EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAFG00020001279 (Gene tree)
Gene ID: 112651883
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Canis_lupus_dingo
Status: putative
Strand: Minus strand
Length: 11218 bases
Position: chrQKWQ01001345.1:13156-24373
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00020001455	MMR_HSR1	PF01926.23	4.7e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00020001713	-	1581	-	ENSCAFP00020001455	526 (aa)	-	-

Gene Model

Click here to download ENSCAFG00020001279's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00020001279's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAFG00020001279	-	100	99.620	ENSCAFG00020010766	-	100	99.620

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00020001279	-	99	74.053	ENSG00000178605	GTPBP6	99	72.571	Homo_sapiens
ENSCAFG00020001279	-	80	62.559	ENSAPOG00000001396	gtpbp6	79	62.559	Acanthochromis_polyacanthus
ENSCAFG00020001279	-	89	86.624	ENSAMEG00000001958	GTPBP6	96	87.527	Ailuropoda_melanoleuca
ENSCAFG00020001279	-	73	60.260	ENSACIG00000001694	gtpbp6	72	60.260	Amphilophus_citrinellus
ENSCAFG00020001279	-	80	61.611	ENSAOCG00000014817	gtpbp6	79	61.611	Amphiprion_ocellaris
ENSCAFG00020001279	-	80	61.611	ENSAPEG00000017894	gtpbp6	79	61.611	Amphiprion_percula
ENSCAFG00020001279	-	80	59.716	ENSATEG00000012768	gtpbp6	79	59.716	Anabas_testudineus
ENSCAFG00020001279	-	77	65.509	ENSAPLG00000005592	GTPBP6	99	65.509	Anas_platyrhynchos
ENSCAFG00020001279	-	96	60.000	ENSACAG00000011834	GTPBP6	82	65.187	Anolis_carolinensis
ENSCAFG00020001279	-	88	57.296	ENSACLG00000002216	gtpbp6	79	60.476	Astatotilapia_calliptera
ENSCAFG00020001279	-	86	57.489	ENSAMXG00000012493	gtpbp6	85	59.762	Astyanax_mexicanus
ENSCAFG00020001279	-	99	74.144	ENSBTAG00000054315	GTPBP6	99	74.525	Bos_taurus
ENSCAFG00020001279	-	67	79.603	ENSCJAG00000013056	GTPBP6	99	79.603	Callithrix_jacchus
ENSCAFG00020001279	-	100	99.810	ENSCAFG00000010931	GTPBP6	100	99.810	Canis_familiaris
ENSCAFG00020001279	-	99	73.714	ENSCHIG00000000121	GTPBP6	99	75.475	Capra_hircus
ENSCAFG00020001279	-	99	73.674	ENSCCAG00000032874	GTPBP6	84	79.677	Cebus_capucinus
ENSCAFG00020001279	-	99	72.538	ENSCATG00000024945	GTPBP6	99	71.619	Cercocebus_atys
ENSCAFG00020001279	-	61	84.615	ENSCLAG00000000054	-	100	84.615	Chinchilla_lanigera
ENSCAFG00020001279	-	81	66.197	ENSCPBG00000007520	GTPBP6	82	66.197	Chrysemys_picta_bellii
ENSCAFG00020001279	-	82	38.889	ENSCING00000012867	-	73	39.842	Ciona_intestinalis
ENSCAFG00020001279	-	73	36.471	ENSCSAVG00000009232	-	97	35.782	Ciona_savignyi
ENSCAFG00020001279	-	99	61.932	ENSCGRG00001022411	Gtpbp6	85	70.183	Cricetulus_griseus_chok1gshd
