EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAFG00020002052 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Canis_lupus_dingo
Status: putative
Strand: Minus strand
Length: 5461 bases
Position: chrQKWQ01002442.1:89537-94997
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00020002425	RRM_1	PF00076.22	6.6e-43	1	2
ENSCAFP00020002425	RRM_1	PF00076.22	6.6e-43	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00020002811	-	630	-	ENSCAFP00020002425	209 (aa)	-	-

Gene Model

Click here to download ENSCAFG00020002052's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00020002052's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAFG00020002052	-	97	60.891	ENSCAFG00020019182	-	53	60.891
ENSCAFG00020002052	-	63	30.534	ENSCAFG00020026232	-	86	30.534
ENSCAFG00020002052	-	99	74.757	ENSCAFG00020004161	PABPC4	57	74.757
ENSCAFG00020002052	-	72	32.895	ENSCAFG00020004614	ELAVL3	89	33.113
ENSCAFG00020002052	-	75	33.333	ENSCAFG00020013891	TIAL1	73	33.333
ENSCAFG00020002052	-	72	33.553	ENSCAFG00020013581	ELAVL4	60	33.553
ENSCAFG00020002052	-	99	70.388	ENSCAFG00020013828	PABPC1L	62	70.388
ENSCAFG00020002052	-	85	32.704	ENSCAFG00020022841	-	96	32.704
ENSCAFG00020002052	-	98	79.024	ENSCAFG00020000440	PABPC1	59	79.024
ENSCAFG00020002052	-	92	30.808	ENSCAFG00020001832	TIA1	68	30.808

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00020002052	-	96	99.500	ENSG00000186288	PABPC1L2A	100	99.500	Homo_sapiens
ENSCAFG00020002052	-	96	99.500	ENSG00000184388	PABPC1L2B	100	99.500	Homo_sapiens
ENSCAFG00020002052	-	98	79.024	ENSAPOG00000015105	pabpc1a	59	79.024	Acanthochromis_polyacanthus
ENSCAFG00020002052	-	98	78.537	ENSAPOG00000017776	pabpc1b	61	78.537	Acanthochromis_polyacanthus
ENSCAFG00020002052	-	96	100.000	ENSAMEG00000019441	-	100	100.000	Ailuropoda_melanoleuca
ENSCAFG00020002052	-	98	79.024	ENSACIG00000004685	pabpc1a	59	79.024	Amphilophus_citrinellus
ENSCAFG00020002052	-	98	77.561	ENSACIG00000018366	pabpc1b	60	77.561	Amphilophus_citrinellus
ENSCAFG00020002052	-	98	79.024	ENSAOCG00000019839	pabpc1b	59	79.024	Amphiprion_ocellaris
ENSCAFG00020002052	-	98	79.024	ENSAOCG00000011656	pabpc1a	59	79.024	Amphiprion_ocellaris
ENSCAFG00020002052	-	98	79.024	ENSAPEG00000010435	pabpc1b	59	79.024	Amphiprion_percula
ENSCAFG00020002052	-	98	79.024	ENSAPEG00000006963	pabpc1a	59	79.024	Amphiprion_percula
ENSCAFG00020002052	-	98	78.049	ENSATEG00000012917	pabpc1b	59	78.049	Anabas_testudineus
ENSCAFG00020002052	-	98	79.024	ENSATEG00000024852	pabpc1a	59	79.024	Anabas_testudineus
ENSCAFG00020002052	-	96	99.500	ENSANAG00000019429	-	100	99.500	Aotus_nancymaae
