EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAFG00020002468 (Gene tree)
Gene ID: 112654601
Gene Symbol: RBM46
Alias: CT68|MGC27016
Full Name: RNA binding motif protein 46
Gene Type: protein_coding
Species: Canis_lupus_dingo
Status: putative
Strand: Plus strand
Length: 34876 bases
Position: chrQKWQ01001620.1:35279716-35314591
Accession: 112654601
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00020002943	DND1_DSRM	PF14709.7	1.5e-27	1	1
ENSCAFP00020002942	DND1_DSRM	PF14709.7	1.7e-27	1	1
ENSCAFP00020002943	RRM_1	PF00076.22	8e-37	1	3
ENSCAFP00020002943	RRM_1	PF00076.22	8e-37	2	3
ENSCAFP00020002943	RRM_1	PF00076.22	8e-37	3	3
ENSCAFP00020002942	RRM_1	PF00076.22	1.1e-36	1	3
ENSCAFP00020002942	RRM_1	PF00076.22	1.1e-36	2	3
ENSCAFP00020002942	RRM_1	PF00076.22	1.1e-36	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00020003393	RBM46-202	1485	-	ENSCAFP00020002943	494 (aa)	-	-
ENSCAFT00020003391	RBM46-201	1602	-	ENSCAFP00020002942	533 (aa)	XP_025294959	UPI00004A5A00

Gene Model

Click here to download ENSCAFG00020002468's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00020002468's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAFG00020002468	RBM46	60	54.667	ENSCAFG00020015848	SYNCRIP	53	54.000
ENSCAFG00020002468	RBM46	50	30.714	ENSCAFG00020013891	TIAL1	71	30.714
ENSCAFG00020002468	RBM46	61	73.000	ENSCAFG00020010558	RBM47	68	69.592
ENSCAFG00020002468	RBM46	81	71.333	ENSCAFG00020026421	A1CF	78	71.333

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00020002468	RBM46	100	98.499	ENSG00000151962	RBM46	100	100.000	Homo_sapiens
ENSCAFG00020002468	RBM46	93	66.239	ENSAPOG00000009209	rbm46	91	66.381	Acanthochromis_polyacanthus
ENSCAFG00020002468	RBM46	100	99.062	ENSAMEG00000013290	RBM46	100	99.062	Ailuropoda_melanoleuca
ENSCAFG00020002468	RBM46	95	59.833	ENSACIG00000014500	rbm46	91	60.084	Amphilophus_citrinellus
ENSCAFG00020002468	RBM46	90	67.040	ENSAOCG00000001892	-	98	62.028	Amphiprion_ocellaris
ENSCAFG00020002468	RBM46	90	67.040	ENSAPEG00000017762	rbm46	99	65.864	Amphiprion_percula
ENSCAFG00020002468	RBM46	98	62.887	ENSATEG00000010775	rbm46	98	60.421	Anabas_testudineus
ENSCAFG00020002468	RBM46	95	87.794	ENSAPLG00000005116	RBM46	100	87.794	Anas_platyrhynchos
ENSCAFG00020002468	RBM46	100	89.306	ENSACAG00000015599	RBM46	100	89.306	Anolis_carolinensis
ENSCAFG00020002468	RBM46	100	96.060	ENSANAG00000029193	RBM46	100	96.060	Aotus_nancymaae
ENSCAFG00020002468	RBM46	95	62.213	ENSACLG00000016153	rbm46	94	60.073	Astatotilapia_calliptera
ENSCAFG00020002468	RBM46	96	60.595	ENSAMXG00000020892	-	99	60.595	Astyanax_mexicanus
ENSCAFG00020002468	RBM46	91	67.627	ENSAMXG00000009397	rbm46	98	67.627	Astyanax_mexicanus
ENSCAFG00020002468	RBM46	100	97.749	ENSBTAG00000001696	RBM46	100	97.749	Bos_taurus
ENSCAFG00020002468	RBM46	100	95.122	ENSCJAG00000001768	RBM46	99	97.216	Callithrix_jacchus
ENSCAFG00020002468	RBM46	100	100.000	ENSCAFG00000008473	RBM46	100	100.000	Canis_familiaris
