EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAFG00020002578 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Canis_lupus_dingo
Status: putative
Strand: Plus strand
Length: 156 bases
Position: chrQKWQ01001345.1:8284560-8284715
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00020003056	Ribosomal_L39	PF00832.20	3e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00020003532	-	156	-	ENSCAFP00020003056	51 (aa)	-	UPI0002257F30

Gene Model

Click here to download ENSCAFG00020002578's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00020002578's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAFG00020002578	-	100	94.118	ENSCAFG00020010357	-	100	94.118
ENSCAFG00020002578	-	100	94.118	ENSCAFG00020000437	-	100	94.118
ENSCAFG00020002578	-	98	92.000	ENSCAFG00020025145	-	100	92.000
ENSCAFG00020002578	-	98	85.455	ENSCAFG00020004092	-	89	85.455
ENSCAFG00020002578	-	100	94.118	ENSCAFG00020023650	-	100	94.118
ENSCAFG00020002578	-	100	90.196	ENSCAFG00020017348	-	75	90.196
ENSCAFG00020002578	-	100	84.906	ENSCAFG00020019046	-	100	84.906
ENSCAFG00020002578	-	100	94.118	ENSCAFG00020023515	-	100	94.118
ENSCAFG00020002578	-	100	88.235	ENSCAFG00020027515	-	100	88.235
ENSCAFG00020002578	-	100	94.118	ENSCAFG00020026664	-	100	94.118
ENSCAFG00020002578	-	100	94.118	ENSCAFG00020018445	-	68	94.118
ENSCAFG00020002578	-	100	94.118	ENSCAFG00020013245	-	100	94.118
ENSCAFG00020002578	-	100	94.118	ENSCAFG00020003011	-	100	94.118
ENSCAFG00020002578	-	100	92.157	ENSCAFG00020005870	-	100	92.157
ENSCAFG00020002578	-	100	94.118	ENSCAFG00020022170	-	100	94.118
ENSCAFG00020002578	-	100	94.118	ENSCAFG00020009904	-	100	94.118
ENSCAFG00020002578	-	100	94.118	ENSCAFG00020014857	-	100	94.118
ENSCAFG00020002578	-	100	94.118	ENSCAFG00020026417	-	100	94.118
ENSCAFG00020002578	-	100	94.118	ENSCAFG00020006843	-	100	94.118
ENSCAFG00020002578	-	100	92.157	ENSCAFG00020023883	-	100	92.157
ENSCAFG00020002578	-	100	92.157	ENSCAFG00020012355	-	100	92.157
ENSCAFG00020002578	-	100	94.118	ENSCAFG00020027407	-	100	94.118
ENSCAFG00020002578	-	100	90.196	ENSCAFG00020019302	-	100	90.196
ENSCAFG00020002578	-	100	94.118	ENSCAFG00020026703	-	100	94.118

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00020002578	-	100	96.078	ENSAMEG00000019848	-	100	96.078	Ailuropoda_melanoleuca
ENSCAFG00020002578	-	100	94.118	ENSANAG00000016046	-	100	94.118	Aotus_nancymaae
ENSCAFG00020002578	-	100	90.196	ENSANAG00000016436	-	100	90.196	Aotus_nancymaae
ENSCAFG00020002578	-	100	96.078	ENSANAG00000031418	-	100	96.078	Aotus_nancymaae
ENSCAFG00020002578	-	90	89.130	ENSTSYG00000026787	-	82	89.130	Carlito_syrichta