ENSCAFG00020001279	-	78	70.702	ENSCGRG00000007715	Gtpbp6	95	70.702	Cricetulus_griseus_crigri
ENSCAFG00020001279	-	87	54.741	ENSCSEG00000007271	gtpbp6	83	57.210	Cynoglossus_semilaevis
ENSCAFG00020001279	-	80	61.611	ENSCVAG00000015417	gtpbp6	82	61.611	Cyprinodon_variegatus
ENSCAFG00020001279	-	86	57.709	ENSDARG00000061091	gtpbp6	77	60.476	Danio_rerio
ENSCAFG00020001279	-	83	57.303	ENSDNOG00000039508	GTPBP6	77	62.242	Dasypus_novemcinctus
ENSCAFG00020001279	-	80	40.319	FBgn0039339	CG5116	81	40.319	Drosophila_melanogaster
ENSCAFG00020001279	-	87	48.268	ENSEBUG00000000404	gtpbp6	78	48.961	Eptatretus_burgeri
ENSCAFG00020001279	-	92	80.769	ENSEASG00005007092	-	68	80.769	Equus_asinus_asinus
ENSCAFG00020001279	-	99	77.203	ENSECAG00000032734	GTPBP6	99	75.763	Equus_caballus
ENSCAFG00020001279	-	78	60.584	ENSELUG00000016376	gtpbp6	74	60.636	Esox_lucius
ENSCAFG00020001279	-	99	72.659	ENSFCAG00000013263	-	100	72.590	Felis_catus
ENSCAFG00020001279	-	99	72.519	ENSFCAG00000010310	-	98	83.740	Felis_catus
ENSCAFG00020001279	-	80	64.539	ENSFALG00000004133	GTPBP6	91	64.055	Ficedula_albicollis
ENSCAFG00020001279	-	98	54.721	ENSFHEG00000012018	gtpbp6	81	61.374	Fundulus_heteroclitus
ENSCAFG00020001279	-	76	61.845	ENSGMOG00000004778	gtpbp6	99	61.845	Gadus_morhua
ENSCAFG00020001279	-	75	65.491	ENSGALG00000016717	GTPBP6	99	65.491	Gallus_gallus
ENSCAFG00020001279	-	80	61.374	ENSGAFG00000018158	gtpbp6	74	61.374	Gambusia_affinis
ENSCAFG00020001279	-	76	61.596	ENSGACG00000013857	gtpbp6	99	61.596	Gasterosteus_aculeatus
ENSCAFG00020001279	-	80	66.903	ENSGAGG00000021606	GTPBP6	81	66.903	Gopherus_agassizii
ENSCAFG00020001279	-	52	79.927	ENSGGOG00000002792	-	96	79.927	Gorilla_gorilla
ENSCAFG00020001279	-	89	57.388	ENSHBUG00000013113	gtpbp6	79	60.427	Haplochromis_burtoni
ENSCAFG00020001279	-	83	75.346	ENSHGLG00000000207	GTPBP6	85	75.346	Heterocephalus_glaber_female
ENSCAFG00020001279	-	68	74.095	ENSHGLG00100000320	GTPBP6	100	74.095	Heterocephalus_glaber_male
ENSCAFG00020001279	-	81	46.353	ENSHCOG00000012544	gtpbp6	91	59.298	Hippocampus_comes
ENSCAFG00020001279	-	80	60.476	ENSIPUG00000022531	gtpbp6	77	60.476	Ictalurus_punctatus
ENSCAFG00020001279	-	89	57.296	ENSKMAG00000016464	gtpbp6	81	60.190	Kryptolebias_marmoratus
ENSCAFG00020001279	-	80	59.479	ENSLBEG00000024203	gtpbp6	80	59.479	Labrus_bergylta
ENSCAFG00020001279	-	84	63.864	ENSLACG00000012754	GTPBP6	78	64.802	Latimeria_chalumnae
ENSCAFG00020001279	-	88	57.660	ENSLOCG00000008009	gtpbp6	88	61.611	Lepisosteus_oculatus
ENSCAFG00020001279	-	99	73.485	ENSMFAG00000041568	GTPBP6	99	72.381	Macaca_fascicularis
ENSCAFG00020001279	-	99	62.500	ENSMNEG00000039609	GTPBP6	99	61.333	Macaca_nemestrina