ENSCAFG00020002468	RBM46	100	97.373	ENSCHIG00000000502	RBM46	100	97.373	Capra_hircus
ENSCAFG00020002468	RBM46	95	98.501	ENSTSYG00000010435	RBM46	99	98.501	Carlito_syrichta
ENSCAFG00020002468	RBM46	75	92.412	ENSCAPG00000011841	-	99	92.412	Cavia_aperea
ENSCAFG00020002468	RBM46	97	94.421	ENSCAPG00000011928	-	99	94.421	Cavia_aperea
ENSCAFG00020002468	RBM46	100	91.636	ENSCPOG00000019272	-	100	91.636	Cavia_porcellus
ENSCAFG00020002468	RBM46	94	94.194	ENSCPOG00000020396	-	99	89.084	Cavia_porcellus
ENSCAFG00020002468	RBM46	100	96.067	ENSCPOG00000010284	-	100	96.067	Cavia_porcellus
ENSCAFG00020002468	RBM46	100	97.561	ENSCCAG00000027619	-	100	97.561	Cebus_capucinus
ENSCAFG00020002468	RBM46	100	79.925	ENSCCAG00000001323	-	100	79.925	Cebus_capucinus
ENSCAFG00020002468	RBM46	95	98.715	ENSCATG00000040148	RBM46	99	98.715	Cercocebus_atys
ENSCAFG00020002468	RBM46	95	95.085	ENSCLAG00000011886	-	99	91.699	Chinchilla_lanigera
ENSCAFG00020002468	RBM46	100	95.122	ENSCLAG00000005846	-	99	96.788	Chinchilla_lanigera
ENSCAFG00020002468	RBM46	100	98.124	ENSCSAG00000003263	RBM46	100	98.124	Chlorocebus_sabaeus
ENSCAFG00020002468	RBM46	100	97.373	ENSCHOG00000003429	RBM46	100	97.373	Choloepus_hoffmanni
ENSCAFG00020002468	RBM46	90	94.382	ENSCPBG00000009314	RBM46	97	94.382	Chrysemys_picta_bellii
ENSCAFG00020002468	RBM46	95	98.501	ENSCANG00000039065	RBM46	99	98.501	Colobus_angolensis_palliatus
ENSCAFG00020002468	RBM46	100	98.124	ENSCGRG00001016714	Rbm46	100	98.124	Cricetulus_griseus_chok1gshd
ENSCAFG00020002468	RBM46	100	98.124	ENSCGRG00000011738	Rbm46	100	98.124	Cricetulus_griseus_crigri
ENSCAFG00020002468	RBM46	90	59.161	ENSCSEG00000005530	rbm46	96	59.161	Cynoglossus_semilaevis
ENSCAFG00020002468	RBM46	93	64.286	ENSCVAG00000021013	rbm46	96	64.086	Cyprinodon_variegatus
ENSCAFG00020002468	RBM46	97	64.083	ENSDARG00000079452	rbm46	99	64.068	Danio_rerio
ENSCAFG00020002468	RBM46	100	98.874	ENSDNOG00000016195	RBM46	100	98.874	Dasypus_novemcinctus
ENSCAFG00020002468	RBM46	100	98.124	ENSDORG00000006405	Rbm46	100	98.124	Dipodomys_ordii
ENSCAFG00020002468	RBM46	100	93.996	ENSETEG00000014902	RBM46	100	93.996	Echinops_telfairi
ENSCAFG00020002468	RBM46	100	97.373	ENSEASG00005015821	RBM46	100	97.373	Equus_asinus_asinus
ENSCAFG00020002468	RBM46	97	95.455	ENSECAG00000007649	RBM46	99	95.455	Equus_caballus
ENSCAFG00020002468	RBM46	100	94.559	ENSEEUG00000011824	RBM46	100	94.559	Erinaceus_europaeus
ENSCAFG00020002468	RBM46	74	72.480	ENSELUG00000008166	rbm46	94	72.480	Esox_lucius
ENSCAFG00020002468	RBM46	100	98.687	ENSFCAG00000029812	RBM46	100	98.687	Felis_catus
ENSCAFG00020002468	RBM46	98	83.745	ENSFALG00000013157	RBM46	92	86.296	Ficedula_albicollis
ENSCAFG00020002468	RBM46	100	93.246	ENSFDAG00000019281	-	100	93.246	Fukomys_damarensis
ENSCAFG00020002468	RBM46	95	92.735	ENSFDAG00000006445	-	99	88.294	Fukomys_damarensis
ENSCAFG00020002468	RBM46	80	62.690	ENSFHEG00000013257	rbm46	87	62.690	Fundulus_heteroclitus
