EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAFG00020002189 (Gene tree)
Gene ID: 112667444
Gene Symbol: TNRC6B
Alias: KIAA1093
Full Name: trinucleotide repeat containing 6B
Gene Type: protein_coding
Species: Canis_lupus_dingo
Status: putative
Strand: Minus strand
Length: 153687 bases
Position: chrQKWQ01001844.1:9624258-9777944
Accession: 112667444
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00020002686	Ago_hook	PF10427.9	1.2e-19	1	1
ENSCAFP00020002705	Ago_hook	PF10427.9	1.4e-19	1	1
ENSCAFP00020002737	Ago_hook	PF10427.9	1.5e-19	1	1
ENSCAFP00020002742	Ago_hook	PF10427.9	8.7e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00020003134	TNRC6B-202	5394	XM_025459141	ENSCAFP00020002705	1797 (aa)	XP_025314926	-
ENSCAFT00020003111	TNRC6B-201	5298	-	ENSCAFP00020002686	1765 (aa)	-	-
ENSCAFT00020003170	TNRC6B-203	5175	-	ENSCAFP00020002737	1724 (aa)	-	-
ENSCAFT00020003175	TNRC6B-204	5016	-	ENSCAFP00020002742	1671 (aa)	-	-

Gene Model

Click here to download ENSCAFG00020002189's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00020002189's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAFG00020002189	TNRC6B	100	37.975	ENSCAFG00020021160	TNRC6A	99	39.047
ENSCAFG00020002189	TNRC6B	99	34.524	ENSCAFG00020006661	TNRC6C	93	35.622

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00020002189	TNRC6B	99	95.204	ENSG00000100354	TNRC6B	99	97.059	Homo_sapiens
ENSCAFG00020002189	TNRC6B	99	93.841	ENSAMEG00000011025	TNRC6B	100	92.684	Ailuropoda_melanoleuca
ENSCAFG00020002189	TNRC6B	99	86.364	ENSAPLG00000009347	TNRC6B	99	86.364	Anas_platyrhynchos
ENSCAFG00020002189	TNRC6B	99	71.893	ENSACAG00000007281	TNRC6B	98	73.405	Anolis_carolinensis
ENSCAFG00020002189	TNRC6B	99	95.204	ENSANAG00000035042	TNRC6B	99	96.941	Aotus_nancymaae
ENSCAFG00020002189	TNRC6B	87	45.567	ENSAMXG00000008707	tnrc6b	82	47.059	Astyanax_mexicanus
ENSCAFG00020002189	TNRC6B	98	96.234	ENSBTAG00000021076	TNRC6B	99	96.234	Bos_taurus
ENSCAFG00020002189	TNRC6B	99	94.948	ENSCJAG00000002732	TNRC6B	99	99.437	Callithrix_jacchus
ENSCAFG00020002189	TNRC6B	99	98.347	ENSCAFG00000001255	TNRC6B	100	96.288	Canis_familiaris
ENSCAFG00020002189	TNRC6B	99	96.435	ENSCHIG00000003491	TNRC6B	100	96.435	Capra_hircus
ENSCAFG00020002189	TNRC6B	99	94.967	ENSTSYG00000011836	TNRC6B	100	95.748	Carlito_syrichta
ENSCAFG00020002189	TNRC6B	99	96.656	ENSCPOG00000005705	TNRC6B	99	96.656	Cavia_porcellus
