EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAFG00020002641 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Canis_lupus_dingo
Status: putative
Strand: Minus strand
Length: 9622 bases
Position: chrQKWQ01001844.1:10710662-10720283
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00020003136	APOBEC_N	PF08210.11	2.4e-37	1	1
ENSCAFP00020003136	APOBEC_C	PF05240.14	4.4e-28	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00020003640	-	696	-	ENSCAFP00020003136	231 (aa)	-	-

Gene Model

Click here to download ENSCAFG00020002641's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00020002641's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAFG00020002641	-	100	97.403	ENSCAFG00020002661	-	100	97.403
ENSCAFG00020002641	-	78	32.020	ENSCAFG00020008306	APOBEC2	78	32.353
ENSCAFG00020002641	-	80	36.316	ENSCAFG00020003515	AICDA	88	36.316
ENSCAFG00020002641	-	53	43.200	ENSCAFG00020002615	-	65	43.200
ENSCAFG00020002641	-	87	30.769	ENSCAFG00020002584	-	93	32.995

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00020002641	-	81	43.627	ENSG00000239713	APOBEC3G	79	45.263	Homo_sapiens
ENSCAFG00020002641	-	84	51.707	ENSAMEG00000010815	-	85	51.961	Ailuropoda_melanoleuca
ENSCAFG00020002641	-	81	46.907	ENSANAG00000031271	APOBEC3G	87	46.907	Aotus_nancymaae
ENSCAFG00020002641	-	81	43.158	ENSANAG00000028416	-	97	43.158	Aotus_nancymaae
ENSCAFG00020002641	-	84	46.970	ENSANAG00000020573	-	98	45.500	Aotus_nancymaae
ENSCAFG00020002641	-	78	43.169	ENSANAG00000027961	-	96	44.262	Aotus_nancymaae
ENSCAFG00020002641	-	80	48.404	ENSBTAG00000037800	-	98	47.872	Bos_taurus
ENSCAFG00020002641	-	81	46.875	ENSCJAG00000023368	APOBEC3G	96	47.423	Callithrix_jacchus
ENSCAFG00020002641	-	78	45.161	ENSCJAG00000011578	-	73	44.149	Callithrix_jacchus
ENSCAFG00020002641	-	54	99.194	ENSCAFG00000023589	-	89	99.194	Canis_familiaris
ENSCAFG00020002641	-	81	84.184	ENSCAFG00000015211	-	63	84.293	Canis_familiaris
ENSCAFG00020002641	-	84	47.475	ENSCHIG00000012694	-	94	48.205	Capra_hircus
ENSCAFG00020002641	-	81	45.128	ENSCCAG00000033147	-	93	45.128	Cebus_capucinus
ENSCAFG00020002641	-	84	46.970	ENSCCAG00000030928	-	95	46.535	Cebus_capucinus
ENSCAFG00020002641	-	81	46.392	ENSCCAG00000032232	-	86	46.392	Cebus_capucinus
ENSCAFG00020002641	-	81	42.268	ENSCCAG00000032509	-	98	42.268	Cebus_capucinus
ENSCAFG00020002641	-	85	38.764	ENSCSAG00000006376	APOBEC3G	72	38.764	Chlorocebus_sabaeus
ENSCAFG00020002641	-	81	35.938	ENSDNOG00000039749	-	80	35.417	Dasypus_novemcinctus
ENSCAFG00020002641	-	80	51.064	ENSEASG00005018643	-	79	48.958	Equus_asinus_asinus
ENSCAFG00020002641	-	88	46.117	ENSECAG00000022371	APOBEC3Z1B	89	45.238	Equus_caballus
ENSCAFG00020002641	-	87	49.505	ENSECAG00000032756	-	69	48.276	Equus_caballus
ENSCAFG00020002641	-	81	40.609	ENSGGOG00000013750	APOBEC3G	95	42.077	Gorilla_gorilla
ENSCAFG00020002641	-	84	41.753	ENSLAFG00000020906	-	94	41.206	Loxodonta_africana
ENSCAFG00020002641	-	80	44.845	ENSLAFG00000005275	-	98	44.845	Loxodonta_africana
ENSCAFG00020002641	-	82	44.560	ENSLAFG00000008890	-	91	43.005	Loxodonta_africana
ENSCAFG00020002641	-	84	45.960	ENSMFAG00000044711	APOBEC3G	87	46.701	Macaca_fascicularis