ENSCAFG00020002052	-	96	99.500	ENSANAG00000019431	-	100	99.500	Aotus_nancymaae
ENSCAFG00020002052	-	98	79.024	ENSACLG00000009399	pabpc1a	68	78.889	Astatotilapia_calliptera
ENSCAFG00020002052	-	98	77.073	ENSACLG00000014335	pabpc1b	59	77.073	Astatotilapia_calliptera
ENSCAFG00020002052	-	98	78.537	ENSAMXG00000008599	pabpc1b	59	78.537	Astyanax_mexicanus
ENSCAFG00020002052	-	99	98.086	ENSBTAG00000050902	-	99	98.086	Bos_taurus
ENSCAFG00020002052	-	100	96.244	ENSBTAG00000052491	-	100	96.244	Bos_taurus
ENSCAFG00020002052	-	96	99.500	ENSCJAG00000041326	-	100	99.500	Callithrix_jacchus
ENSCAFG00020002052	-	96	99.500	ENSCHIG00000006283	-	100	99.500	Capra_hircus
ENSCAFG00020002052	-	96	100.000	ENSCHIG00000011138	-	100	100.000	Capra_hircus
ENSCAFG00020002052	-	96	100.000	ENSTSYG00000001775	-	100	100.000	Carlito_syrichta
ENSCAFG00020002052	-	96	99.500	ENSCPOG00000009525	-	100	99.500	Cavia_porcellus
ENSCAFG00020002052	-	96	99.500	ENSCCAG00000031524	-	100	99.500	Cebus_capucinus
ENSCAFG00020002052	-	96	99.500	ENSCATG00000042826	-	100	99.500	Cercocebus_atys
ENSCAFG00020002052	-	96	99.500	ENSCATG00000043125	-	100	99.500	Cercocebus_atys
ENSCAFG00020002052	-	96	96.000	ENSCLAG00000017409	-	100	96.000	Chinchilla_lanigera
ENSCAFG00020002052	-	96	96.000	ENSCLAG00000017412	-	100	96.000	Chinchilla_lanigera
ENSCAFG00020002052	-	96	99.500	ENSCSAG00000000102	-	100	99.500	Chlorocebus_sabaeus
ENSCAFG00020002052	-	95	92.965	ENSCGRG00001023387	-	98	92.965	Cricetulus_griseus_chok1gshd
ENSCAFG00020002052	-	98	79.024	ENSCSEG00000013324	pabpc1a	59	79.024	Cynoglossus_semilaevis
ENSCAFG00020002052	-	98	78.049	ENSCSEG00000015241	-	59	78.049	Cynoglossus_semilaevis
ENSCAFG00020002052	-	98	78.537	ENSCVAG00000005489	pabpc1b	59	78.537	Cyprinodon_variegatus
ENSCAFG00020002052	-	98	79.024	ENSCVAG00000021872	pabpc1a	59	79.024	Cyprinodon_variegatus
ENSCAFG00020002052	-	98	78.049	ENSDARG00000021140	pabpc1b	99	80.142	Danio_rerio
ENSCAFG00020002052	-	98	78.537	ENSDARG00000017219	pabpc1a	59	78.537	Danio_rerio
ENSCAFG00020002052	-	96	97.500	ENSDNOG00000030926	-	100	97.500	Dasypus_novemcinctus
ENSCAFG00020002052	-	96	97.000	ENSDORG00000011362	-	100	97.000	Dipodomys_ordii
ENSCAFG00020002052	-	100	98.095	ENSEASG00005010399	-	100	98.095	Equus_asinus_asinus
ENSCAFG00020002052	-	100	98.095	ENSECAG00000002620	-	100	98.095	Equus_caballus
ENSCAFG00020002052	-	96	95.000	ENSEEUG00000008203	-	100	95.000	Erinaceus_europaeus
ENSCAFG00020002052	-	98	78.537	ENSELUG00000003614	pabpc1a	60	78.537	Esox_lucius
ENSCAFG00020002052	-	98	79.024	ENSELUG00000015062	-	60	79.024	Esox_lucius