ENSCAFG00020002189	TNRC6B	99	95.181	ENSCCAG00000019912	TNRC6B	99	95.017	Cebus_capucinus
ENSCAFG00020002189	TNRC6B	99	94.951	ENSCATG00000029291	TNRC6B	99	96.560	Cercocebus_atys
ENSCAFG00020002189	TNRC6B	99	96.988	ENSCLAG00000016942	TNRC6B	99	96.988	Chinchilla_lanigera
ENSCAFG00020002189	TNRC6B	98	92.373	ENSCSAG00000006021	TNRC6B	99	92.429	Chlorocebus_sabaeus
ENSCAFG00020002189	TNRC6B	92	92.105	ENSCPBG00000022932	TNRC6B	96	92.105	Chrysemys_picta_bellii
ENSCAFG00020002189	TNRC6B	99	94.675	ENSCANG00000030776	TNRC6B	99	96.357	Colobus_angolensis_palliatus
ENSCAFG00020002189	TNRC6B	98	94.598	ENSCGRG00001020166	Tnrc6b	99	94.810	Cricetulus_griseus_chok1gshd
ENSCAFG00020002189	TNRC6B	99	94.892	ENSCGRG00000016696	Tnrc6b	99	94.904	Cricetulus_griseus_crigri
ENSCAFG00020002189	TNRC6B	99	95.822	ENSDNOG00000012744	TNRC6B	100	95.822	Dasypus_novemcinctus
ENSCAFG00020002189	TNRC6B	99	96.329	ENSDORG00000003386	Tnrc6b	99	96.329	Dipodomys_ordii
ENSCAFG00020002189	TNRC6B	97	94.531	ENSETEG00000006570	TNRC6B	94	94.531	Echinops_telfairi
ENSCAFG00020002189	TNRC6B	99	98.772	ENSEASG00005005306	TNRC6B	99	98.772	Equus_asinus_asinus
ENSCAFG00020002189	TNRC6B	99	98.224	ENSECAG00000009759	TNRC6B	100	99.500	Equus_caballus
ENSCAFG00020002189	TNRC6B	59	97.436	ENSEEUG00000008690	-	62	97.436	Erinaceus_europaeus
ENSCAFG00020002189	TNRC6B	99	98.338	ENSFCAG00000004791	TNRC6B	99	98.338	Felis_catus
ENSCAFG00020002189	TNRC6B	96	86.824	ENSFALG00000012195	TNRC6B	100	88.412	Ficedula_albicollis
ENSCAFG00020002189	TNRC6B	99	96.604	ENSFDAG00000021368	TNRC6B	99	96.604	Fukomys_damarensis
ENSCAFG00020002189	TNRC6B	99	87.579	ENSGALG00000012050	TNRC6B	97	88.670	Gallus_gallus
ENSCAFG00020002189	TNRC6B	98	88.027	ENSGAGG00000025188	TNRC6B	98	87.634	Gopherus_agassizii
ENSCAFG00020002189	TNRC6B	99	95.145	ENSGGOG00000008444	TNRC6B	99	97.059	Gorilla_gorilla
ENSCAFG00020002189	TNRC6B	99	96.596	ENSHGLG00000009306	TNRC6B	99	96.596	Heterocephalus_glaber_female
ENSCAFG00020002189	TNRC6B	99	96.530	ENSHGLG00100018108	TNRC6B	100	96.530	Heterocephalus_glaber_male
ENSCAFG00020002189	TNRC6B	78	45.604	ENSIPUG00000001515	tnrc6b	91	46.142	Ictalurus_punctatus
ENSCAFG00020002189	TNRC6B	99	96.552	ENSSTOG00000008927	TNRC6B	99	96.552	Ictidomys_tridecemlineatus
ENSCAFG00020002189	TNRC6B	99	95.259	ENSJJAG00000015779	Tnrc6b	99	95.161	Jaculus_jaculus
ENSCAFG00020002189	TNRC6B	98	61.543	ENSLACG00000000628	-	98	61.830	Latimeria_chalumnae