ENSCAFG00020002641	-	84	45.000	ENSMMUG00000039346	APOBEC3G	94	45.500	Macaca_mulatta
ENSCAFG00020002641	-	84	45.960	ENSMNEG00000038847	APOBEC3G	94	45.500	Macaca_nemestrina
ENSCAFG00020002641	-	84	43.925	ENSMLEG00000024444	APOBEC3G	82	44.000	Mandrillus_leucophaeus
ENSCAFG00020002641	-	82	44.898	ENSMICG00000043748	-	95	45.455	Microcebus_murinus
ENSCAFG00020002641	-	80	42.408	ENSMICG00000047191	-	98	42.553	Microcebus_murinus
ENSCAFG00020002641	-	80	50.000	ENSMPUG00000013235	-	93	48.913	Mustela_putorius_furo
ENSCAFG00020002641	-	78	36.170	ENSMLUG00000028652	-	82	35.714	Myotis_lucifugus
ENSCAFG00020002641	-	87	42.568	ENSMLUG00000008631	-	97	42.568	Myotis_lucifugus
ENSCAFG00020002641	-	79	38.798	ENSMLUG00000000517	-	100	38.798	Myotis_lucifugus
ENSCAFG00020002641	-	74	37.714	ENSMLUG00000026771	-	66	43.810	Myotis_lucifugus
ENSCAFG00020002641	-	81	36.702	ENSMLUG00000023022	-	83	37.173	Myotis_lucifugus
ENSCAFG00020002641	-	85	42.105	ENSMLUG00000024853	-	100	42.105	Myotis_lucifugus
ENSCAFG00020002641	-	81	40.212	ENSMLUG00000024957	-	85	39.153	Myotis_lucifugus
ENSCAFG00020002641	-	84	39.175	ENSMLUG00000014565	-	100	39.175	Myotis_lucifugus
ENSCAFG00020002641	-	81	40.984	ENSMLUG00000000977	-	95	40.984	Myotis_lucifugus
ENSCAFG00020002641	-	79	44.186	ENSNLEG00000018922	-	95	44.186	Nomascus_leucogenys
ENSCAFG00020002641	-	80	37.234	ENSOPRG00000002326	-	98	37.234	Ochotona_princeps
ENSCAFG00020002641	-	71	40.120	ENSOCUG00000023532	-	63	40.120	Oryctolagus_cuniculus
ENSCAFG00020002641	-	81	43.434	ENSOGAG00000024822	-	93	43.367	Otolemur_garnettii
ENSCAFG00020002641	-	81	46.842	ENSOGAG00000032518	-	97	46.875	Otolemur_garnettii
ENSCAFG00020002641	-	80	48.677	ENSOARG00000016213	APOBEC3Z1	98	46.277	Ovis_aries
ENSCAFG00020002641	-	81	42.927	ENSPPAG00000033277	-	74	44.503	Pan_paniscus
ENSCAFG00020002641	-	84	42.254	ENSPTRG00000014387	APOBEC3G	80	43.719	Pan_troglodytes
ENSCAFG00020002641	-	84	43.216	ENSPPYG00000011833	APOBEC3G	90	43.216	Pongo_abelii
ENSCAFG00020002641	-	81	42.400	ENSPCAG00000015518	-	66	42.400	Procavia_capensis
ENSCAFG00020002641	-	54	45.600	ENSPCAG00000001848	-	91	45.600	Procavia_capensis
ENSCAFG00020002641	-	79	40.796	ENSPCOG00000016357	-	90	42.553	Propithecus_coquereli
ENSCAFG00020002641	-	83	47.120	ENSPVAG00000004045	-	95	47.120	Pteropus_vampyrus
ENSCAFG00020002641	-	84	44.776	ENSRBIG00000035436	APOBEC3G	90	45.274	Rhinopithecus_bieti
ENSCAFG00020002641	-	84	49.000	ENSSBOG00000029091	-	95	47.525	Saimiri_boliviensis_boliviensis
ENSCAFG00020002641	-	81	47.423	ENSSBOG00000026566	-	97	47.423	Saimiri_boliviensis_boliviensis
ENSCAFG00020002641	-	80	48.168	ENSSBOG00000021384	-	95	48.168	Saimiri_boliviensis_boliviensis
ENSCAFG00020002641	-	80	46.316	ENSSBOG00000018208	-	98	46.316	Saimiri_boliviensis_boliviensis
ENSCAFG00020002641	-	81	46.907	ENSSBOG00000023468	-	77	46.907	Saimiri_boliviensis_boliviensis
ENSCAFG00020002641	-	81	43.750	ENSSBOG00000025673	-	87	44.271	Saimiri_boliviensis_boliviensis
ENSCAFG00020002641	-	82	50.526	ENSTTRG00000009395	-	94	50.265	Tursiops_truncatus
ENSCAFG00020002641	-	81	52.332	ENSUMAG00000014447	-	94	52.332	Ursus_maritimus
ENSCAFG00020002641	-	84	52.500	ENSUMAG00000002249	-	91	49.510	Ursus_maritimus