLUG00000022403	-	100	79.279	Myotis_lucifugus
ENSCAFG00020000852	-	98	77.982	ENSOPRG00000007560	-	88	79.592	Ochotona_princeps
ENSCAFG00020000852	-	100	84.685	ENSOCUG00000009713	-	90	86.000	Oryctolagus_cuniculus
ENSCAFG00020000852	-	90	69.000	ENSOGAG00000027580	-	89	69.000	Otolemur_garnettii
ENSCAFG00020000852	-	100	71.171	ENSOARG00000016139	-	85	74.737	Ovis_aries
ENSCAFG00020000852	-	100	85.586	ENSOARG00000002642	SLIRP	90	85.000	Ovis_aries
ENSCAFG00020000852	-	86	62.500	ENSPCAG00000004290	-	89	61.616	Procavia_capensis
ENSCAFG00020000852	-	68	80.263	ENSPVAG00000006420	-	68	80.263	Pteropus_vampyrus
ENSCAFG00020000852	-	100	78.378	ENSRNOG00000012314	Slirp	90	80.000	Rattus_norvegicus
ENSCAFG00020000852	-	100	81.982	ENSTBEG00000013979	-	90	83.000	Tupaia_belangeri
ENSCAFG00020000852	-	70	82.051	ENSTTRG00000009328	-	90	68.000	Tursiops_truncatus