ENSCAFG00020002468	RBM46	96	79.449	ENSGALG00000009278	RBM46	99	80.086	Gallus_gallus
ENSCAFG00020002468	RBM46	58	81.185	ENSGAFG00000020245	rbm46	89	81.185	Gambusia_affinis
ENSCAFG00020002468	RBM46	95	94.444	ENSGAGG00000002019	RBM46	95	90.180	Gopherus_agassizii
ENSCAFG00020002468	RBM46	100	98.311	ENSGGOG00000001876	RBM46	100	98.311	Gorilla_gorilla
ENSCAFG00020002468	RBM46	91	62.054	ENSHBUG00000009609	rbm46	91	66.905	Haplochromis_burtoni
ENSCAFG00020002468	RBM46	98	79.658	ENSHGLG00000002940	-	100	79.658	Heterocephalus_glaber_female
ENSCAFG00020002468	RBM46	100	87.242	ENSHGLG00000002463	-	99	95.150	Heterocephalus_glaber_female
ENSCAFG00020002468	RBM46	97	76.996	ENSHGLG00000010742	-	99	76.046	Heterocephalus_glaber_female
ENSCAFG00020002468	RBM46	97	76.996	ENSHGLG00100004977	-	99	76.046	Heterocephalus_glaber_male
ENSCAFG00020002468	RBM46	100	93.621	ENSHGLG00100012752	-	99	95.075	Heterocephalus_glaber_male
ENSCAFG00020002468	RBM46	98	76.000	ENSHGLG00100018987	-	99	76.000	Heterocephalus_glaber_male
ENSCAFG00020002468	RBM46	94	51.717	ENSHCOG00000012998	rbm46	93	51.717	Hippocampus_comes
ENSCAFG00020002468	RBM46	99	64.286	ENSIPUG00000024038	rbm46	99	64.286	Ictalurus_punctatus
ENSCAFG00020002468	RBM46	100	99.062	ENSSTOG00000007918	RBM46	100	99.062	Ictidomys_tridecemlineatus
ENSCAFG00020002468	RBM46	95	96.154	ENSJJAG00000003902	Rbm46	99	96.146	Jaculus_jaculus
ENSCAFG00020002468	RBM46	94	64.346	ENSKMAG00000015127	rbm46	100	59.817	Kryptolebias_marmoratus
ENSCAFG00020002468	RBM46	100	87.266	ENSLACG00000002062	RBM46	100	87.266	Latimeria_chalumnae
ENSCAFG00020002468	RBM46	96	73.879	ENSLOCG00000008298	rbm46	96	77.679	Lepisosteus_oculatus
ENSCAFG00020002468	RBM46	95	99.143	ENSLAFG00000015448	RBM46	99	99.143	Loxodonta_africana
ENSCAFG00020002468	RBM46	95	99.143	ENSMFAG00000043485	RBM46	99	99.143	Macaca_fascicularis
ENSCAFG00020002468	RBM46	97	96.694	ENSMMUG00000021147	RBM46	99	96.694	Macaca_mulatta
ENSCAFG00020002468	RBM46	95	99.143	ENSMNEG00000002787	RBM46	99	99.143	Macaca_nemestrina
ENSCAFG00020002468	RBM46	95	98.501	ENSMLEG00000029756	RBM46	99	98.501	Mandrillus_leucophaeus
ENSCAFG00020002468	RBM46	91	66.813	ENSMAMG00000009093	rbm46	99	61.079	Mastacembelus_armatus
ENSCAFG00020002468	RBM46	91	65.556	ENSMZEG00005027849	rbm46	97	63.617	Maylandia_zebra
ENSCAFG00020002468	RBM46	95	80.514	ENSMGAG00000001457	RBM46	99	80.514	Meleagris_gallopavo
ENSCAFG00020002468	RBM46	100	98.124	ENSMAUG00000009911	Rbm46	100	98.124	Mesocricetus_auratus
ENSCAFG00020002468	RBM46	100	98.687	ENSMICG00000042747	RBM46	100	98.687	Microcebus_murinus
ENSCAFG00020002468	RBM46	100	98.311	ENSMOCG00000001188	Rbm46	100	98.311	Microtus_ochrogaster
ENSCAFG00020002468	RBM46	91	63.755	ENSMMOG00000011214	rbm46	97	58.857	Mola_mola
ENSCAFG00020002468	RBM46	98	96.266	ENSMODG00000001302	RBM46	100	89.365	Monodelphis_domestica
ENSCAFG00020002468	RBM46	89	63.288	ENSMALG00000006185	rbm46	93	63.514	Monopterus_albus
ENSCAFG00020002468	RBM46	100	97.373	MGP_CAROLIEiJ_G0025101	Rbm46	99	98.501	Mus_caroli