ENSCAFG00020002189	TNRC6B	77	96.442	ENSLAFG00000014473	TNRC6B	100	95.690	Loxodonta_africana
ENSCAFG00020002189	TNRC6B	99	94.845	ENSMFAG00000003862	TNRC6B	99	96.560	Macaca_fascicularis
ENSCAFG00020002189	TNRC6B	99	96.453	ENSMMUG00000021345	TNRC6B	100	96.453	Macaca_mulatta
ENSCAFG00020002189	TNRC6B	98	96.382	ENSMNEG00000042745	TNRC6B	100	96.382	Macaca_nemestrina
ENSCAFG00020002189	TNRC6B	99	94.911	ENSMLEG00000041780	TNRC6B	99	96.827	Mandrillus_leucophaeus
ENSCAFG00020002189	TNRC6B	98	83.605	ENSMGAG00000012333	TNRC6B	99	83.033	Meleagris_gallopavo
ENSCAFG00020002189	TNRC6B	98	94.790	ENSMAUG00000016123	Tnrc6b	98	94.734	Mesocricetus_auratus
ENSCAFG00020002189	TNRC6B	99	95.703	ENSMICG00000014056	TNRC6B	100	96.552	Microcebus_murinus
ENSCAFG00020002189	TNRC6B	96	95.000	ENSMOCG00000020334	Tnrc6b	99	95.000	Microtus_ochrogaster
ENSCAFG00020002189	TNRC6B	99	94.652	MGP_CAROLIEiJ_G0020043	Tnrc6b	99	94.667	Mus_caroli
ENSCAFG00020002189	TNRC6B	99	94.596	ENSMUSG00000047888	Tnrc6b	99	94.611	Mus_musculus
ENSCAFG00020002189	TNRC6B	99	94.259	MGP_PahariEiJ_G0020045	Tnrc6b	99	94.275	Mus_pahari
ENSCAFG00020002189	TNRC6B	99	94.819	MGP_SPRETEiJ_G0020941	Tnrc6b	99	94.833	Mus_spretus
ENSCAFG00020002189	TNRC6B	95	99.049	ENSMPUG00000016442	TNRC6B	99	89.890	Mustela_putorius_furo
ENSCAFG00020002189	TNRC6B	98	91.717	ENSMLUG00000008765	TNRC6B	99	90.671	Myotis_lucifugus
ENSCAFG00020002189	TNRC6B	99	95.100	ENSNGAG00000021294	Tnrc6b	99	95.003	Nannospalax_galili
ENSCAFG00020002189	TNRC6B	89	95.701	ENSNLEG00000015311	TNRC6B	99	97.294	Nomascus_leucogenys
ENSCAFG00020002189	TNRC6B	90	93.532	ENSOPRG00000012054	TNRC6B	86	93.532	Ochotona_princeps
ENSCAFG00020002189	TNRC6B	99	96.611	ENSODEG00000013146	TNRC6B	99	96.611	Octodon_degus
ENSCAFG00020002189	TNRC6B	50	47.130	ENSONIG00000019679	-	99	41.782	Oreochromis_niloticus
ENSCAFG00020002189	TNRC6B	99	95.241	ENSOCUG00000016128	TNRC6B	99	95.296	Oryctolagus_cuniculus
ENSCAFG00020002189	TNRC6B	98	91.889	ENSOGAG00000011096	TNRC6B	99	90.623	Otolemur_garnettii
ENSCAFG00020002189	TNRC6B	99	96.077	ENSOARG00000017238	TNRC6B	99	96.077	Ovis_aries
ENSCAFG00020002189	TNRC6B	99	95.204	ENSPPAG00000028514	TNRC6B	99	97.403	Pan_paniscus
ENSCAFG00020002189	TNRC6B	99	96.921	ENSPPRG00000017741	TNRC6B	99	98.585	Panthera_pardus
ENSCAFG00020002189	TNRC6B	99	92.849	ENSPTIG00000022064	TNRC6B	98	93.322	Panthera_tigris_altaica
ENSCAFG00020002189	TNRC6B	99	95.263	ENSPTRG00000047826	TNRC6B	99	97.059	Pan_troglodytes