ENSCAFG00020002052	-	94	54.822	ENSELUG00000005389	-	82	54.822	Esox_lucius
ENSCAFG00020002052	-	96	100.000	ENSFCAG00000039701	-	100	100.000	Felis_catus
ENSCAFG00020002052	-	96	99.500	ENSFDAG00000005484	-	100	99.500	Fukomys_damarensis
ENSCAFG00020002052	-	98	79.024	ENSFHEG00000018979	pabpc1a	59	79.024	Fundulus_heteroclitus
ENSCAFG00020002052	-	98	78.049	ENSFHEG00000008186	pabpc1b	59	78.049	Fundulus_heteroclitus
ENSCAFG00020002052	-	98	78.537	ENSGMOG00000002448	-	59	78.537	Gadus_morhua
ENSCAFG00020002052	-	98	78.537	ENSGMOG00000013448	pabpc1a	58	78.537	Gadus_morhua
ENSCAFG00020002052	-	98	78.537	ENSGAFG00000010193	pabpc1b	62	78.537	Gambusia_affinis
ENSCAFG00020002052	-	98	79.024	ENSGAFG00000019750	pabpc1a	63	79.024	Gambusia_affinis
ENSCAFG00020002052	-	98	79.024	ENSGACG00000003572	pabpc1a	59	79.024	Gasterosteus_aculeatus
ENSCAFG00020002052	-	98	79.512	ENSGACG00000003771	pabpc1b	66	79.512	Gasterosteus_aculeatus
ENSCAFG00020002052	-	96	99.500	ENSGGOG00000038606	-	100	99.500	Gorilla_gorilla
ENSCAFG00020002052	-	96	99.500	ENSGGOG00000043933	-	100	99.500	Gorilla_gorilla
ENSCAFG00020002052	-	98	79.024	ENSHBUG00000020487	pabpc1a	68	78.889	Haplochromis_burtoni
ENSCAFG00020002052	-	98	77.073	ENSHBUG00000002075	pabpc1b	62	77.073	Haplochromis_burtoni
ENSCAFG00020002052	-	96	97.500	ENSHGLG00000019668	-	100	97.500	Heterocephalus_glaber_female
ENSCAFG00020002052	-	96	97.500	ENSHGLG00000019762	-	100	97.500	Heterocephalus_glaber_female
ENSCAFG00020002052	-	96	97.500	ENSHGLG00100020854	-	100	97.500	Heterocephalus_glaber_male
ENSCAFG00020002052	-	90	68.783	ENSHCOG00000003175	pabpc1b	69	67.500	Hippocampus_comes
ENSCAFG00020002052	-	98	79.024	ENSHCOG00000013502	pabpc1a	59	79.024	Hippocampus_comes
ENSCAFG00020002052	-	98	78.537	ENSIPUG00000008848	pabpc1a	61	78.537	Ictalurus_punctatus
ENSCAFG00020002052	-	96	59.799	ENSIPUG00000021244	-	53	59.799	Ictalurus_punctatus
ENSCAFG00020002052	-	98	78.537	ENSIPUG00000010791	-	63	78.537	Ictalurus_punctatus
ENSCAFG00020002052	-	96	99.000	ENSSTOG00000026028	-	100	99.000	Ictidomys_tridecemlineatus
ENSCAFG00020002052	-	96	99.000	ENSSTOG00000022096	-	100	99.000	Ictidomys_tridecemlineatus
ENSCAFG00020002052	-	96	97.500	ENSJJAG00000007037	-	100	97.500	Jaculus_jaculus
ENSCAFG00020002052	-	98	78.049	ENSKMAG00000008049	pabpc1b	64	78.049	Kryptolebias_marmoratus
ENSCAFG00020002052	-	98	79.024	ENSKMAG00000000605	pabpc1a	59	79.024	Kryptolebias_marmoratus
ENSCAFG00020002052	-	98	79.024	ENSLBEG00000024002	-	59	79.024	Labrus_bergylta
ENSCAFG00020002052	-	98	79.024	ENSLBEG00000026845	pabpc1b	59	79.024	Labrus_bergylta