ENSCAFG00020002468	RBM46	100	97.186	ENSMUSG00000033882	Rbm46	100	97.186	Mus_musculus
ENSCAFG00020002468	RBM46	100	97.561	MGP_PahariEiJ_G0026544	Rbm46	100	97.561	Mus_pahari
ENSCAFG00020002468	RBM46	100	96.998	MGP_SPRETEiJ_G0026043	Rbm46	100	96.998	Mus_spretus
ENSCAFG00020002468	RBM46	97	97.314	ENSMPUG00000005670	RBM46	99	97.314	Mustela_putorius_furo
ENSCAFG00020002468	RBM46	100	98.127	ENSMLUG00000003221	RBM46	100	98.127	Myotis_lucifugus
ENSCAFG00020002468	RBM46	100	96.248	ENSNGAG00000004231	Rbm46	99	97.645	Nannospalax_galili
ENSCAFG00020002468	RBM46	91	65.848	ENSNBRG00000000273	rbm46	84	65.919	Neolamprologus_brichardi
ENSCAFG00020002468	RBM46	95	98.929	ENSNLEG00000006184	RBM46	99	98.929	Nomascus_leucogenys
ENSCAFG00020002468	RBM46	84	98.558	ENSMEUG00000013328	RBM46	100	98.558	Notamacropus_eugenii
ENSCAFG00020002468	RBM46	57	97.880	ENSOPRG00000007136	RBM46	100	97.880	Ochotona_princeps
ENSCAFG00020002468	RBM46	95	94.658	ENSODEG00000018002	-	91	94.658	Octodon_degus
ENSCAFG00020002468	RBM46	100	93.433	ENSODEG00000000735	-	99	95.075	Octodon_degus
ENSCAFG00020002468	RBM46	92	66.013	ENSONIG00000014096	rbm46	99	65.021	Oreochromis_niloticus
ENSCAFG00020002468	RBM46	95	91.239	ENSOANG00000002141	RBM46	97	91.045	Ornithorhynchus_anatinus
ENSCAFG00020002468	RBM46	100	98.874	ENSOCUG00000017859	RBM46	100	98.874	Oryctolagus_cuniculus
ENSCAFG00020002468	RBM46	94	62.208	ENSORLG00000002429	rbm46	97	57.350	Oryzias_latipes
ENSCAFG00020002468	RBM46	94	62.473	ENSORLG00020022154	rbm46	97	57.827	Oryzias_latipes_hni
ENSCAFG00020002468	RBM46	94	62.851	ENSORLG00015020234	rbm46	96	61.983	Oryzias_latipes_hsok
ENSCAFG00020002468	RBM46	90	62.971	ENSOMEG00000022580	rbm46	99	58.523	Oryzias_melastigma
ENSCAFG00020002468	RBM46	100	99.250	ENSOGAG00000005647	RBM46	100	99.250	Otolemur_garnettii
ENSCAFG00020002468	RBM46	100	97.936	ENSOARG00000016406	RBM46	100	97.936	Ovis_aries
ENSCAFG00020002468	RBM46	95	99.143	ENSPPAG00000043236	RBM46	99	99.143	Pan_paniscus
ENSCAFG00020002468	RBM46	100	98.499	ENSPPRG00000009416	RBM46	100	98.499	Panthera_pardus
ENSCAFG00020002468	RBM46	100	98.499	ENSPTIG00000017449	RBM46	100	98.499	Panthera_tigris_altaica
ENSCAFG00020002468	RBM46	95	99.143	ENSPTRG00000016538	RBM46	99	99.143	Pan_troglodytes
ENSCAFG00020002468	RBM46	100	98.687	ENSPANG00000004186	RBM46	100	98.687	Papio_anubis
ENSCAFG00020002468	RBM46	95	70.426	ENSPKIG00000015334	rbm46	92	67.105	Paramormyrops_kingsleyae
ENSCAFG00020002468	RBM46	96	92.531	ENSPSIG00000006429	RBM46	98	92.531	Pelodiscus_sinensis
ENSCAFG00020002468	RBM46	91	82.022	ENSPMGG00000019872	rbm46	94	82.022	Periophthalmus_magnuspinnatus
ENSCAFG00020002468	RBM46	100	98.124	ENSPEMG00000013899	Rbm46	100	98.124	Peromyscus_maniculatus_bairdii
ENSCAFG00020002468	RBM46	100	97.561	ENSPCIG00000029626	RBM46	100	97.561	Phascolarctos_cinereus
ENSCAFG00020002468	RBM46	93	79.661	ENSPFOG00000001079	rbm46	96	79.661	Poecilia_formosa
