EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAFG00020002615 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Canis_lupus_dingo
Status: putative
Strand: Minus strand
Length: 4306 bases
Position: chrQKWQ01001844.1:10696635-10700940
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00020003112	APOBEC_N	PF08210.11	3.6e-43	1	1
ENSCAFP00020003112	APOBEC_C	PF05240.14	8.4e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00020003610	-	573	-	ENSCAFP00020003112	190 (aa)	-	-

Gene Model

Click here to download ENSCAFG00020002615's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00020002615's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAFG00020002615	-	65	43.200	ENSCAFG00020002641	-	53	43.200
ENSCAFG00020002615	-	92	38.983	ENSCAFG00020003515	AICDA	85	38.983
ENSCAFG00020002615	-	81	33.333	ENSCAFG00020008306	APOBEC2	66	34.839
ENSCAFG00020002615	-	96	31.351	ENSCAFG00020002584	-	92	31.183
ENSCAFG00020002615	-	65	44.000	ENSCAFG00020002661	-	53	44.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00020002615	-	99	48.128	ENSG00000128394	APOBEC3F	99	48.128	Homo_sapiens
ENSCAFG00020002615	-	99	47.368	ENSG00000244509	APOBEC3C	98	47.368	Homo_sapiens
ENSCAFG00020002615	-	99	47.594	ENSG00000243811	APOBEC3D	99	47.594	Homo_sapiens
ENSCAFG00020002615	-	99	48.649	ENSANAG00000030088	-	93	47.895	Aotus_nancymaae
ENSCAFG00020002615	-	67	52.273	ENSCJAG00000015317	-	99	52.273	Callithrix_jacchus
ENSCAFG00020002615	-	100	45.161	ENSTSYG00000034260	-	99	45.161	Carlito_syrichta
ENSCAFG00020002615	-	97	46.277	ENSTSYG00000028254	-	99	46.277	Carlito_syrichta
ENSCAFG00020002615	-	97	40.212	ENSTSYG00000030036	-	99	40.212	Carlito_syrichta
ENSCAFG00020002615	-	87	51.515	ENSCCAG00000030932	-	73	51.515	Cebus_capucinus
ENSCAFG00020002615	-	99	51.634	ENSCATG00000033502	-	99	46.597	Cercocebus_atys
ENSCAFG00020002615	-	99	46.842	ENSCATG00000043226	APOBEC3C	98	46.842	Cercocebus_atys
ENSCAFG00020002615	-	98	47.059	ENSCSAG00000006382	APOBEC3F	98	47.059	Chlorocebus_sabaeus
ENSCAFG00020002615	-	99	47.895	ENSCSAG00000006402	APOBEC3C	98	47.895	Chlorocebus_sabaeus
ENSCAFG00020002615	-	99	48.421	ENSCANG00000039177	APOBEC3C	98	48.421	Colobus_angolensis_palliatus
ENSCAFG00020002615	-	99	47.594	ENSCANG00000031957	-	99	47.594	Colobus_angolensis_palliatus
ENSCAFG00020002615	-	99	47.594	ENSCANG00000032904	-	99	47.594	Colobus_angolensis_palliatus
ENSCAFG00020002615	-	98	44.022	ENSCANG00000033269	-	98	45.109	Colobus_angolensis_palliatus
ENSCAFG00020002615	-	97	38.710	ENSDNOG00000044642	-	94	38.710	Dasypus_novemcinctus
ENSCAFG00020002615	-	98	40.909	ENSEASG00005018641	-	96	40.909	Equus_asinus_asinus
ENSCAFG00020002615	-	98	44.865	ENSECAG00000006071	-	99	44.865	Equus_caballus
ENSCAFG00020002615	-	99	48.128	ENSGGOG00000038678	APOBEC3F	99	48.128	Gorilla_gorilla
ENSCAFG00020002615	-	99	46.316	ENSGGOG00000036587	-	98	46.316	Gorilla_gorilla
ENSCAFG00020002615	-	98	44.385	ENSHGLG00000017315	-	82	44.385	Heterocephalus_glaber_female
ENSCAFG00020002615	-	98	43.316	ENSHGLG00100003105	-	93	43.316	Heterocephalus_glaber_male