ENSCAFG00020002052	-	95	97.487	ENSLAFG00000023096	-	99	97.487	Loxodonta_africana
ENSCAFG00020002052	-	96	99.005	ENSMFAG00000028878	-	100	99.005	Macaca_fascicularis
ENSCAFG00020002052	-	96	99.500	ENSMMUG00000037681	-	100	99.500	Macaca_mulatta
ENSCAFG00020002052	-	96	99.500	ENSMMUG00000039929	-	100	99.500	Macaca_mulatta
ENSCAFG00020002052	-	96	99.500	ENSMMUG00000009740	-	100	99.500	Macaca_mulatta
ENSCAFG00020002052	-	96	99.500	ENSMNEG00000037732	-	100	99.500	Macaca_nemestrina
ENSCAFG00020002052	-	96	99.500	ENSMLEG00000027495	-	100	99.500	Mandrillus_leucophaeus
ENSCAFG00020002052	-	98	79.024	ENSMAMG00000004502	-	68	78.889	Mastacembelus_armatus
ENSCAFG00020002052	-	98	78.049	ENSMAMG00000014610	pabpc1b	61	78.049	Mastacembelus_armatus
ENSCAFG00020002052	-	98	77.073	ENSMZEG00005026745	pabpc1b	59	77.073	Maylandia_zebra
ENSCAFG00020002052	-	98	79.024	ENSMZEG00005025416	pabpc1a	68	78.889	Maylandia_zebra
ENSCAFG00020002052	-	96	99.500	ENSMICG00000047642	-	100	99.500	Microcebus_murinus
ENSCAFG00020002052	-	98	79.024	ENSMMOG00000018044	pabpc1a	68	78.889	Mola_mola
ENSCAFG00020002052	-	98	79.024	ENSMMOG00000018009	pabpc1b	63	79.024	Mola_mola
ENSCAFG00020002052	-	95	73.737	ENSMODG00000013156	-	58	73.737	Monodelphis_domestica
ENSCAFG00020002052	-	97	65.842	ENSMODG00000015024	-	58	65.842	Monodelphis_domestica
ENSCAFG00020002052	-	98	78.049	ENSMALG00000006066	pabpc1b	64	78.049	Monopterus_albus
ENSCAFG00020002052	-	98	79.024	ENSMALG00000013020	-	64	79.024	Monopterus_albus
ENSCAFG00020002052	-	96	97.000	ENSNGAG00000012688	-	100	97.000	Nannospalax_galili
ENSCAFG00020002052	-	98	79.024	ENSNBRG00000003068	-	68	78.889	Neolamprologus_brichardi
ENSCAFG00020002052	-	98	77.073	ENSNBRG00000013737	pabpc1b	63	77.073	Neolamprologus_brichardi
ENSCAFG00020002052	-	96	99.500	ENSNLEG00000018128	-	100	99.500	Nomascus_leucogenys
ENSCAFG00020002052	-	96	97.000	ENSODEG00000018540	-	100	97.000	Octodon_degus
ENSCAFG00020002052	-	98	77.073	ENSONIG00000002717	pabpc1b	59	77.073	Oreochromis_niloticus
ENSCAFG00020002052	-	98	79.024	ENSONIG00000006871	-	59	79.024	Oreochromis_niloticus
ENSCAFG00020002052	-	96	100.000	ENSOCUG00000002565	-	100	100.000	Oryctolagus_cuniculus
ENSCAFG00020002052	-	98	79.024	ENSORLG00000002691	pabpc1a	68	78.889	Oryzias_latipes
ENSCAFG00020002052	-	98	76.098	ENSORLG00000003008	-	60	76.098	Oryzias_latipes
ENSCAFG00020002052	-	98	76.098	ENSORLG00020022259	-	60	76.098	Oryzias_latipes_hni
ENSCAFG00020002052	-	98	79.024	ENSORLG00020022398	pabpc1a	59	79.024	Oryzias_latipes_hni
ENSCAFG00020002052	-	98	79.024	ENSORLG00015013633	pabpc1	59	79.024	Oryzias_latipes_hsok