ENSCAFG00020001279	-	80	60.427	ENSMAMG00000012631	gtpbp6	80	60.427	Mastacembelus_armatus
ENSCAFG00020001279	-	88	57.296	ENSMZEG00005002869	gtpbp6	79	60.476	Maylandia_zebra
ENSCAFG00020001279	-	72	63.874	ENSMGAG00000014752	GTPBP6	95	63.874	Meleagris_gallopavo
ENSCAFG00020001279	-	95	55.050	ENSMMOG00000005950	gtpbp6	81	59.716	Mola_mola
ENSCAFG00020001279	-	80	69.267	ENSMODG00000000326	GTPBP6	92	69.284	Monodelphis_domestica
ENSCAFG00020001279	-	80	59.479	ENSMALG00000014993	gtpbp6	79	59.479	Monopterus_albus
ENSCAFG00020001279	-	80	66.033	MGP_CAROLIEiJ_G0027536	Gtpbp6	84	66.051	Mus_caroli
ENSCAFG00020001279	-	80	67.062	ENSMUSG00000033434	Gtpbp6	84	67.206	Mus_musculus
ENSCAFG00020001279	-	80	66.588	MGP_SPRETEiJ_G0028534	Gtpbp6	84	66.744	Mus_spretus
ENSCAFG00020001279	-	76	90.274	ENSMPUG00000001536	GTPBP6	86	90.274	Mustela_putorius_furo
ENSCAFG00020001279	-	100	63.774	ENSNGAG00000011609	Gtpbp6	85	69.425	Nannospalax_galili
ENSCAFG00020001279	-	88	57.235	ENSNBRG00000017629	gtpbp6	79	60.427	Neolamprologus_brichardi
ENSCAFG00020001279	-	73	61.893	ENSMEUG00000001355	-	100	62.176	Notamacropus_eugenii
ENSCAFG00020001279	-	99	66.920	ENSODEG00000001052	GTPBP6	100	65.589	Octodon_degus
ENSCAFG00020001279	-	89	57.602	ENSONIG00000007330	gtpbp6	80	60.664	Oreochromis_niloticus
ENSCAFG00020001279	-	85	59.649	ENSOANG00000007007	-	96	59.864	Ornithorhynchus_anatinus
ENSCAFG00020001279	-	100	69.011	ENSOCUG00000008245	GTPBP6	100	69.260	Oryctolagus_cuniculus
ENSCAFG00020001279	-	85	58.186	ENSORLG00000016077	gtpbp6	81	60.714	Oryzias_latipes
ENSCAFG00020001279	-	85	58.186	ENSORLG00020018687	gtpbp6	80	60.714	Oryzias_latipes_hni
ENSCAFG00020001279	-	96	53.385	ENSORLG00015014255	gtpbp6	80	60.000	Oryzias_latipes_hsok
ENSCAFG00020001279	-	87	58.531	ENSOMEG00000004496	gtpbp6	80	61.905	Oryzias_melastigma
ENSCAFG00020001279	-	82	76.905	ENSOGAG00000011327	GTPBP6	97	77.136	Otolemur_garnettii
ENSCAFG00020001279	-	76	75.369	ENSOARG00000000946	GTPBP6	98	75.430	Ovis_aries
ENSCAFG00020001279	-	69	79.282	ENSPPAG00000028400	-	80	79.282	Pan_paniscus
ENSCAFG00020001279	-	100	65.348	ENSPPRG00000006710	-	99	65.348	Panthera_pardus
ENSCAFG00020001279	-	98	72.147	ENSPPRG00000004932	-	85	76.212	Panthera_pardus
ENSCAFG00020001279	-	99	73.864	ENSPTRG00000050696	GTPBP6	99	72.571	Pan_troglodytes
ENSCAFG00020001279	-	99	70.833	ENSPANG00000011580	GTPBP6	99	70.095	Papio_anubis
ENSCAFG00020001279	-	85	59.956	ENSPKIG00000022514	gtpbp6	75	62.381	Paramormyrops_kingsleyae
ENSCAFG00020001279	-	77	67.990	ENSPSIG00000013117	GTPBP6	100	67.990	Pelodiscus_sinensis
ENSCAFG00020001279	-	76	50.376	ENSPMAG00000006496	gtpbp6	99	50.376	Petromyzon_marinus