ENSCAFG00020002578	-	100	92.157	ENSTSYG00000026785	-	100	92.157	Carlito_syrichta
ENSCAFG00020002578	-	100	96.078	ENSCAPG00000007210	-	100	96.078	Cavia_aperea
ENSCAFG00020002578	-	100	96.078	ENSCPOG00000036636	-	100	96.078	Cavia_porcellus
ENSCAFG00020002578	-	100	94.118	ENSCLAG00000017874	-	100	94.118	Chinchilla_lanigera
ENSCAFG00020002578	-	100	92.157	ENSCLAG00000017707	-	100	92.157	Chinchilla_lanigera
ENSCAFG00020002578	-	100	92.157	ENSCGRG00001012052	-	100	92.157	Cricetulus_griseus_chok1gshd
ENSCAFG00020002578	-	100	90.196	ENSCGRG00001003230	Rpl39l	100	90.196	Cricetulus_griseus_chok1gshd
ENSCAFG00020002578	-	100	82.353	ENSCGRG00001008057	-	100	82.353	Cricetulus_griseus_chok1gshd
ENSCAFG00020002578	-	100	90.196	ENSCGRG00000018615	Rpl39l	100	90.196	Cricetulus_griseus_crigri
ENSCAFG00020002578	-	100	92.157	ENSCGRG00000019654	-	100	92.157	Cricetulus_griseus_crigri
ENSCAFG00020002578	-	100	94.118	ENSDORG00000028485	-	100	94.118	Dipodomys_ordii
ENSCAFG00020002578	-	100	92.157	ENSDORG00000027732	-	100	92.157	Dipodomys_ordii
ENSCAFG00020002578	-	100	78.431	ENSFCAG00000044333	RPL39L	100	78.431	Felis_catus
ENSCAFG00020002578	-	100	73.077	ENSFCAG00000038709	-	91	73.077	Felis_catus
ENSCAFG00020002578	-	100	92.157	ENSFDAG00000021400	-	100	92.157	Fukomys_damarensis
ENSCAFG00020002578	-	100	88.235	ENSGGOG00000036596	-	100	88.235	Gorilla_gorilla
ENSCAFG00020002578	-	92	89.362	ENSGGOG00000040312	-	65	89.362	Gorilla_gorilla
ENSCAFG00020002578	-	100	92.157	ENSHGLG00000020604	-	100	92.157	Heterocephalus_glaber_female
ENSCAFG00020002578	-	100	92.157	ENSHGLG00100011216	-	100	92.157	Heterocephalus_glaber_male
ENSCAFG00020002578	-	100	96.078	ENSSTOG00000030492	-	100	96.078	Ictidomys_tridecemlineatus
ENSCAFG00020002578	-	100	94.118	ENSSTOG00000028051	-	100	94.118	Ictidomys_tridecemlineatus
ENSCAFG00020002578	-	100	90.196	ENSJJAG00000010041	-	100	90.196	Jaculus_jaculus
ENSCAFG00020002578	-	100	92.157	ENSLAFG00000028648	-	100	92.157	Loxodonta_africana
ENSCAFG00020002578	-	100	96.078	ENSMFAG00000020492	-	100	96.078	Macaca_fascicularis
ENSCAFG00020002578	-	100	90.196	ENSMMUG00000038479	-	100	90.196	Macaca_mulatta
ENSCAFG00020002578	-	100	96.078	ENSMMUG00000045452	-	100	96.078	Macaca_mulatta
ENSCAFG00020002578	-	100	96.078	ENSMMUG00000044527	-	100	96.078	Macaca_mulatta
ENSCAFG00020002578	-	100	96.078	ENSMNEG00000000126	-	100	96.078	Macaca_nemestrina
ENSCAFG00020002578	-	100	88.235	ENSMNEG00000001683	-	68	88.235	Macaca_nemestrina
ENSCAFG00020002578	-	100	96.078	ENSMLEG00000003517	-	100	96.078	Mandrillus_leucophaeus
ENSCAFG00020002578	-	98	96.000	ENSMLEG00000000739	-	100	96.000	Mandrillus_leucophaeus
