EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCAFG00020001387 (Gene tree)
Gene ID: 112668780
Gene Symbol: TRANK1
Alias: KIAA0342|LBA1
Full Name: tetratricopeptide repeat and ankyrin repeat containing 1
Gene Type: protein_coding
Species: Canis_lupus_dingo
Status: putative
Strand: Plus strand
Length: 79819 bases
Position: chrQKWQ01001964.1:13758903-13838721
Accession: 29011
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00020001690	UvrD-helicase	PF00580.21	2.5e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00020001985	TRANK1-203	8694	-	ENSCAFP00020001696	2897 (aa)	-	-
ENSCAFT00020001979	TRANK1-202	4968	-	ENSCAFP00020001690	1655 (aa)	-	-
ENSCAFT00020001972	TRANK1-201	8916	-	ENSCAFP00020001683	2971 (aa)	-	-

Gene Model

Click here to download ENSCAFG00020001387's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00020001387's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00020001387	TRANK1	96	83.833	ENSTSYG00000025860	TRANK1	54	83.582	Carlito_syrichta
ENSCAFG00020001387	TRANK1	96	79.086	ENSCLAG00000003643	TRANK1	53	79.737	Chinchilla_lanigera
ENSCAFG00020001387	TRANK1	99	64.485	ENSCPBG00000013529	TRANK1	57	64.346	Chrysemys_picta_bellii
ENSCAFG00020001387	TRANK1	97	85.866	ENSCANG00000039915	TRANK1	54	86.366	Colobus_angolensis_palliatus
ENSCAFG00020001387	TRANK1	99	81.752	ENSDNOG00000003573	TRANK1	56	81.813	Dasypus_novemcinctus
ENSCAFG00020001387	TRANK1	100	85.275	ENSEASG00005007374	TRANK1	100	85.516	Equus_asinus_asinus
ENSCAFG00020001387	TRANK1	99	85.471	ENSECAG00000018264	TRANK1	55	85.714	Equus_caballus
ENSCAFG00020001387	TRANK1	99	58.449	ENSFALG00000002875	TRANK1	54	58.449	Ficedula_albicollis
ENSCAFG00020001387	TRANK1	99	60.304	ENSGALG00000037629	TRANK1	85	59.818	Gallus_gallus
ENSCAFG00020001387	TRANK1	81	65.683	ENSGAGG00000009012	TRANK1	50	65.291	Gopherus_agassizii
ENSCAFG00020001387	TRANK1	99	51.928	ENSLOCG00000004808	TRANK1	55	51.749	Lepisosteus_oculatus
ENSCAFG00020001387	TRANK1	96	60.088	ENSMGAG00000011934	TRANK1	54	60.088	Meleagris_gallopavo
ENSCAFG00020001387	TRANK1	97	85.009	ENSMLUG00000003537	TRANK1	55	84.947	Myotis_lucifugus
ENSCAFG00020001387	TRANK1	96	78.460	ENSODEG00000003882	TRANK1	52	79.112	Octodon_degus
ENSCAFG00020001387	TRANK1	99	62.470	ENSPSIG00000010217	TRANK1	55	62.470	Pelodiscus_sinensis
ENSCAFG00020001387	TRANK1	99	86.306	ENSRBIG00000012281	TRANK1	54	86.554	Rhinopithecus_bieti
ENSCAFG00020001387	TRANK1	97	86.116	ENSRROG00000044487	TRANK1	54	86.617	Rhinopithecus_roxellana
ENSCAFG00020001387	TRANK1	99	93.280	ENSUAMG00000027609	-	99	93.280	Ursus_americanus
ENSCAFG00020001387	TRANK1	99	91.998	ENSUMAG00000006416	TRANK1	99	91.998	Ursus_maritimus
ENSCAFG00020001387	TRANK1	100	97.885	ENSVVUG00000007788	TRANK1	100	97.885	Vulpes_vulpes