ENSCAFG00020001279	-	99	63.118	ENSPCIG00000016456	GTPBP6	84	68.360	Phascolarctos_cinereus
ENSCAFG00020001279	-	80	61.611	ENSPFOG00000015695	gtpbp6	99	62.532	Poecilia_formosa
ENSCAFG00020001279	-	80	61.374	ENSPLAG00000015495	gtpbp6	81	61.374	Poecilia_latipinna
ENSCAFG00020001279	-	80	61.374	ENSPMEG00000000859	gtpbp6	81	61.374	Poecilia_mexicana
ENSCAFG00020001279	-	80	62.322	ENSPREG00000017643	gtpbp6	81	62.322	Poecilia_reticulata
ENSCAFG00020001279	-	52	79.927	ENSPPYG00000020075	-	99	79.927	Pongo_abelii
ENSCAFG00020001279	-	64	83.810	ENSPCOG00000014096	GTPBP6	76	83.810	Propithecus_coquereli
ENSCAFG00020001279	-	91	56.341	ENSPNYG00000000521	gtpbp6	78	60.427	Pundamilia_nyererei
ENSCAFG00020001279	-	89	55.957	ENSPNAG00000002094	gtpbp6	76	59.286	Pygocentrus_nattereri
ENSCAFG00020001279	-	81	64.720	ENSRNOG00000048168	Gtpbp6	87	64.270	Rattus_norvegicus
ENSCAFG00020001279	-	81	64.720	ENSRNOG00000037426	Gtpbp6	87	64.270	Rattus_norvegicus
ENSCAFG00020001279	-	99	73.485	ENSRBIG00000027538	GTPBP6	99	72.190	Rhinopithecus_bieti
ENSCAFG00020001279	-	99	73.485	ENSRROG00000033503	GTPBP6	99	72.190	Rhinopithecus_roxellana
ENSCAFG00020001279	-	99	63.039	ENSSHAG00000015570	GTPBP6	99	63.068	Sarcophilus_harrisii
ENSCAFG00020001279	-	85	60.802	ENSSFOG00015004098	gtpbp6	75	63.333	Scleropages_formosus
ENSCAFG00020001279	-	80	61.848	ENSSMAG00000019520	gtpbp6	79	61.848	Scophthalmus_maximus
ENSCAFG00020001279	-	84	57.978	ENSSDUG00000002202	gtpbp6	78	59.953	Seriola_dumerili
ENSCAFG00020001279	-	88	56.926	ENSSLDG00000023633	gtpbp6	88	59.479	Seriola_lalandi_dorsalis
ENSCAFG00020001279	-	97	59.725	ENSSPUG00000005537	GTPBP6	83	64.941	Sphenodon_punctatus
ENSCAFG00020001279	-	55	61.458	ENSSPAG00000017331	gtpbp6	96	61.458	Stegastes_partitus
ENSCAFG00020001279	-	81	60.613	ENSSPAG00000017406	gtpbp6	79	60.613	Stegastes_partitus
ENSCAFG00020001279	-	100	78.178	ENSSSCG00000033858	-	100	77.989	Sus_scrofa
ENSCAFG00020001279	-	100	78.178	ENSSSCG00000037491	-	100	77.989	Sus_scrofa
ENSCAFG00020001279	-	83	63.616	ENSTGUG00000010642	-	97	63.532	Taeniopygia_guttata
ENSCAFG00020001279	-	89	56.290	ENSTRUG00000011175	gtpbp6	82	59.479	Takifugu_rubripes
ENSCAFG00020001279	-	80	59.857	ENSTNIG00000010659	gtpbp6	98	59.857	Tetraodon_nigroviridis
ENSCAFG00020001279	-	77	90.594	ENSUMAG00000018848	GTPBP6	99	90.594	Ursus_maritimus
ENSCAFG00020001279	-	91	97.941	ENSVVUG00000008199	GTPBP6	85	97.941	Vulpes_vulpes
ENSCAFG00020001279	-	80	63.981	ENSXETG00000004125	gtpbp6	80	63.981	Xenopus_tropicalis
ENSCAFG00020001279	-	54	64.311	ENSXCOG00000006281	gtpbp6	57	64.311	Xiphophorus_couchianus
ENSCAFG00020001279	-	80	61.374	ENSXMAG00000015980	gtpbp6	81	61.374	Xiphophorus_maculatus