ENSCAFG00020002578	-	100	96.078	ENSMLEG00000018088	-	100	96.078	Mandrillus_leucophaeus
ENSCAFG00020002578	-	100	90.196	ENSMLEG00000009433	-	100	90.196	Mandrillus_leucophaeus
ENSCAFG00020002578	-	100	90.196	ENSMAUG00000002516	-	100	90.196	Mesocricetus_auratus
ENSCAFG00020002578	-	100	90.196	ENSMAUG00000015776	Rpl39l	100	90.196	Mesocricetus_auratus
ENSCAFG00020002578	-	100	96.078	ENSMOCG00000002138	-	100	96.078	Microtus_ochrogaster
ENSCAFG00020002578	-	100	88.235	ENSMOCG00000001545	Rpl39l	100	88.235	Microtus_ochrogaster
ENSCAFG00020002578	-	100	92.157	MGP_CAROLIEiJ_G0020438	Rpl39l	100	92.157	Mus_caroli
ENSCAFG00020002578	-	100	92.157	ENSMUSG00000039209	Rpl39l	100	92.157	Mus_musculus
ENSCAFG00020002578	-	100	92.157	MGP_SPRETEiJ_G0021332	Rpl39l	100	92.157	Mus_spretus
ENSCAFG00020002578	-	100	88.235	ENSMLUG00000025012	-	100	88.235	Myotis_lucifugus
ENSCAFG00020002578	-	100	90.196	ENSMLUG00000015029	-	100	90.196	Myotis_lucifugus
ENSCAFG00020002578	-	90	86.957	ENSNGAG00000022494	-	96	86.957	Nannospalax_galili
ENSCAFG00020002578	-	100	86.275	ENSNGAG00000008665	-	100	86.275	Nannospalax_galili
ENSCAFG00020002578	-	100	90.196	ENSNGAG00000012570	Rpl39l	100	90.196	Nannospalax_galili
ENSCAFG00020002578	-	100	94.118	ENSODEG00000020114	-	100	94.118	Octodon_degus
ENSCAFG00020002578	-	100	90.196	ENSOGAG00000024799	-	100	90.196	Otolemur_garnettii
ENSCAFG00020002578	-	100	86.275	ENSPPRG00000020779	-	100	86.275	Panthera_pardus
ENSCAFG00020002578	-	100	88.235	ENSPTIG00000006209	-	100	88.235	Panthera_tigris_altaica
ENSCAFG00020002578	-	98	96.000	ENSPANG00000030226	-	100	96.000	Papio_anubis
ENSCAFG00020002578	-	100	92.157	ENSRNOG00000032300	Rpl39l	100	92.157	Rattus_norvegicus
ENSCAFG00020002578	-	100	94.118	ENSRBIG00000010842	-	100	94.118	Rhinopithecus_bieti
ENSCAFG00020002578	-	100	94.118	ENSRROG00000037724	-	100	94.118	Rhinopithecus_roxellana
ENSCAFG00020002578	-	100	96.078	ENSRROG00000023025	-	100	96.078	Rhinopithecus_roxellana
ENSCAFG00020002578	-	100	84.314	ENSSSCG00000033224	-	100	84.314	Sus_scrofa
ENSCAFG00020002578	-	100	90.196	ENSSSCG00000038385	-	69	90.196	Sus_scrofa
ENSCAFG00020002578	-	90	89.130	ENSUAMG00000000067	-	98	89.130	Ursus_americanus
ENSCAFG00020002578	-	100	96.078	ENSUAMG00000020990	-	100	96.078	Ursus_americanus
ENSCAFG00020002578	-	100	96.078	ENSUMAG00000015280	-	100	96.078	Ursus_maritimus
ENSCAFG00020002578	-	100	96.078	ENSVVUG00000030147	-	100	96.078	Vulpes_vulpes
ENSCAFG00020002578	-	98	94.000	ENSVVUG00000022951	-	100	94.000	Vulpes_vulpes
ENSCAFG00020002578	-	100	86.275	ENSVVUG00000014095	-	100	86.275	Vulpes_vulpes