ENSCAFG00020002189	TNRC6B	99	89.480	ENSPANG00000009271	TNRC6B	99	94.017	Papio_anubis
ENSCAFG00020002189	TNRC6B	98	88.076	ENSPSIG00000005318	TNRC6B	99	87.739	Pelodiscus_sinensis
ENSCAFG00020002189	TNRC6B	99	94.435	ENSPEMG00000011403	Tnrc6b	99	94.506	Peromyscus_maniculatus_bairdii
ENSCAFG00020002189	TNRC6B	99	85.477	ENSPCIG00000020347	TNRC6B	99	86.705	Phascolarctos_cinereus
ENSCAFG00020002189	TNRC6B	88	41.667	ENSPFOG00000006033	-	94	42.466	Poecilia_formosa
ENSCAFG00020002189	TNRC6B	64	43.392	ENSPLAG00000001418	-	88	44.420	Poecilia_latipinna
ENSCAFG00020002189	TNRC6B	73	60.065	ENSPMEG00000006371	-	58	49.517	Poecilia_mexicana
ENSCAFG00020002189	TNRC6B	99	94.588	ENSPPYG00000011849	TNRC6B	99	93.592	Pongo_abelii
ENSCAFG00020002189	TNRC6B	76	93.416	ENSPCAG00000008739	TNRC6B	76	92.208	Procavia_capensis
ENSCAFG00020002189	TNRC6B	99	95.871	ENSPCOG00000020790	TNRC6B	99	97.297	Propithecus_coquereli
ENSCAFG00020002189	TNRC6B	92	97.051	ENSPVAG00000004975	TNRC6B	93	96.522	Pteropus_vampyrus
ENSCAFG00020002189	TNRC6B	75	44.254	ENSPNAG00000011713	tnrc6b	79	43.884	Pygocentrus_nattereri
ENSCAFG00020002189	TNRC6B	99	94.173	ENSRNOG00000024907	Tnrc6b	99	94.023	Rattus_norvegicus
ENSCAFG00020002189	TNRC6B	99	94.697	ENSRBIG00000035576	TNRC6B	100	96.592	Rhinopithecus_bieti
ENSCAFG00020002189	TNRC6B	98	96.043	ENSRROG00000031135	TNRC6B	100	96.043	Rhinopithecus_roxellana
ENSCAFG00020002189	TNRC6B	99	95.207	ENSSBOG00000029743	TNRC6B	100	93.669	Saimiri_boliviensis_boliviensis
ENSCAFG00020002189	TNRC6B	98	81.897	ENSSHAG00000009692	TNRC6B	99	81.325	Sarcophilus_harrisii
ENSCAFG00020002189	TNRC6B	72	83.898	ENSSARG00000007971	-	73	83.898	Sorex_araneus
ENSCAFG00020002189	TNRC6B	93	81.495	ENSSPUG00000010801	TNRC6B	100	81.257	Sphenodon_punctatus
ENSCAFG00020002189	TNRC6B	99	96.948	ENSSSCG00000000078	TNRC6B	99	96.908	Sus_scrofa
ENSCAFG00020002189	TNRC6B	92	86.203	ENSTGUG00000010138	-	98	85.886	Taeniopygia_guttata
ENSCAFG00020002189	TNRC6B	99	92.412	ENSTTRG00000011465	TNRC6B	99	91.509	Tursiops_truncatus
ENSCAFG00020002189	TNRC6B	100	98.220	ENSUAMG00000007174	TNRC6B	99	98.381	Ursus_americanus
ENSCAFG00020002189	TNRC6B	98	98.812	ENSUMAG00000014336	TNRC6B	100	99.174	Ursus_maritimus
ENSCAFG00020002189	TNRC6B	69	91.368	ENSVPAG00000001467	TNRC6B	74	90.000	Vicugna_pacos
ENSCAFG00020002189	TNRC6B	99	99.331	ENSVVUG00000007064	TNRC6B	100	99.331	Vulpes_vulpes