EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAFG00020002584 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Canis_lupus_dingo
Status: putative
Strand: Minus strand
Length: 3361 bases
Position: chrQKWQ01001844.1:10687340-10690700
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00020003081	APOBEC_N	PF08210.11	5.4e-41	1	1
ENSCAFP00020003085	APOBEC_N	PF08210.11	7.4e-41	1	1
ENSCAFP00020003081	APOBEC_C	PF05240.14	2.9e-31	1	1
ENSCAFP00020003085	APOBEC_C	PF05240.14	4.8e-31	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00020003563	-	579	-	ENSCAFP00020003081	192 (aa)	-	-
ENSCAFT00020003573	-	642	-	ENSCAFP00020003085	213 (aa)	-	-

Gene Model

Click here to download ENSCAFG00020002584's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00020002584's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAFG00020002584	-	97	31.937	ENSCAFG00020003515	AICDA	88	32.203
ENSCAFG00020002584	-	93	32.995	ENSCAFG00020002641	-	87	30.769
ENSCAFG00020002584	-	92	31.183	ENSCAFG00020002615	-	96	31.351
ENSCAFG00020002584	-	92	37.640	ENSCAFG00020002661	-	87	32.367

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00020002584	-	96	45.026	ENSG00000100298	APOBEC3H	99	46.154	Homo_sapiens
ENSCAFG00020002584	-	92	61.749	ENSAMEG00000010818	-	82	62.431	Ailuropoda_melanoleuca
ENSCAFG00020002584	-	91	52.717	ENSANAG00000025410	APOBEC3H	96	48.131	Aotus_nancymaae
ENSCAFG00020002584	-	92	57.386	ENSBTAG00000007755	APOBEC3H	94	57.386	Bos_taurus
ENSCAFG00020002584	-	91	51.955	ENSCJAG00000012524	APOBEC3H	91	51.381	Callithrix_jacchus
ENSCAFG00020002584	-	92	97.740	ENSCAFG00000001361	APOBEC3Z3	93	97.740	Canis_familiaris
ENSCAFG00020002584	-	94	56.906	ENSCHIG00000026580	-	96	56.906	Capra_hircus
ENSCAFG00020002584	-	90	53.179	ENSTSYG00000032894	-	99	53.179	Carlito_syrichta
ENSCAFG00020002584	-	92	49.143	ENSCPOG00000009257	-	86	48.603	Cavia_porcellus
ENSCAFG00020002584	-	97	51.020	ENSCCAG00000008525	APOBEC3H	97	51.020	Cebus_capucinus
ENSCAFG00020002584	-	95	50.794	ENSCATG00000030302	APOBEC3H	99	51.111	Cercocebus_atys
ENSCAFG00020002584	-	91	49.153	ENSCLAG00000016615	-	89	48.889	Chinchilla_lanigera
ENSCAFG00020002584	-	94	49.730	ENSCSAG00000006371	APOBEC3H	95	47.500	Chlorocebus_sabaeus
ENSCAFG00020002584	-	92	50.000	ENSCGRG00001022976	Apobec3	83	50.000	Cricetulus_griseus_chok1gshd
ENSCAFG00020002584	-	92	50.000	ENSCGRG00000005621	Apobec3	83	50.000	Cricetulus_griseus_crigri
ENSCAFG00020002584	-	99	51.124	ENSDORG00000027271	-	92	51.124	Dipodomys_ordii
ENSCAFG00020002584	-	92	56.742	ENSECAG00000007726	APOBEC3H	76	56.571	Equus_caballus
ENSCAFG00020002584	-	94	64.641	ENSFCAG00000005251	APOBEC3Z3	95	63.388	Felis_catus
ENSCAFG00020002584	-	93	49.724	ENSSTOG00000007125	-	87	49.724	Ictidomys_tridecemlineatus
ENSCAFG00020002584	-	91	49.635	ENSJJAG00000016840	-	82	49.635	Jaculus_jaculus
ENSCAFG00020002584	-	96	49.133	ENSLAFG00000027404	-	96	49.133	Loxodonta_africana
ENSCAFG00020002584	-	94	49.730	ENSMFAG00000031827	APOBEC3H	95	47.739	Macaca_fascicularis
ENSCAFG00020002584	-	91	51.111	ENSMMUG00000001016	APOBEC3H	95	48.744	Macaca_mulatta