ENSCAFG00020002615	-	99	50.802	ENSMFAG00000002331	-	94	50.802	Macaca_fascicularis
ENSCAFG00020002615	-	99	46.524	ENSMFAG00000004037	APOBEC3F	99	46.524	Macaca_fascicularis
ENSCAFG00020002615	-	99	46.316	ENSMFAG00000016792	APOBEC3C	98	46.316	Macaca_fascicularis
ENSCAFG00020002615	-	98	45.989	ENSMMUG00000004018	APOBEC3C	95	45.989	Macaca_mulatta
ENSCAFG00020002615	-	99	50.802	ENSMMUG00000004017	APOBEC3F	99	50.802	Macaca_mulatta
ENSCAFG00020002615	-	99	45.263	ENSMNEG00000045196	APOBEC3C	98	45.263	Macaca_nemestrina
ENSCAFG00020002615	-	99	50.802	ENSMNEG00000043316	APOBEC3D	96	48.889	Macaca_nemestrina
ENSCAFG00020002615	-	99	47.368	ENSMLEG00000036992	APOBEC3C	98	47.368	Mandrillus_leucophaeus
ENSCAFG00020002615	-	99	45.989	ENSMLEG00000029642	APOBEC3F	94	45.989	Mandrillus_leucophaeus
ENSCAFG00020002615	-	99	45.833	ENSMICG00000042615	-	90	45.833	Microcebus_murinus
ENSCAFG00020002615	-	98	43.005	ENSMLUG00000023676	-	99	43.005	Myotis_lucifugus
ENSCAFG00020002615	-	99	41.711	ENSNLEG00000035811	-	94	41.711	Nomascus_leucogenys
ENSCAFG00020002615	-	99	47.917	ENSNLEG00000028392	APOBEC3C	98	47.917	Nomascus_leucogenys
ENSCAFG00020002615	-	100	41.053	ENSOGAG00000030300	-	98	41.053	Otolemur_garnettii
ENSCAFG00020002615	-	98	40.000	ENSOGAG00000033404	-	93	40.000	Otolemur_garnettii
ENSCAFG00020002615	-	98	40.107	ENSOGAG00000032498	-	98	40.107	Otolemur_garnettii
ENSCAFG00020002615	-	99	47.368	ENSPPAG00000028218	-	98	47.594	Pan_paniscus
ENSCAFG00020002615	-	99	46.316	ENSPPAG00000014118	APOBEC3C	98	46.316	Pan_paniscus
ENSCAFG00020002615	-	98	58.824	ENSPPRG00000003726	-	97	58.824	Panthera_pardus
ENSCAFG00020002615	-	99	48.128	ENSPTRG00000014385	APOBEC3C	99	48.128	Pan_troglodytes
ENSCAFG00020002615	-	99	47.594	ENSPTRG00000041588	APOBEC3D	99	47.594	Pan_troglodytes
ENSCAFG00020002615	-	99	46.524	ENSPANG00000010775	APOBEC3F	98	45.789	Papio_anubis
ENSCAFG00020002615	-	99	47.895	ENSPPYG00000011832	APOBEC3C	98	47.895	Pongo_abelii
ENSCAFG00020002615	-	72	44.928	ENSPCOG00000018072	-	99	44.928	Propithecus_coquereli
ENSCAFG00020002615	-	68	43.511	ENSPCOG00000022067	-	98	43.511	Propithecus_coquereli
ENSCAFG00020002615	-	84	59.459	ENSPVAG00000009461	-	65	59.459	Pteropus_vampyrus
ENSCAFG00020002615	-	98	47.486	ENSRBIG00000042297	-	99	47.170	Rhinopithecus_bieti
ENSCAFG00020002615	-	99	50.000	ENSRBIG00000030323	-	98	50.000	Rhinopithecus_bieti
ENSCAFG00020002615	-	99	50.265	ENSRBIG00000030834	-	94	50.532	Rhinopithecus_bieti
ENSCAFG00020002615	-	99	50.265	ENSRROG00000028557	-	94	50.532	Rhinopithecus_roxellana
ENSCAFG00020002615	-	99	50.000	ENSRROG00000029045	APOBEC3C	98	50.000	Rhinopithecus_roxellana
ENSCAFG00020002615	-	98	46.927	ENSRROG00000029996	-	95	46.927	Rhinopithecus_roxellana
ENSCAFG00020002615	-	93	49.432	ENSSBOG00000032780	-	94	50.292	Saimiri_boliviensis_boliviensis
ENSCAFG00020002615	-	96	60.656	ENSUAMG00000004433	-	99	60.656	Ursus_americanus
ENSCAFG00020002615	-	99	60.106	ENSUMAG00000014441	-	86	60.106	Ursus_maritimus
ENSCAFG00020002615	-	79	90.667	ENSVVUG00000014628	-	91	91.096	Vulpes_vulpes