ENSCAFG00020002468	RBM46	96	62.319	ENSPLAG00000004541	rbm46	98	58.333	Poecilia_latipinna
ENSCAFG00020002468	RBM46	96	62.319	ENSPMEG00000015724	rbm46	94	64.565	Poecilia_mexicana
ENSCAFG00020002468	RBM46	94	64.946	ENSPREG00000014464	rbm46	98	64.946	Poecilia_reticulata
ENSCAFG00020002468	RBM46	100	98.311	ENSPPYG00000015144	RBM46	100	98.311	Pongo_abelii
ENSCAFG00020002468	RBM46	99	89.662	ENSPCAG00000003110	RBM46	99	90.414	Procavia_capensis
ENSCAFG00020002468	RBM46	100	97.186	ENSPCOG00000024347	RBM46	100	97.186	Propithecus_coquereli
ENSCAFG00020002468	RBM46	100	98.874	ENSPVAG00000008376	RBM46	100	98.874	Pteropus_vampyrus
ENSCAFG00020002468	RBM46	92	68.365	ENSPNAG00000025312	rbm46	99	64.299	Pygocentrus_nattereri
ENSCAFG00020002468	RBM46	100	98.124	ENSRNOG00000025823	Rbm46	100	98.124	Rattus_norvegicus
ENSCAFG00020002468	RBM46	96	97.246	ENSRBIG00000032583	RBM46	99	97.859	Rhinopithecus_bieti
ENSCAFG00020002468	RBM46	95	98.073	ENSRROG00000044288	RBM46	99	98.073	Rhinopithecus_roxellana
ENSCAFG00020002468	RBM46	100	97.186	ENSSBOG00000033028	RBM46	100	97.186	Saimiri_boliviensis_boliviensis
ENSCAFG00020002468	RBM46	100	97.749	ENSSHAG00000012596	RBM46	100	97.749	Sarcophilus_harrisii
ENSCAFG00020002468	RBM46	98	69.011	ENSSFOG00015000087	rbm46	98	68.441	Scleropages_formosus
ENSCAFG00020002468	RBM46	91	63.393	ENSSMAG00000017042	rbm46	93	63.453	Scophthalmus_maximus
ENSCAFG00020002468	RBM46	93	66.739	ENSSDUG00000020645	rbm46	89	67.031	Seriola_dumerili
ENSCAFG00020002468	RBM46	100	98.499	ENSSARG00000006520	RBM46	100	98.499	Sorex_araneus
ENSCAFG00020002468	RBM46	100	91.604	ENSSPUG00000012525	-	100	91.604	Sphenodon_punctatus
ENSCAFG00020002468	RBM46	96	91.121	ENSSPUG00000004773	-	99	91.121	Sphenodon_punctatus
ENSCAFG00020002468	RBM46	92	63.656	ENSSPAG00000013697	rbm46	95	63.656	Stegastes_partitus
ENSCAFG00020002468	RBM46	95	99.359	ENSSSCG00000008994	RBM46	96	99.496	Sus_scrofa
ENSCAFG00020002468	RBM46	95	84.582	ENSTGUG00000005307	RBM46	100	84.582	Taeniopygia_guttata
ENSCAFG00020002468	RBM46	93	63.895	ENSTRUG00000004237	rbm46	91	64.035	Takifugu_rubripes
ENSCAFG00020002468	RBM46	95	59.875	ENSTNIG00000008714	rbm46	98	56.827	Tetraodon_nigroviridis
ENSCAFG00020002468	RBM46	100	94.184	ENSTBEG00000013949	RBM46	100	94.184	Tupaia_belangeri
ENSCAFG00020002468	RBM46	100	96.060	ENSTTRG00000001239	RBM46	100	96.060	Tursiops_truncatus
ENSCAFG00020002468	RBM46	100	99.062	ENSUAMG00000026593	RBM46	100	99.062	Ursus_americanus
ENSCAFG00020002468	RBM46	100	98.874	ENSUMAG00000016442	RBM46	100	98.874	Ursus_maritimus
ENSCAFG00020002468	RBM46	100	99.812	ENSVVUG00000024957	RBM46	100	99.812	Vulpes_vulpes
ENSCAFG00020002468	RBM46	75	72.900	ENSXETG00000032067	-	100	72.358	Xenopus_tropicalis
ENSCAFG00020002468	RBM46	100	75.235	ENSXETG00000022412	-	99	75.235	Xenopus_tropicalis
ENSCAFG00020002468	RBM46	100	57.435	ENSXETG00000032344	-	100	57.435	Xenopus_tropicalis
ENSCAFG00020002468	RBM46	92	64.807	ENSXMAG00000008237	rbm46	93	63.389	Xiphophorus_maculatus