ENSCAFG00020002584	-	94	49.730	ENSMNEG00000039259	APOBEC3H	95	47.739	Macaca_nemestrina
ENSCAFG00020002584	-	94	50.811	ENSMLEG00000033417	APOBEC3H	95	48.500	Mandrillus_leucophaeus
ENSCAFG00020002584	-	93	50.282	ENSMAUG00000011683	Apobec3	89	50.282	Mesocricetus_auratus
ENSCAFG00020002584	-	91	50.000	ENSMOCG00000021576	Apobec3	87	49.143	Microtus_ochrogaster
ENSCAFG00020002584	-	94	45.355	MGP_CAROLIEiJ_G0020029	Apobec3	98	40.964	Mus_caroli
ENSCAFG00020002584	-	100	47.283	ENSMUSG00000009585	Apobec3	100	51.000	Mus_musculus
ENSCAFG00020002584	-	94	44.624	MGP_PahariEiJ_G0020031	-	90	44.199	Mus_pahari
ENSCAFG00020002584	-	99	46.857	MGP_SPRETEiJ_G0020927	Apobec3	98	42.169	Mus_spretus
ENSCAFG00020002584	-	96	67.614	ENSMPUG00000013239	-	86	67.614	Mustela_putorius_furo
ENSCAFG00020002584	-	92	49.711	ENSNGAG00000018998	Apobec3	94	49.162	Nannospalax_galili
ENSCAFG00020002584	-	94	46.486	ENSNLEG00000015218	-	95	45.000	Nomascus_leucogenys
ENSCAFG00020002584	-	91	39.773	ENSOCUG00000023913	-	87	39.773	Oryctolagus_cuniculus
ENSCAFG00020002584	-	94	56.906	ENSOARG00000016290	APOBEC3F	97	56.906	Ovis_aries
ENSCAFG00020002584	-	96	46.597	ENSPPAG00000036522	APOBEC3H	99	48.352	Pan_paniscus
ENSCAFG00020002584	-	92	67.416	ENSPPRG00000003941	-	95	65.761	Panthera_pardus
ENSCAFG00020002584	-	92	32.432	ENSPPRG00000003675	-	94	32.432	Panthera_pardus
ENSCAFG00020002584	-	92	67.416	ENSPTIG00000010283	-	95	65.761	Panthera_tigris_altaica
ENSCAFG00020002584	-	96	46.597	ENSPTRG00000014390	APOBEC3H	99	48.352	Pan_troglodytes
ENSCAFG00020002584	-	91	50.000	ENSPANG00000010774	APOBEC3H	95	47.802	Papio_anubis
ENSCAFG00020002584	-	91	49.162	ENSPEMG00000000456	Apobec3	79	48.649	Peromyscus_maniculatus_bairdii
ENSCAFG00020002584	-	92	46.703	ENSPPYG00000011834	-	95	44.500	Pongo_abelii
ENSCAFG00020002584	-	89	49.708	ENSPCAG00000015655	-	97	49.708	Procavia_capensis
ENSCAFG00020002584	-	68	36.154	ENSPVAG00000024161	-	98	36.154	Pteropus_vampyrus
ENSCAFG00020002584	-	92	52.247	ENSPVAG00000009462	-	100	52.247	Pteropus_vampyrus
ENSCAFG00020002584	-	68	35.385	ENSPVAG00000024267	-	98	35.385	Pteropus_vampyrus
ENSCAFG00020002584	-	99	44.624	ENSRNOG00000016852	Apobec3	93	44.624	Rattus_norvegicus
ENSCAFG00020002584	-	95	47.619	ENSRBIG00000029088	APOBEC3H	95	47.619	Rhinopithecus_bieti
ENSCAFG00020002584	-	94	48.649	ENSRROG00000024699	APOBEC3H	95	46.500	Rhinopithecus_roxellana
ENSCAFG00020002584	-	91	52.747	ENSSBOG00000030005	APOBEC3H	99	52.747	Saimiri_boliviensis_boliviensis
ENSCAFG00020002584	-	96	59.659	ENSSSCG00000000091	APOBEC3B	84	59.659	Sus_scrofa
ENSCAFG00020002584	-	88	53.254	ENSTBEG00000001532	-	99	53.254	Tupaia_belangeri
ENSCAFG00020002584	-	92	58.192	ENSTTRG00000001266	-	99	58.523	Tursiops_truncatus
ENSCAFG00020002584	-	95	59.474	ENSUAMG00000004427	-	86	59.474	Ursus_americanus
ENSCAFG00020002584	-	92	63.483	ENSUMAG00000014435	-	92	63.483	Ursus_maritimus
ENSCAFG00020002584	-	66	59.055	ENSVPAG00000011108	-	99	59.055	Vicugna_pacos
ENSCAFG00020002584	-	94	92.029	ENSVVUG00000014624	-	62	92.029	Vulpes_vulpes