ENSCAFG00020002052	-	98	76.098	ENSORLG00015010932	-	60	76.098	Oryzias_latipes_hsok
ENSCAFG00020002052	-	98	79.024	ENSOMEG00000020219	pabpc1a	59	79.024	Oryzias_melastigma
ENSCAFG00020002052	-	94	76.667	ENSOMEG00000013627	pabpc1b	67	76.667	Oryzias_melastigma
ENSCAFG00020002052	-	96	99.500	ENSOGAG00000026047	-	100	99.500	Otolemur_garnettii
ENSCAFG00020002052	-	96	99.500	ENSOGAG00000029513	-	100	99.500	Otolemur_garnettii
ENSCAFG00020002052	-	96	99.500	ENSOARG00000005943	-	100	99.500	Ovis_aries
ENSCAFG00020002052	-	96	99.500	ENSPPAG00000012920	-	100	99.500	Pan_paniscus
ENSCAFG00020002052	-	96	100.000	ENSPPRG00000011804	-	100	100.000	Panthera_pardus
ENSCAFG00020002052	-	96	100.000	ENSPPRG00000011809	-	100	100.000	Panthera_pardus
ENSCAFG00020002052	-	96	99.500	ENSPTRG00000028252	-	100	99.500	Pan_troglodytes
ENSCAFG00020002052	-	96	99.500	ENSPANG00000011549	-	100	99.500	Papio_anubis
ENSCAFG00020002052	-	98	78.537	ENSPKIG00000005676	pabpc1b	59	78.537	Paramormyrops_kingsleyae
ENSCAFG00020002052	-	98	78.537	ENSPMGG00000023134	-	81	78.537	Periophthalmus_magnuspinnatus
ENSCAFG00020002052	-	98	78.049	ENSPMGG00000022487	pabpc1a	77	78.049	Periophthalmus_magnuspinnatus
ENSCAFG00020002052	-	98	78.049	ENSPFOG00000005917	pabpc1b	59	78.049	Poecilia_formosa
ENSCAFG00020002052	-	98	79.024	ENSPFOG00000010815	pabpc1a	58	79.024	Poecilia_formosa
ENSCAFG00020002052	-	98	79.024	ENSPLAG00000004114	pabpc1a	59	79.024	Poecilia_latipinna
ENSCAFG00020002052	-	98	78.537	ENSPLAG00000001388	pabpc1b	59	78.537	Poecilia_latipinna
ENSCAFG00020002052	-	98	78.049	ENSPMEG00000014399	pabpc1b	62	75.122	Poecilia_mexicana
ENSCAFG00020002052	-	98	79.024	ENSPMEG00000001334	pabpc1a	59	79.024	Poecilia_mexicana
ENSCAFG00020002052	-	98	79.024	ENSPREG00000019595	pabpc1a	92	85.385	Poecilia_reticulata
ENSCAFG00020002052	-	98	78.537	ENSPREG00000010911	pabpc1b	62	78.537	Poecilia_reticulata
ENSCAFG00020002052	-	96	99.500	ENSPPYG00000020468	-	100	99.500	Pongo_abelii
ENSCAFG00020002052	-	96	99.000	ENSPCAG00000005308	-	100	99.000	Procavia_capensis
ENSCAFG00020002052	-	96	99.000	ENSPCOG00000026349	-	100	99.000	Propithecus_coquereli
ENSCAFG00020002052	-	96	96.000	ENSPVAG00000016117	-	100	96.000	Pteropus_vampyrus
ENSCAFG00020002052	-	98	77.073	ENSPNYG00000012578	pabpc1b	62	77.073	Pundamilia_nyererei
ENSCAFG00020002052	-	98	79.024	ENSPNYG00000005192	pabpc1a	61	78.889	Pundamilia_nyererei
ENSCAFG00020002052	-	98	79.024	ENSPNAG00000024626	pabpc1b	59	79.024	Pygocentrus_nattereri
ENSCAFG00020002052	-	98	77.561	ENSPNAG00000028408	pabpc1a	66	77.561	Pygocentrus_nattereri
ENSCAFG00020002052	-	96	99.500	ENSRBIG00000027173	-	100	99.500	Rhinopithecus_bieti
ENSCAFG00020002052	-	95	78.788	ENSRBIG00000028738	-	69	78.788	Rhinopithecus_bieti
ENSCAFG00020002052	-	96	99.500	ENSRROG00000017404	-	100	99.500	Rhinopithecus_roxellana
ENSCAFG00020002052	-	97	67.980	ENSSHAG00000000511	-	61	67.980	Sarcophilus_harrisii
ENSCAFG00020002052	-	98	79.024	ENSSFOG00015002752	-	59	79.024	Scleropages_formosus
ENSCAFG00020002052	-	98	79.024	ENSSFOG00015006662	pabpc1a	59	79.024	Scleropages_formosus
ENSCAFG00020002052	-	83	68.966	ENSSFOG00015019668	-	67	68.966	Scleropages_formosus
ENSCAFG00020002052	-	98	78.049	ENSSMAG00000006869	pabpc1b	59	78.049	Scophthalmus_maximus
ENSCAFG00020002052	-	98	79.024	ENSSMAG00000010803	pabpc1a	60	79.024	Scophthalmus_maximus
ENSCAFG00020002052	-	98	78.537	ENSSDUG00000011965	pabpc1b	60	78.537	Seriola_dumerili
ENSCAFG00020002052	-	98	79.024	ENSSDUG00000006675	pabpc1a	59	79.024	Seriola_dumerili
ENSCAFG00020002052	-	98	78.537	ENSSLDG00000014156	pabpc1b	60	78.537	Seriola_lalandi_dorsalis
ENSCAFG00020002052	-	98	79.024	ENSSLDG00000011661	pabpc1a	59	79.024	Seriola_lalandi_dorsalis
ENSCAFG00020002052	-	98	78.537	ENSSPAG00000019265	pabpc1b	65	78.537	Stegastes_partitus
ENSCAFG00020002052	-	98	79.024	ENSSPAG00000014453	-	59	79.024	Stegastes_partitus
ENSCAFG00020002052	-	96	100.000	ENSSSCG00000032167	-	100	100.000	Sus_scrofa
ENSCAFG00020002052	-	96	100.000	ENSSSCG00000036336	-	100	100.000	Sus_scrofa
ENSCAFG00020002052	-	98	78.537	ENSTRUG00000003767	-	61	78.537	Takifugu_rubripes
ENSCAFG00020002052	-	98	79.024	ENSTRUG00000011577	-	59	79.024	Takifugu_rubripes
ENSCAFG00020002052	-	98	79.024	ENSTNIG00000009153	pabpc1b	59	79.024	Tetraodon_nigroviridis
ENSCAFG00020002052	-	98	74.882	ENSTNIG00000013307	pabpc1a	59	74.882	Tetraodon_nigroviridis
ENSCAFG00020002052	-	96	100.000	ENSTTRG00000013181	-	100	100.000	Tursiops_truncatus
ENSCAFG00020002052	-	96	100.000	ENSUAMG00000008089	-	100	100.000	Ursus_americanus
ENSCAFG00020002052	-	98	58.000	ENSUMAG00000023926	-	89	57.214	Ursus_maritimus
ENSCAFG00020002052	-	96	100.000	ENSUMAG00000003364	-	100	100.000	Ursus_maritimus
ENSCAFG00020002052	-	98	99.512	ENSVVUG00000015892	-	99	99.512	Vulpes_vulpes
ENSCAFG00020002052	-	98	78.537	ENSXCOG00000019901	pabpc1b	62	78.537	Xiphophorus_couchianus
ENSCAFG00020002052	-	98	79.024	ENSXCOG00000017066	pabpc1a	63	79.024	Xiphophorus_couchianus
ENSCAFG00020002052	-	98	79.024	ENSXMAG00000002555	pabpc1a	62	79.024	Xiphophorus_maculatus
ENSCAFG00020002052	-	98	78.537	ENSXMAG00000003753	pabpc1b	90	79.397	Xiphophorus_maculatus